RNA–Protein interactions for RNA: ENST00000535607.5

USP28-202, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 683 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-202ENST00000535607 CGNQ9P2M7 1197 aaKnown RBP7.79□□□□□ -1.16
USP28-202ENST00000535607 STK17AQ9UEE5 414 aa7.79□□□□□ -1.16
USP28-202ENST00000535607 PRKAG2Q9UGJ0 569 aa7.79□□□□□ -1.16
USP28-202ENST00000535607 USP25Q9UHP3 1055 aa7.79□□□□□ -1.16
USP28-202ENST00000535607 STRIP2Q9ULQ0 834 aa7.79□□□□□ -1.16
USP28-202ENST00000535607 EFR3BQ9Y2G0 817 aa7.79□□□□□ -1.16
USP28-202ENST00000535607 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.79□□□□□ -1.16
USP28-202ENST00000535607 CPDO75976 1380 aa7.79□□□□□ -1.16
USP28-202ENST00000535607 SYNGAP1Q96PV0 1343 aa7.78□□□□□ -1.16
USP28-202ENST00000535607 WDR33Q9C0J8 1336 aaKnown RBP7.78□□□□□ -1.16
USP28-202ENST00000535607 PEAK1Q9H792 1746 aa7.78□□□□□ -1.16
USP28-202ENST00000535607 F8W735 103 aaPredicted RBP7.78□□□□□ -1.16
USP28-202ENST00000535607 ERC2O15083 957 aa7.78□□□□□ -1.16
USP28-202ENST00000535607 EPB41L2O43491 1005 aaKnown RBP7.78□□□□□ -1.16
USP28-202ENST00000535607 ZNF862O60290 1169 aa7.78□□□□□ -1.16
USP28-202ENST00000535607 RNGTTO60942 597 aaKnown RBP7.78□□□□□ -1.16
USP28-202ENST00000535607 CTSBP07858 339 aa7.78□□□□□ -1.16
USP28-202ENST00000535607 GARTP22102 1010 aa7.78□□□□□ -1.16
USP28-202ENST00000535607 CCDC183Q5T5S1 534 aa7.78□□□□□ -1.16
USP28-202ENST00000535607 MPRIPQ6WCQ1 1025 aa7.78□□□□□ -1.16
USP28-202ENST00000535607 ZNF771Q7L3S4 317 aaPredicted RBP7.78□□□□□ -1.16
USP28-202ENST00000535607 REC114Q7Z4M0 266 aa7.78□□□□□ -1.16
USP28-202ENST00000535607 AGGF1Q8N302 714 aaeCLIP7.78□□□□□ -1.16
USP28-202ENST00000535607 SMG8Q8ND04 991 aaKnown RBP7.78□□□□□ -1.16
USP28-202ENST00000535607 PLPPR2Q96GM1 343 aa7.78□□□□□ -1.16
USP28-202ENST00000535607 LRRC3Q9BY71 257 aa7.78□□□□□ -1.16
USP28-202ENST00000535607 SUGCTQ9HAC7 445 aa7.78□□□□□ -1.16
USP28-202ENST00000535607 CSADQ9Y600 493 aa7.78□□□□□ -1.16
USP28-202ENST00000535607 PLEKHG2Q9H7P9 1386 aa7.78□□□□□ -1.16
USP28-202ENST00000535607 MAP2P11137 1827 aaKnown RBP7.78□□□□□ -1.16
USP28-202ENST00000535607 RGPD1P0DJD0 1748 aa7.78□□□□□ -1.16
USP28-202ENST00000535607 CAMTA1Q9Y6Y1 1673 aa7.77□□□□□ -1.17
USP28-202ENST00000535607 FAM221AA4D161 298 aa7.77□□□□□ -1.17
USP28-202ENST00000535607 HMMRO75330 724 aa7.77□□□□□ -1.17
USP28-202ENST00000535607 ADH5P11766 374 aa7.77□□□□□ -1.17
USP28-202ENST00000535607 IMPDH2P12268 514 aa7.77□□□□□ -1.17
USP28-202ENST00000535607 LORP23490 312 aaPredicted RBP7.77□□□□□ -1.17
USP28-202ENST00000535607 ANAPC15P60006 121 aa7.77□□□□□ -1.17
USP28-202ENST00000535607 TTC22Q5TAA0 569 aa7.77□□□□□ -1.17
USP28-202ENST00000535607 LRFN4Q6PJG9 635 aa7.77□□□□□ -1.17
USP28-202ENST00000535607 GK5Q6ZS86 529 aa7.77□□□□□ -1.17
USP28-202ENST00000535607 RPAP2Q8IXW5 612 aaPredicted RBP7.77□□□□□ -1.17
USP28-202ENST00000535607 FBXO27Q8NI29 283 aa7.77□□□□□ -1.17
USP28-202ENST00000535607 LRRC59Q96AG4 307 aaKnown RBP7.77□□□□□ -1.17
USP28-202ENST00000535607 WDR89Q96FK6 387 aaPredicted RBP7.77□□□□□ -1.17
USP28-202ENST00000535607 ZHX1Q9UKY1 873 aaPredicted RBP7.77□□□□□ -1.17
USP28-202ENST00000535607 TNNQ9UQP3 1299 aa7.77□□□□□ -1.17
USP28-202ENST00000535607 PAXBP1Q9Y5B6 917 aa7.77□□□□□ -1.17
USP28-202ENST00000535607 LMO7Q8WWI1 1683 aa7.76□□□□□ -1.17
USP28-202ENST00000535607 DLGAP3O95886 979 aa7.76□□□□□ -1.17
USP28-202ENST00000535607 SELPP16109 830 aa7.76□□□□□ -1.17
USP28-202ENST00000535607 ATF4P18848 351 aaPredicted RBP7.76□□□□□ -1.17
USP28-202ENST00000535607 RXRBP28702 533 aa7.76□□□□□ -1.17
USP28-202ENST00000535607 ASPAP45381 313 aa7.76□□□□□ -1.17
USP28-202ENST00000535607 GNAI1P63096 354 aa7.76□□□□□ -1.17
USP28-202ENST00000535607 ERVK-24P63145 666 aa7.76□□□□□ -1.17
USP28-202ENST00000535607 PTPN11Q06124 597 aaPredicted RBP7.76□□□□□ -1.17
USP28-202ENST00000535607 SOX4Q06945 474 aaPredicted RBP7.76□□□□□ -1.17
USP28-202ENST00000535607 C12orf40Q86WS4 652 aa7.76□□□□□ -1.17
USP28-202ENST00000535607 SLITRK4Q8IW52 837 aa7.76□□□□□ -1.17
USP28-202ENST00000535607 KCT2Q8NC54 265 aa7.76□□□□□ -1.17
USP28-202ENST00000535607 GPT2Q8TD30 523 aa7.76□□□□□ -1.17
USP28-202ENST00000535607 BRMS1Q9HCU9 246 aa7.76□□□□□ -1.17
USP28-202ENST00000535607 GINM1Q9NU53 330 aa7.76□□□□□ -1.17
USP28-202ENST00000535607 TACC3Q9Y6A5 838 aa7.76□□□□□ -1.17
USP28-202ENST00000535607 COL14A1Q05707 1796 aaKnown RBP7.76□□□□□ -1.17
USP28-202ENST00000535607 AK9Q5TCS8 1911 aa7.76□□□□□ -1.17
USP28-202ENST00000535607 JCADQ9P266 1359 aa7.75□□□□□ -1.17
USP28-202ENST00000535607 TM4SF5O14894 197 aa7.75□□□□□ -1.17
USP28-202ENST00000535607 U2SURPO15042 1029 aaKnown RBP7.75□□□□□ -1.17
USP28-202ENST00000535607 GRIN3BO60391 1043 aa7.75□□□□□ -1.17
USP28-202ENST00000535607 STK10O94804 968 aaKnown RBP7.75□□□□□ -1.17
USP28-202ENST00000535607 PLCG1P19174 1290 aa7.75□□□□□ -1.17
USP28-202ENST00000535607 COL8A1P27658 744 aa7.75□□□□□ -1.17
USP28-202ENST00000535607 IREB2P48200 963 aaKnown RBP7.75□□□□□ -1.17
USP28-202ENST00000535607 CHMP4BP1P59074 171 aa7.75□□□□□ -1.17
USP28-202ENST00000535607 CBX1P83916 185 aa7.75□□□□□ -1.17
USP28-202ENST00000535607 INPP5AQ14642 412 aa7.75□□□□□ -1.17
USP28-202ENST00000535607 ZC3H12AQ5D1E8 599 aaKnown RBP7.75□□□□□ -1.17
USP28-202ENST00000535607 REXO1Q8N1G1 1221 aaKnown RBP7.75□□□□□ -1.17
USP28-202ENST00000535607 WFDC12Q8WWY7 111 aa7.75□□□□□ -1.17
USP28-202ENST00000535607 TSR2Q969E8 191 aaKnown RBP7.75□□□□□ -1.17
USP28-202ENST00000535607 DCTPP1Q9H773 170 aa7.75□□□□□ -1.17
USP28-202ENST00000535607 PRDM10Q9NQV6 1147 aa7.75□□□□□ -1.17
USP28-202ENST00000535607 CACNA2D2Q9NY47 1150 aa7.75□□□□□ -1.17
USP28-202ENST00000535607 POLKQ9UBT6 870 aa7.75□□□□□ -1.17
USP28-202ENST00000535607 PCDHB14Q9Y5E9 798 aa7.75□□□□□ -1.17
USP28-202ENST00000535607 MAP3K19Q56UN5 1328 aa7.75□□□□□ -1.17
USP28-202ENST00000535607 COL18A1P39060 1754 aa7.74□□□□□ -1.17
USP28-202ENST00000535607 FANCGO15287 622 aa7.74□□□□□ -1.17
USP28-202ENST00000535607 TMPRSS2O15393 492 aa7.74□□□□□ -1.17
USP28-202ENST00000535607 DIAPH1O60610 1272 aaKnown RBP7.74□□□□□ -1.17
USP28-202ENST00000535607 ALX3O95076 343 aa7.74□□□□□ -1.17
USP28-202ENST00000535607 ADCY5O95622 1261 aa7.74□□□□□ -1.17
USP28-202ENST00000535607 GCP02774 474 aa7.74□□□□□ -1.17
USP28-202ENST00000535607 PGRP06401 933 aa7.74□□□□□ -1.17
USP28-202ENST00000535607 MX1P20591 662 aa7.74□□□□□ -1.17
USP28-202ENST00000535607 CRKP46108 304 aa7.74□□□□□ -1.17
USP28-202ENST00000535607 DHX8Q14562 1220 aaKnown RBP7.74□□□□□ -1.17
USP28-202ENST00000535607 LRRFIP1Q32MZ4 808 aaKnown RBP7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms