RNA–Protein interactions for RNA: ENST00000532881.5

SSH3-210, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 1 (best)

Gene SSH3, Length 2,587 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-210ENST00000532881 WDR66Q8TBY9 1149 aa16.71■□□□□ 0.27
SSH3-210ENST00000532881 GRAPLQ8TC17 118 aaPredicted RBP16.71■□□□□ 0.27
SSH3-210ENST00000532881 ZNF507Q8TCN5 953 aa16.71■□□□□ 0.27
SSH3-210ENST00000532881 PCMTD1Q96MG8 357 aaPredicted RBP16.71■□□□□ 0.27
SSH3-210ENST00000532881 TRERF1Q96PN7 1200 aa16.71■□□□□ 0.27
SSH3-210ENST00000532881 MMTAG2Q9BU76 263 aaKnown RBP16.71■□□□□ 0.27
SSH3-210ENST00000532881 VSNL1P62760 191 aa16.71■□□□□ 0.26
SSH3-210ENST00000532881 GIMAP8Q8ND71 665 aaPredicted RBP16.71■□□□□ 0.26
SSH3-210ENST00000532881 ANKRD20A12PQ8NF67 263 aa16.71■□□□□ 0.26
SSH3-210ENST00000532881 NUDT12Q9BQG2 462 aa16.71■□□□□ 0.26
SSH3-210ENST00000532881 TUBGCP2Q9BSJ2 902 aa16.71■□□□□ 0.26
SSH3-210ENST00000532881 LACRTQ9GZZ8 138 aa16.71■□□□□ 0.26
SSH3-210ENST00000532881 CD209Q9NNX6 404 aa16.71■□□□□ 0.26
SSH3-210ENST00000532881 ABCB6Q9NP58 842 aa16.71■□□□□ 0.26
SSH3-210ENST00000532881 LUC7L2Q9Y383 392 aaKnown RBP16.71■□□□□ 0.26
SSH3-210ENST00000532881 AHDC1Q5TGY3 1603 aaPredicted RBP16.71■□□□□ 0.26
SSH3-210ENST00000532881 RIMBP2O15034 1052 aa16.7■□□□□ 0.26
SSH3-210ENST00000532881 ZMYND10O75800 440 aa16.7■□□□□ 0.26
SSH3-210ENST00000532881 CNBD1Q8NA66 436 aa16.7■□□□□ 0.26
SSH3-210ENST00000532881 SMCR8Q8TEV9 937 aaPredicted RBP16.7■□□□□ 0.26
SSH3-210ENST00000532881 GDAP1L1Q96MZ0 367 aa16.7■□□□□ 0.26
SSH3-210ENST00000532881 TRIM9Q9C026 710 aa16.7■□□□□ 0.26
SSH3-210ENST00000532881 SH3GLB2Q9NR46 395 aa16.7■□□□□ 0.26
SSH3-210ENST00000532881 TTF2Q9UNY4 1162 aaKnown RBP16.7■□□□□ 0.26
SSH3-210ENST00000532881 POTEMA6NI47 508 aa16.7■□□□□ 0.26
SSH3-210ENST00000532881 LGALS16A8MUM7 142 aa16.7■□□□□ 0.26
SSH3-210ENST00000532881 TDP2O95551 362 aa16.7■□□□□ 0.26
SSH3-210ENST00000532881 ATP1A1P05023 1023 aaKnown RBP16.7■□□□□ 0.26
SSH3-210ENST00000532881 MFSD14BQ5SR56 506 aa16.7■□□□□ 0.26
SSH3-210ENST00000532881 KRT26Q7Z3Y9 468 aa16.7■□□□□ 0.26
SSH3-210ENST00000532881 NAPGQ99747 312 aaPredicted RBP16.7■□□□□ 0.26
SSH3-210ENST00000532881 GPCPD1Q9NPB8 672 aa16.7■□□□□ 0.26
SSH3-210ENST00000532881 LRRC4BQ9NT99 713 aa16.7■□□□□ 0.26
SSH3-210ENST00000532881 UTRNP46939 3433 aa16.7■□□□□ 0.26
SSH3-210ENST00000532881 SNED1Q8TER0 1413 aa16.69■□□□□ 0.26
SSH3-210ENST00000532881 SLC37A4O43826 429 aa16.69■□□□□ 0.26
SSH3-210ENST00000532881 RHOBTB3O94955 611 aa16.69■□□□□ 0.26
SSH3-210ENST00000532881 OR52Z1P0C646 297 aa16.69■□□□□ 0.26
SSH3-210ENST00000532881 TRIM21P19474 475 aaKnown RBP16.69■□□□□ 0.26
SSH3-210ENST00000532881 FECHP22830 423 aa16.69■□□□□ 0.26
SSH3-210ENST00000532881 OR8K1Q8NGG5 319 aa16.69■□□□□ 0.26
SSH3-210ENST00000532881 ZMYND12Q9H0C1 365 aa16.69■□□□□ 0.26
SSH3-210ENST00000532881 PDS5AQ29RF7 1337 aaKnown RBP16.69■□□□□ 0.26
SSH3-210ENST00000532881 PSMA7O14818 248 aa16.69■□□□□ 0.26
SSH3-210ENST00000532881 EPHB6O15197 1021 aa16.69■□□□□ 0.26
SSH3-210ENST00000532881 ZBTB22O15209 634 aa16.69■□□□□ 0.26
SSH3-210ENST00000532881 ZNF185O15231 689 aa16.69■□□□□ 0.26
SSH3-210ENST00000532881 EDIL3O43854 480 aa16.69■□□□□ 0.26
SSH3-210ENST00000532881 MRPS25P82663 173 aaKnown RBP16.69■□□□□ 0.26
SSH3-210ENST00000532881 SPAG1Q07617 926 aa16.69■□□□□ 0.26
SSH3-210ENST00000532881 TBC1D8BQ0IIM8 1120 aa16.69■□□□□ 0.26
SSH3-210ENST00000532881 LRRC41Q15345 812 aa16.69■□□□□ 0.26
SSH3-210ENST00000532881 TRAPPC3LQ5T215 181 aa16.69■□□□□ 0.26
SSH3-210ENST00000532881 PRR5LQ6MZQ0 368 aa16.69■□□□□ 0.26
SSH3-210ENST00000532881 AMOTL1Q8IY63 956 aa16.69■□□□□ 0.26
SSH3-210ENST00000532881 CCDC155Q8N6L0 562 aa16.69■□□□□ 0.26
SSH3-210ENST00000532881 KIAA0895Q8NCT3 520 aa16.69■□□□□ 0.26
SSH3-210ENST00000532881 ANKS1AQ92625 1134 aa16.69■□□□□ 0.26
SSH3-210ENST00000532881 CNOT6LQ96LI5 555 aaKnown RBP16.69■□□□□ 0.26
SSH3-210ENST00000532881 TCP11L1Q9NUJ3 509 aa16.69■□□□□ 0.26
SSH3-210ENST00000532881 POLLQ9UGP5 575 aa16.69■□□□□ 0.26
SSH3-210ENST00000532881 NONOQ15233 471 aaKnown RBP eCLIP16.68■□□□□ 0.26
SSH3-210ENST00000532881 UBE2SQ16763 222 aa16.68■□□□□ 0.26
SSH3-210ENST00000532881 CCDC122Q5T0U0 273 aa16.68■□□□□ 0.26
SSH3-210ENST00000532881 ZNF804AQ7Z570 1209 aa16.68■□□□□ 0.26
SSH3-210ENST00000532881 CCDC148Q8NFR7 591 aa16.68■□□□□ 0.26
SSH3-210ENST00000532881 CCDC51Q96ER9 411 aa16.68■□□□□ 0.26
SSH3-210ENST00000532881 CCSER1Q9C0I3 900 aa16.68■□□□□ 0.26
SSH3-210ENST00000532881 PDE11AQ9HCR9 933 aa16.68■□□□□ 0.26
SSH3-210ENST00000532881 MACROD2A1Z1Q3 448 aa16.68■□□□□ 0.26
SSH3-210ENST00000532881 PHACTR2O75167 634 aa16.68■□□□□ 0.26
SSH3-210ENST00000532881 SEMA6BQ9H3T3 888 aa16.68■□□□□ 0.26
SSH3-210ENST00000532881 MYO6Q9UM54 1294 aa16.68■□□□□ 0.26
SSH3-210ENST00000532881 SBF2Q86WG5 1849 aa16.67■□□□□ 0.26
SSH3-210ENST00000532881 RAD21O60216 631 aa16.67■□□□□ 0.26
SSH3-210ENST00000532881 SLC16A2P36021 539 aa16.67■□□□□ 0.26
SSH3-210ENST00000532881 MTIF2P46199 727 aaKnown RBP16.67■□□□□ 0.26
SSH3-210ENST00000532881 GNAQP50148 359 aa16.67■□□□□ 0.26
SSH3-210ENST00000532881 RHBDL3P58872 404 aa16.67■□□□□ 0.26
SSH3-210ENST00000532881 BEND6Q5SZJ8 279 aaPredicted RBP16.67■□□□□ 0.26
SSH3-210ENST00000532881 KCNK18Q7Z418 384 aa16.67■□□□□ 0.26
SSH3-210ENST00000532881 MMS19Q96T76 1030 aa16.67■□□□□ 0.26
SSH3-210ENST00000532881 UBXN6Q9BZV1 441 aa16.67■□□□□ 0.26
SSH3-210ENST00000532881 KANSL2Q9H9L4 492 aa16.67■□□□□ 0.26
SSH3-210ENST00000532881 EXOC1Q9NV70 894 aa16.67■□□□□ 0.26
SSH3-210ENST00000532881 MAGEC2Q9UBF1 373 aaPredicted RBP16.67■□□□□ 0.26
SSH3-210ENST00000532881 AMPD2Q01433 879 aa16.67■□□□□ 0.26
SSH3-210ENST00000532881 SHROOM1Q2M3G4 852 aaPredicted RBP16.67■□□□□ 0.26
SSH3-210ENST00000532881 MIIPQ5JXC2 388 aa16.67■□□□□ 0.26
SSH3-210ENST00000532881 RC3H1Q5TC82 1133 aaKnown RBP16.67■□□□□ 0.26
SSH3-210ENST00000532881 TTBK2Q6IQ55 1244 aa16.67■□□□□ 0.26
SSH3-210ENST00000532881 C16orf86Q6ZW13 317 aa16.67■□□□□ 0.26
SSH3-210ENST00000532881 NEK8Q86SG6 692 aa16.67■□□□□ 0.26
SSH3-210ENST00000532881 RPGRQ92834 1020 aaKnown RBP16.67■□□□□ 0.26
SSH3-210ENST00000532881 P2RX5Q93086 422 aa16.67■□□□□ 0.26
SSH3-210ENST00000532881 RRP36Q96EU6 259 aaKnown RBP16.67■□□□□ 0.26
SSH3-210ENST00000532881 DRC1Q96MC2 740 aa16.67■□□□□ 0.26
SSH3-210ENST00000532881 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.67■□□□□ 0.26
SSH3-210ENST00000532881 C6orf229H3BNL8 230 aa16.66■□□□□ 0.26
SSH3-210ENST00000532881 CYP2C19P33261 490 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms