RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 IGFBP6P24592 240 aaPredicted RBP6.68□□□□□ -1.34
USP47-211ENST00000531513 ZNF76P36508 570 aa6.68□□□□□ -1.34
USP47-211ENST00000531513 LIMS1P48059 325 aa6.68□□□□□ -1.34
USP47-211ENST00000531513 ZNF165P49910 485 aa6.68□□□□□ -1.34
USP47-211ENST00000531513 ZNF200P98182 395 aaPredicted RBP6.68□□□□□ -1.34
USP47-211ENST00000531513 MVKQ03426 396 aa6.68□□□□□ -1.34
USP47-211ENST00000531513 LRRFIP1Q32MZ4 808 aaKnown RBP6.68□□□□□ -1.34
USP47-211ENST00000531513 EAF1Q96JC9 268 aaPredicted RBP6.68□□□□□ -1.34
USP47-211ENST00000531513 C9IYK1 514 aa6.67□□□□□ -1.34
USP47-211ENST00000531513 GSTM1P09488 218 aa6.67□□□□□ -1.34
USP47-211ENST00000531513 MAPKAPK2P49137 400 aa6.67□□□□□ -1.34
USP47-211ENST00000531513 ZC3H14Q6PJT7 736 aaKnown RBP6.67□□□□□ -1.34
USP47-211ENST00000531513 FRMD5Q7Z6J6 570 aa6.67□□□□□ -1.34
USP47-211ENST00000531513 C7orf61Q8IZ16 206 aa6.67□□□□□ -1.34
USP47-211ENST00000531513 NAT16Q8N8M0 369 aa6.67□□□□□ -1.34
USP47-211ENST00000531513 SLC43A3Q8NBI5 491 aa6.67□□□□□ -1.34
USP47-211ENST00000531513 SLC12A9Q9BXP2 914 aa6.67□□□□□ -1.34
USP47-211ENST00000531513 SUCOQ9UBS9 1254 aaKnown RBP6.67□□□□□ -1.34
USP47-211ENST00000531513 IRS2Q9Y4H2 1338 aa6.67□□□□□ -1.34
USP47-211ENST00000531513 ACRP10323 421 aa6.66□□□□□ -1.34
USP47-211ENST00000531513 NR1I3Q14994 352 aa6.66□□□□□ -1.34
USP47-211ENST00000531513 GGNQ86UU5 652 aa6.66□□□□□ -1.34
USP47-211ENST00000531513 SLITRK4Q8IW52 837 aa6.66□□□□□ -1.34
USP47-211ENST00000531513 TINF2Q9BSI4 451 aa6.66□□□□□ -1.34
USP47-211ENST00000531513 NT5C1AQ9BXI3 368 aa6.66□□□□□ -1.34
USP47-211ENST00000531513 CCSER2Q9H7U1 834 aa6.66□□□□□ -1.34
USP47-211ENST00000531513 PLA2G2DQ9UNK4 145 aa6.66□□□□□ -1.34
USP47-211ENST00000531513 H0Y8X5 98 aa6.65□□□□□ -1.34
USP47-211ENST00000531513 ADRB1P08588 477 aa6.65□□□□□ -1.34
USP47-211ENST00000531513 PFKLP17858 780 aa6.65□□□□□ -1.34
USP47-211ENST00000531513 CANXP27824 592 aaKnown RBP6.65□□□□□ -1.34
USP47-211ENST00000531513 TDRD10Q5VZ19 366 aaKnown RBP6.65□□□□□ -1.34
USP47-211ENST00000531513 CCDC144CPQ8IYA2 1237 aa6.65□□□□□ -1.34
USP47-211ENST00000531513 NKD1Q969G9 470 aa6.65□□□□□ -1.34
USP47-211ENST00000531513 TANGO6Q9C0B7 1094 aa6.65□□□□□ -1.34
USP47-211ENST00000531513 HCFC2Q9Y5Z7 792 aa6.65□□□□□ -1.34
USP47-211ENST00000531513 A0A1W2PQ27 194 aa6.64□□□□□ -1.35
USP47-211ENST00000531513 A0A1W2PQ64 194 aa6.64□□□□□ -1.35
USP47-211ENST00000531513 A0A1W2PQC6 194 aa6.64□□□□□ -1.35
USP47-211ENST00000531513 A0A1W2PQD8 194 aa6.64□□□□□ -1.35
USP47-211ENST00000531513 SRGAP3O43295 1099 aa6.64□□□□□ -1.35
USP47-211ENST00000531513 DBHP09172 617 aa6.64□□□□□ -1.35
USP47-211ENST00000531513 FBLN1P23142 703 aa6.64□□□□□ -1.35
USP47-211ENST00000531513 SLURP1P55000 103 aa6.64□□□□□ -1.35
USP47-211ENST00000531513 CAP1Q01518 475 aa6.64□□□□□ -1.35
USP47-211ENST00000531513 CWF19L1Q69YN2 538 aaKnown RBP6.64□□□□□ -1.35
USP47-211ENST00000531513 PPFIBP1Q86W92 1011 aa6.64□□□□□ -1.35
USP47-211ENST00000531513 JAMLQ86YT9 394 aa6.64□□□□□ -1.35
USP47-211ENST00000531513 BDH2Q9BUT1 245 aa6.64□□□□□ -1.35
USP47-211ENST00000531513 CAPN10Q9HC96 672 aa6.64□□□□□ -1.35
USP47-211ENST00000531513 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.64□□□□□ -1.35
USP47-211ENST00000531513 FGF10O15520 208 aaPredicted RBP6.63□□□□□ -1.35
USP47-211ENST00000531513 PRICKLE3O43900 615 aaPredicted RBP6.63□□□□□ -1.35
USP47-211ENST00000531513 PLA2G1BP04054 148 aaKnown RBP6.63□□□□□ -1.35
USP47-211ENST00000531513 CYBBP04839 570 aa6.63□□□□□ -1.35
USP47-211ENST00000531513 KCNC1P48547 511 aa6.63□□□□□ -1.35
USP47-211ENST00000531513 PMS1P54277 932 aaKnown RBP6.63□□□□□ -1.35
USP47-211ENST00000531513 EFEMP1Q12805 493 aa6.63□□□□□ -1.35
USP47-211ENST00000531513 RTP5Q14D33 572 aa6.63□□□□□ -1.35
USP47-211ENST00000531513 VWA3BQ502W6 1294 aa6.63□□□□□ -1.35
USP47-211ENST00000531513 HLA-DQA1Q5Y7H0 255 aa6.63□□□□□ -1.35
USP47-211ENST00000531513 DCAF15Q66K64 600 aa6.63□□□□□ -1.35
USP47-211ENST00000531513 PAQR3Q6TCH7 311 aa6.63□□□□□ -1.35
USP47-211ENST00000531513 KIAA0825Q8IV33 1275 aa6.63□□□□□ -1.35
USP47-211ENST00000531513 DHRS1Q96LJ7 313 aa6.63□□□□□ -1.35
USP47-211ENST00000531513 SPATA32Q96LK8 384 aa6.63□□□□□ -1.35
USP47-211ENST00000531513 SPON2Q9BUD6 331 aa6.63□□□□□ -1.35
USP47-211ENST00000531513 ACBD3Q9H3P7 528 aa6.63□□□□□ -1.35
USP47-211ENST00000531513 ZNRF3Q9ULT6 936 aa6.63□□□□□ -1.35
USP47-211ENST00000531513 CADPSQ9ULU8 1353 aa6.62□□□□□ -1.35
USP47-211ENST00000531513 SMARCA5O60264 1052 aaPredicted RBP6.62□□□□□ -1.35
USP47-211ENST00000531513 GNL2Q13823 731 aaKnown RBP6.62□□□□□ -1.35
USP47-211ENST00000531513 TARBP2Q15633 366 aaKnown RBP6.62□□□□□ -1.35
USP47-211ENST00000531513 BICRALQ6AI39 1079 aa6.62□□□□□ -1.35
USP47-211ENST00000531513 CYP2R1Q6VVX0 501 aa6.62□□□□□ -1.35
USP47-211ENST00000531513 LSRQ86X29 649 aaPredicted RBP6.62□□□□□ -1.35
USP47-211ENST00000531513 ADGRG2Q8IZP9 1017 aa6.62□□□□□ -1.35
USP47-211ENST00000531513 NLGN1Q8N2Q7 840 aa6.62□□□□□ -1.35
USP47-211ENST00000531513 SRRTQ9BXP5 876 aaKnown RBP6.62□□□□□ -1.35
USP47-211ENST00000531513 SUSD2Q9UGT4 822 aa6.62□□□□□ -1.35
USP47-211ENST00000531513 A0A1B0GTL3 188 aa6.61□□□□□ -1.35
USP47-211ENST00000531513 ATF2P15336 505 aa6.61□□□□□ -1.35
USP47-211ENST00000531513 ATP2B1P20020 1258 aa6.61□□□□□ -1.35
USP47-211ENST00000531513 TACR1P25103 407 aa6.61□□□□□ -1.35
USP47-211ENST00000531513 ZNF445P59923 1031 aa6.61□□□□□ -1.35
USP47-211ENST00000531513 PLP2Q04941 152 aa6.61□□□□□ -1.35
USP47-211ENST00000531513 SPATS1Q496A3 300 aa6.61□□□□□ -1.35
USP47-211ENST00000531513 AXDND1Q5T1B0 1012 aaPredicted RBP6.61□□□□□ -1.35
USP47-211ENST00000531513 INTS3Q68E01 1043 aaKnown RBP6.61□□□□□ -1.35
USP47-211ENST00000531513 DPH6Q7L8W6 267 aa6.61□□□□□ -1.35
USP47-211ENST00000531513 BRF1Q92994 677 aa6.61□□□□□ -1.35
USP47-211ENST00000531513 BORCS6Q96GS4 357 aa6.61□□□□□ -1.35
USP47-211ENST00000531513 GMLQ99445 158 aa6.61□□□□□ -1.35
USP47-211ENST00000531513 GP6Q9HCN6 339 aa6.61□□□□□ -1.35
USP47-211ENST00000531513 PDLIM7Q9NR12 457 aa6.61□□□□□ -1.35
USP47-211ENST00000531513 DDX41Q9UJV9 622 aaKnown RBP6.61□□□□□ -1.35
USP47-211ENST00000531513 A0A1W2PQJ5 194 aa6.6□□□□□ -1.35
USP47-211ENST00000531513 FOXO4P98177 505 aa6.6□□□□□ -1.35
USP47-211ENST00000531513 ZNF394Q53GI3 561 aa6.6□□□□□ -1.35
USP47-211ENST00000531513 LIPIQ6XZB0 460 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms