RNA–Protein interactions for RNA: ENST00000534283.1

RELA-223, Transcript of RELA proto-oncogene, NF-kB subunit, human

TSL 5

Gene RELA, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RELA-223	ENST00000534283	ASB14	A6NK59	587 aa		28.62	■■■□□ 2.17
RELA-223	ENST00000534283	ASGR1	P07306	291 aa		28.62	■■■□□ 2.17
RELA-223	ENST00000534283	C6orf222	P0C671	652 aa	Predicted RBP	28.62	■■■□□ 2.17
RELA-223	ENST00000534283	CCDC96	Q2M329	555 aa		28.62	■■■□□ 2.17
RELA-223	ENST00000534283	TBC1D10C	Q8IV04	446 aa		28.62	■■■□□ 2.17
RELA-223	ENST00000534283	PCSK9	Q8NBP7	692 aa	Known RBP	28.62	■■■□□ 2.17
RELA-223	ENST00000534283	EXOC6	Q8TAG9	804 aa		28.62	■■■□□ 2.17
RELA-223	ENST00000534283	DDX49	Q9Y6V7	483 aa	Known RBP	28.62	■■■□□ 2.17
RELA-223	ENST00000534283	LTBP2	Q14767	1821 aa		28.62	■■■□□ 2.17
RELA-223	ENST00000534283	AKNAD1	Q5T1N1	836 aa		28.61	■■■□□ 2.17
RELA-223	ENST00000534283	SYDE2	Q5VT97	1194 aa		28.61	■■■□□ 2.17
RELA-223	ENST00000534283	SLC17A8	Q8NDX2	589 aa		28.61	■■■□□ 2.17
RELA-223	ENST00000534283	TTC14	Q96N46	770 aa		28.61	■■■□□ 2.17
RELA-223	ENST00000534283	TMEM39A	Q9NV64	488 aa		28.61	■■■□□ 2.17
RELA-223	ENST00000534283	CCPG1	Q9ULG6	757 aa		28.61	■■■□□ 2.17
RELA-223	ENST00000534283	GNE	Q9Y223	722 aa	Known RBP	28.61	■■■□□ 2.17
RELA-223	ENST00000534283	PC	P11498	1178 aa	Known RBP	28.6	■■■□□ 2.17
RELA-223	ENST00000534283	GNAS	Q5JWF2	1037 aa		28.6	■■■□□ 2.17
RELA-223	ENST00000534283	MORC4	Q8TE76	937 aa		28.6	■■■□□ 2.17
RELA-223	ENST00000534283	GLT1D1	Q96MS3	346 aa		28.6	■■■□□ 2.17
RELA-223	ENST00000534283	GUCD1	Q96NT3	240 aa		28.6	■■■□□ 2.17
RELA-223	ENST00000534283	PURB	Q96QR8	312 aa	Known RBP	28.6	■■■□□ 2.17
RELA-223	ENST00000534283	SPC25	Q9HBM1	224 aa		28.6	■■■□□ 2.17
RELA-223	ENST00000534283	TBX21	Q9UL17	535 aa		28.6	■■■□□ 2.17
RELA-223	ENST00000534283	DCDC2C	A8MYV0	355 aa		28.59	■■■□□ 2.17
RELA-223	ENST00000534283	PDHB	P11177	359 aa		28.59	■■■□□ 2.17
RELA-223	ENST00000534283	TNFAIP2	Q03169	654 aa		28.59	■■■□□ 2.17
RELA-223	ENST00000534283	TAPT1	Q6NXT6	567 aa		28.59	■■■□□ 2.17
RELA-223	ENST00000534283	MFSD6	Q6ZSS7	791 aa		28.59	■■■□□ 2.17
RELA-223	ENST00000534283	FRMPD2	Q68DX3	1309 aa	Predicted RBP	28.59	■■■□□ 2.17
RELA-223	ENST00000534283	SNHG28	P0DPA3	235 aa		28.58	■■■□□ 2.17
RELA-223	ENST00000534283	RAG1	P15918	1043 aa		28.58	■■■□□ 2.17
RELA-223	ENST00000534283	GPCPD1	Q9NPB8	672 aa		28.58	■■■□□ 2.17
RELA-223	ENST00000534283	PDGFC	Q9NRA1	345 aa		28.58	■■■□□ 2.17
RELA-223	ENST00000534283	LAMA2	P24043	3122 aa	Known RBP	28.58	■■■□□ 2.17
RELA-223	ENST00000534283	SMPD1	P17405	629 aa		28.57	■■■□□ 2.16
RELA-223	ENST00000534283	PTGS1	P23219	599 aa		28.57	■■■□□ 2.16
RELA-223	ENST00000534283	ZNF543	Q08ER8	600 aa		28.57	■■■□□ 2.16
RELA-223	ENST00000534283	ARVCF	O00192	962 aa		28.56	■■■□□ 2.16
RELA-223	ENST00000534283	MFAP1	P55081	439 aa	Known RBP	28.56	■■■□□ 2.16
RELA-223	ENST00000534283	BEX3	Q00994	111 aa		28.56	■■■□□ 2.16
RELA-223	ENST00000534283	BAAT	Q14032	418 aa	Predicted RBP	28.56	■■■□□ 2.16
RELA-223	ENST00000534283	TMEM63B	Q5T3F8	832 aa		28.56	■■■□□ 2.16
RELA-223	ENST00000534283	NSMF	Q6X4W1	530 aa		28.56	■■■□□ 2.16
RELA-223	ENST00000534283	CLEC4D	Q8WXI8	215 aa		28.56	■■■□□ 2.16
RELA-223	ENST00000534283	NEDD4	P46934	1319 aa		28.55	■■■□□ 2.16
RELA-223	ENST00000534283	NFIB	O00712	420 aa		28.55	■■■□□ 2.16
RELA-223	ENST00000534283	TIMP1	P01033	207 aa		28.55	■■■□□ 2.16
RELA-223	ENST00000534283	SMAD3	P84022	425 aa	Known RBP	28.55	■■■□□ 2.16
RELA-223	ENST00000534283	IQSEC1	Q6DN90	963 aa		28.55	■■■□□ 2.16
RELA-223	ENST00000534283	SLC43A3	Q8NBI5	491 aa		28.55	■■■□□ 2.16
RELA-223	ENST00000534283	RNF41	Q9H4P4	317 aa	Predicted RBP	28.55	■■■□□ 2.16
RELA-223	ENST00000534283		A0A0U1RQG5	324 aa	Predicted RBP	28.54	■■■□□ 2.16
RELA-223	ENST00000534283	FPGS	Q05932	587 aa		28.54	■■■□□ 2.16
RELA-223	ENST00000534283	CWC27	Q6UX04	472 aa	Known RBP	28.54	■■■□□ 2.16
RELA-223	ENST00000534283	FBXO16	Q8IX29	292 aa	Predicted RBP	28.54	■■■□□ 2.16
RELA-223	ENST00000534283	FAM126B	Q8IXS8	530 aa		28.54	■■■□□ 2.16
RELA-223	ENST00000534283	MROH7	Q68CQ1	1323 aa		28.53	■■■□□ 2.16
RELA-223	ENST00000534283	ZNF213	O14771	459 aa		28.53	■■■□□ 2.16
RELA-223	ENST00000534283	EEPD1	Q7L9B9	569 aa		28.53	■■■□□ 2.16
RELA-223	ENST00000534283	TLK2	Q86UE8	772 aa		28.53	■■■□□ 2.16
RELA-223	ENST00000534283	DGKH	Q86XP1	1220 aa		28.53	■■■□□ 2.16
RELA-223	ENST00000534283	ESR2	Q92731	530 aa		28.53	■■■□□ 2.16
RELA-223	ENST00000534283	VTI1A	Q96AJ9	217 aa		28.53	■■■□□ 2.16
RELA-223	ENST00000534283		Q9Y3F1	56 aa		28.53	■■■□□ 2.16
RELA-223	ENST00000534283	DYNC1LI2	O43237	492 aa	Predicted RBP	28.52	■■■□□ 2.16
RELA-223	ENST00000534283	FSCN1	Q16658	493 aa	Known RBP	28.52	■■■□□ 2.16
RELA-223	ENST00000534283	CXCL17	Q6UXB2	119 aa		28.52	■■■□□ 2.16
RELA-223	ENST00000534283	NOL8	Q76FK4	1167 aa	Known RBP	28.52	■■■□□ 2.16
RELA-223	ENST00000534283	ANKS1A	Q92625	1134 aa		28.52	■■■□□ 2.16
RELA-223	ENST00000534283	FAM161B	Q96MY7	647 aa		28.52	■■■□□ 2.16
RELA-223	ENST00000534283	SEMA6B	Q9H3T3	888 aa		28.52	■■■□□ 2.16
RELA-223	ENST00000534283	VTA1	Q9NP79	307 aa		28.52	■■■□□ 2.16
RELA-223	ENST00000534283	GRIN2D	O15399	1336 aa		28.51	■■■□□ 2.15
RELA-223	ENST00000534283	CD4	P01730	458 aa		28.51	■■■□□ 2.15
RELA-223	ENST00000534283	NT5C2	P49902	561 aa		28.51	■■■□□ 2.15
RELA-223	ENST00000534283	ZNF697	Q5TEC3	545 aa		28.51	■■■□□ 2.15
RELA-223	ENST00000534283	MFSD5	Q6N075	450 aa		28.51	■■■□□ 2.15
RELA-223	ENST00000534283	ZKSCAN3	Q9BRR0	538 aa		28.51	■■■□□ 2.15
RELA-223	ENST00000534283	LOC102724159	A0A0B4J2E5	919 aa		28.5	■■■□□ 2.15
RELA-223	ENST00000534283	ALDH5A1	P51649	535 aa	Predicted RBP	28.5	■■■□□ 2.15
RELA-223	ENST00000534283	PWP2	Q15269	919 aa	Known RBP	28.5	■■■□□ 2.15
RELA-223	ENST00000534283	C16orf59	Q7L2K0	433 aa		28.5	■■■□□ 2.15
RELA-223	ENST00000534283	RNPC3	Q96LT9	517 aa	Known RBP	28.5	■■■□□ 2.15
RELA-223	ENST00000534283	AP5M1	Q9H0R1	490 aa		28.5	■■■□□ 2.15
RELA-223	ENST00000534283	TTYH1	Q9H313	450 aa	Predicted RBP	28.5	■■■□□ 2.15
RELA-223	ENST00000534283	DIAPH3	Q9NSV4	1193 aa		28.5	■■■□□ 2.15
RELA-223	ENST00000534283	ADD3	Q9UEY8	706 aa	Known RBP	28.5	■■■□□ 2.15
RELA-223	ENST00000534283	PNMA2	Q9UL42	364 aa		28.5	■■■□□ 2.15
RELA-223	ENST00000534283	WDR19	Q8NEZ3	1342 aa		28.49	■■■□□ 2.15
RELA-223	ENST00000534283	CABYR	O75952	493 aa		28.49	■■■□□ 2.15
RELA-223	ENST00000534283	SLC30A10	Q6XR72	485 aa		28.49	■■■□□ 2.15
RELA-223	ENST00000534283	DSCC1	Q9BVC3	393 aa		28.49	■■■□□ 2.15
RELA-223	ENST00000534283	RBM47	A0AV96	593 aa	Known RBP	28.48	■■■□□ 2.15
RELA-223	ENST00000534283	HIP1	O00291	1037 aa		28.48	■■■□□ 2.15
RELA-223	ENST00000534283	KIAA1211	Q6ZU35	1233 aa		28.48	■■■□□ 2.15
RELA-223	ENST00000534283	CDX2	Q99626	313 aa	Predicted RBP	28.48	■■■□□ 2.15
RELA-223	ENST00000534283		A0A0C4DFX4	3053 aa		28.47	■■■□□ 2.15
RELA-223	ENST00000534283	KDM4A	O75164	1064 aa		28.47	■■■□□ 2.15
RELA-223	ENST00000534283	GOLGA8H	P0CJ92	632 aa		28.47	■■■□□ 2.15

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