RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 SNRNP27Q8WVK2 155 aaKnown RBP4.16□□□□□ -1.74
MCF2-210ENST00000536274 TEKT4Q8WW24 435 aa4.16□□□□□ -1.74
MCF2-210ENST00000536274 TBC1D2BQ9UPU7 963 aa4.16□□□□□ -1.74
MCF2-210ENST00000536274 C15orf41Q9Y2V0 281 aa4.16□□□□□ -1.74
MCF2-210ENST00000536274 RGPD2P0DJD1 1756 aa4.16□□□□□ -1.74
MCF2-210ENST00000536274 ESYT3A0FGR9 886 aa4.15□□□□□ -1.74
MCF2-210ENST00000536274 CTAGE9A4FU28 777 aa4.15□□□□□ -1.74
MCF2-210ENST00000536274 ZSCAN5CA6NGD5 496 aaPredicted RBP4.15□□□□□ -1.74
MCF2-210ENST00000536274 B4DLN1 442 aa4.15□□□□□ -1.74
MCF2-210ENST00000536274 PDE2AO00408 941 aaPredicted RBP4.15□□□□□ -1.74
MCF2-210ENST00000536274 IMPDH2P12268 514 aa4.15□□□□□ -1.74
MCF2-210ENST00000536274 INHBCP55103 352 aa4.15□□□□□ -1.74
MCF2-210ENST00000536274 MXRA7P84157 204 aa4.15□□□□□ -1.74
MCF2-210ENST00000536274 RNASELQ05823 741 aaKnown RBP4.15□□□□□ -1.74
MCF2-210ENST00000536274 FSTL1Q12841 308 aa4.15□□□□□ -1.74
MCF2-210ENST00000536274 FAM133BQ5BKY9 247 aaKnown RBP4.15□□□□□ -1.74
MCF2-210ENST00000536274 ANKRD20A8PQ5CZ79 823 aa4.15□□□□□ -1.74
MCF2-210ENST00000536274 ACBD5Q5T8D3 534 aaPredicted RBP4.15□□□□□ -1.74
MCF2-210ENST00000536274 TCERG1LQ5VWI1 586 aa4.15□□□□□ -1.74
MCF2-210ENST00000536274 B4GALNT4Q76KP1 1039 aa4.15□□□□□ -1.74
MCF2-210ENST00000536274 DDX46Q7L014 1031 aaKnown RBP4.15□□□□□ -1.74
MCF2-210ENST00000536274 KIF2BQ8N4N8 673 aa4.15□□□□□ -1.74
MCF2-210ENST00000536274 SH3GL2Q99962 352 aa4.15□□□□□ -1.74
MCF2-210ENST00000536274 NCOA5Q9HCD5 579 aaKnown RBP4.15□□□□□ -1.74
MCF2-210ENST00000536274 KIAA1468Q9P260 1216 aa4.15□□□□□ -1.74
MCF2-210ENST00000536274 DMGDHQ9UI17 866 aaKnown RBP4.15□□□□□ -1.74
MCF2-210ENST00000536274 HOOK1Q9UJC3 728 aaKnown RBP4.15□□□□□ -1.74
MCF2-210ENST00000536274 GUCA1BQ9UMX6 200 aa4.15□□□□□ -1.74
MCF2-210ENST00000536274 PCDHA7Q9UN72 937 aa4.15□□□□□ -1.74
MCF2-210ENST00000536274 CYP46A1Q9Y6A2 500 aa4.15□□□□□ -1.74
MCF2-210ENST00000536274 PNPLA7Q6ZV29 1317 aa4.15□□□□□ -1.74
MCF2-210ENST00000536274 KDRP35968 1356 aa4.15□□□□□ -1.74
MCF2-210ENST00000536274 PHF20L1A8MW92 1017 aa4.15□□□□□ -1.75
MCF2-210ENST00000536274 TMCO5BA8MYB1 307 aa4.15□□□□□ -1.75
MCF2-210ENST00000536274 MBD4O95243 580 aa4.15□□□□□ -1.75
MCF2-210ENST00000536274 ATP1A1P05023 1023 aaKnown RBP4.15□□□□□ -1.75
MCF2-210ENST00000536274 FESP07332 822 aa4.15□□□□□ -1.75
MCF2-210ENST00000536274 ZNF24P17028 368 aa4.15□□□□□ -1.75
MCF2-210ENST00000536274 HSPA6P17066 643 aa4.15□□□□□ -1.75
MCF2-210ENST00000536274 MARCKSP29966 332 aaPredicted RBP4.15□□□□□ -1.75
MCF2-210ENST00000536274 ARHGAP25P42331 645 aa4.15□□□□□ -1.75
MCF2-210ENST00000536274 SLC8A3P57103 927 aa4.15□□□□□ -1.75
MCF2-210ENST00000536274 NNTQ13423 1086 aa4.15□□□□□ -1.75
MCF2-210ENST00000536274 TRADDQ15628 312 aa4.15□□□□□ -1.75
MCF2-210ENST00000536274 OR2W6PQ8NHA6 318 aa4.15□□□□□ -1.75
MCF2-210ENST00000536274 SPIRE2Q8WWL2 714 aa4.15□□□□□ -1.75
MCF2-210ENST00000536274 IP6K1Q92551 441 aa4.15□□□□□ -1.75
MCF2-210ENST00000536274 CUL5Q93034 780 aa4.15□□□□□ -1.75
MCF2-210ENST00000536274 SYT15Q9BQS2 421 aa4.15□□□□□ -1.75
MCF2-210ENST00000536274 NLRP2Q9NX02 1062 aa4.15□□□□□ -1.75
MCF2-210ENST00000536274 ZMYND8Q9ULU4 1186 aaPredicted RBP4.15□□□□□ -1.75
MCF2-210ENST00000536274 STK38LQ9Y2H1 464 aa4.15□□□□□ -1.75
MCF2-210ENST00000536274 CLIC4Q9Y696 253 aa4.15□□□□□ -1.75
MCF2-210ENST00000536274 SCN11AQ9UI33 1791 aa4.15□□□□□ -1.75
MCF2-210ENST00000536274 A0A1W2PP64 1363 aa4.15□□□□□ -1.75
MCF2-210ENST00000536274 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.15□□□□□ -1.75
MCF2-210ENST00000536274 RNF225M0QZC1 329 aaPredicted RBP4.15□□□□□ -1.75
MCF2-210ENST00000536274 KIF5CO60282 957 aa4.15□□□□□ -1.75
MCF2-210ENST00000536274 ETS2P15036 469 aa4.15□□□□□ -1.75
MCF2-210ENST00000536274 CYP11B2P19099 503 aa4.15□□□□□ -1.75
MCF2-210ENST00000536274 ALDH1B1P30837 517 aa4.15□□□□□ -1.75
MCF2-210ENST00000536274 RFC5P40937 340 aa4.15□□□□□ -1.75
MCF2-210ENST00000536274 USP14P54578 494 aa4.15□□□□□ -1.75
MCF2-210ENST00000536274 KCNJ2P63252 427 aa4.15□□□□□ -1.75
MCF2-210ENST00000536274 BYSLQ13895 437 aaKnown RBP4.15□□□□□ -1.75
MCF2-210ENST00000536274 ENOX2Q16206 610 aaKnown RBP4.15□□□□□ -1.75
MCF2-210ENST00000536274 HLFQ16534 295 aa4.15□□□□□ -1.75
MCF2-210ENST00000536274 MSL1Q68DK7 614 aa4.15□□□□□ -1.75
MCF2-210ENST00000536274 CCDC148Q8NFR7 591 aa4.15□□□□□ -1.75
MCF2-210ENST00000536274 RBM46Q8TBY0 533 aaKnown RBP4.15□□□□□ -1.75
MCF2-210ENST00000536274 CLIP3Q96DZ5 547 aa4.15□□□□□ -1.75
MCF2-210ENST00000536274 FAM227BQ96M60 508 aa4.15□□□□□ -1.75
MCF2-210ENST00000536274 ZIM3Q96PE6 472 aa4.15□□□□□ -1.75
MCF2-210ENST00000536274 SLF1Q9BQI6 1058 aa4.15□□□□□ -1.75
MCF2-210ENST00000536274 FHDC1Q9C0D6 1143 aaPredicted RBP4.15□□□□□ -1.75
MCF2-210ENST00000536274 LRRC4CQ9HCJ2 640 aa4.15□□□□□ -1.75
MCF2-210ENST00000536274 SAMSN1Q9NSI8 373 aaKnown RBP4.15□□□□□ -1.75
MCF2-210ENST00000536274 GALNT8Q9NY28 637 aa4.15□□□□□ -1.75
MCF2-210ENST00000536274 PLA2G2EQ9NZK7 142 aa4.15□□□□□ -1.75
MCF2-210ENST00000536274 TRIM33Q9UPN9 1127 aa4.15□□□□□ -1.75
MCF2-210ENST00000536274 ADGRG1Q9Y653 693 aa4.15□□□□□ -1.75
MCF2-210ENST00000536274 USH1CQ9Y6N9 552 aa4.15□□□□□ -1.75
MCF2-210ENST00000536274 BCORQ6W2J9 1755 aa4.15□□□□□ -1.75
MCF2-210ENST00000536274 NEDD4P46934 1319 aa4.14□□□□□ -1.75
MCF2-210ENST00000536274 IL16Q14005 1332 aa4.14□□□□□ -1.75
MCF2-210ENST00000536274 SBF1O95248 1867 aa4.14□□□□□ -1.75
MCF2-210ENST00000536274 N4BP3O15049 544 aa4.14□□□□□ -1.75
MCF2-210ENST00000536274 NDUFB5O43674 189 aa4.14□□□□□ -1.75
MCF2-210ENST00000536274 AHCYL1O43865 530 aa4.14□□□□□ -1.75
MCF2-210ENST00000536274 GFPT2O94808 682 aa4.14□□□□□ -1.75
MCF2-210ENST00000536274 FAM153BP0C7A2 387 aa4.14□□□□□ -1.75
MCF2-210ENST00000536274 CXCR5P32302 372 aa4.14□□□□□ -1.75
MCF2-210ENST00000536274 DNA2P51530 1060 aa4.14□□□□□ -1.75
MCF2-210ENST00000536274 GUCY2FP51841 1108 aa4.14□□□□□ -1.75
MCF2-210ENST00000536274 BPIFB4P59827 614 aa4.14□□□□□ -1.75
MCF2-210ENST00000536274 RBL2Q08999 1139 aa4.14□□□□□ -1.75
MCF2-210ENST00000536274 TOB2Q14106 344 aaPredicted RBP4.14□□□□□ -1.75
MCF2-210ENST00000536274 PDIA5Q14554 519 aa4.14□□□□□ -1.75
MCF2-210ENST00000536274 PTGISQ16647 500 aa4.14□□□□□ -1.75
MCF2-210ENST00000536274 FAM153CQ494X1 144 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms