RNA–Protein interactions for RNA: ENST00000528246.5

MSRA-210, Transcript of methionine sulfoxide reductase A, humanhuman

TSL 1 (best) BASIC

Gene MSRA, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRA-210ENST00000528246 C7orf25Q9BPX7 421 aa11.5□□□□□ -0.57
MSRA-210ENST00000528246 EDEM3Q9BZQ6 932 aa11.5□□□□□ -0.57
MSRA-210ENST00000528246 ANKRD2Q9GZV1 360 aa11.5□□□□□ -0.57
MSRA-210ENST00000528246 EXOC1Q9NV70 894 aa11.5□□□□□ -0.57
MSRA-210ENST00000528246 ABCF2Q9UG63 623 aa11.5□□□□□ -0.57
MSRA-210ENST00000528246 COL5A3P25940 1745 aaPredicted RBP11.5□□□□□ -0.57
MSRA-210ENST00000528246 BAZ2AQ9UIF9 1905 aaKnown RBP11.49□□□□□ -0.57
MSRA-210ENST00000528246 USP17L12C9JPN9 530 aa11.49□□□□□ -0.57
MSRA-210ENST00000528246 USP17L21D6R901 530 aa11.49□□□□□ -0.57
MSRA-210ENST00000528246 LCA5LO95447 670 aa11.49□□□□□ -0.57
MSRA-210ENST00000528246 MCM7P33993 719 aa11.49□□□□□ -0.57
MSRA-210ENST00000528246 PTGER2P43116 358 aa11.49□□□□□ -0.57
MSRA-210ENST00000528246 LMAN1P49257 510 aa11.49□□□□□ -0.57
MSRA-210ENST00000528246 MCM6Q14566 821 aa11.49□□□□□ -0.57
MSRA-210ENST00000528246 SPTY2D1Q68D10 685 aaPredicted RBP11.49□□□□□ -0.57
MSRA-210ENST00000528246 CNNM4Q6P4Q7 775 aa11.49□□□□□ -0.57
MSRA-210ENST00000528246 WDR59Q6PJI9 974 aa11.49□□□□□ -0.57
MSRA-210ENST00000528246 FAM84BQ96KN1 310 aaPredicted RBP11.49□□□□□ -0.57
MSRA-210ENST00000528246 SLF1Q9BQI6 1058 aa11.49□□□□□ -0.57
MSRA-210ENST00000528246 BLZF1Q9H2G9 400 aa11.49□□□□□ -0.57
MSRA-210ENST00000528246 TMEM51Q9NW97 253 aa11.49□□□□□ -0.57
MSRA-210ENST00000528246 STK32BQ9NY57 414 aa11.49□□□□□ -0.57
MSRA-210ENST00000528246 NIP7Q9Y221 180 aaKnown RBP eCLIP11.49□□□□□ -0.57
MSRA-210ENST00000528246 CCDC88AQ3V6T2 1871 aa11.49□□□□□ -0.57
MSRA-210ENST00000528246 BTAF1O14981 1849 aa11.49□□□□□ -0.57
MSRA-210ENST00000528246 CCDC194A0A1B0GVG4 234 aa11.49□□□□□ -0.57
MSRA-210ENST00000528246 hCG_1984214I3L0E3 225 aa11.49□□□□□ -0.57
MSRA-210ENST00000528246 RNF225M0QZC1 329 aaPredicted RBP11.49□□□□□ -0.57
MSRA-210ENST00000528246 ZBTB7AO95365 584 aa11.49□□□□□ -0.57
MSRA-210ENST00000528246 FGFR1OPO95684 399 aaKnown RBP11.49□□□□□ -0.57
MSRA-210ENST00000528246 CASP1P29466 404 aa11.49□□□□□ -0.57
MSRA-210ENST00000528246 UBA7P41226 1012 aa11.49□□□□□ -0.57
MSRA-210ENST00000528246 NOM1Q5C9Z4 860 aaKnown RBP11.49□□□□□ -0.57
MSRA-210ENST00000528246 CCDC122Q5T0U0 273 aa11.49□□□□□ -0.57
MSRA-210ENST00000528246 RCSD1Q6JBY9 416 aa11.49□□□□□ -0.57
MSRA-210ENST00000528246 SRLQ86TD4 932 aa11.49□□□□□ -0.57
MSRA-210ENST00000528246 AMOTL1Q8IY63 956 aa11.49□□□□□ -0.57
MSRA-210ENST00000528246 GOLGA6L1Q8N7Z2 621 aa11.49□□□□□ -0.57
MSRA-210ENST00000528246 ZNF713Q8N859 430 aaPredicted RBP11.49□□□□□ -0.57
MSRA-210ENST00000528246 TRIM58Q8NG06 486 aa11.49□□□□□ -0.57
MSRA-210ENST00000528246 ZNF384Q8TF68 577 aa11.49□□□□□ -0.57
MSRA-210ENST00000528246 COG1Q8WTW3 980 aa11.49□□□□□ -0.57
MSRA-210ENST00000528246 SMARCC1Q92922 1105 aaPredicted RBP11.49□□□□□ -0.57
MSRA-210ENST00000528246 FAM107BQ9H098 131 aa11.49□□□□□ -0.57
MSRA-210ENST00000528246 VPS18Q9P253 973 aa11.49□□□□□ -0.57
MSRA-210ENST00000528246 FEZ2Q9UHY8 353 aaPredicted RBP11.49□□□□□ -0.57
MSRA-210ENST00000528246 SNAP23O00161 211 aa11.48□□□□□ -0.57
MSRA-210ENST00000528246 CAPN2P17655 700 aa11.48□□□□□ -0.57
MSRA-210ENST00000528246 TNFRSF8P28908 595 aa11.48□□□□□ -0.57
MSRA-210ENST00000528246 VAV2P52735 878 aa11.48□□□□□ -0.57
MSRA-210ENST00000528246 HERVK_113P62684 666 aa11.48□□□□□ -0.57
MSRA-210ENST00000528246 SLC15A2Q16348 729 aa11.48□□□□□ -0.57
MSRA-210ENST00000528246 KRT25Q7Z3Z0 450 aa11.48□□□□□ -0.57
MSRA-210ENST00000528246 MMGT1Q8N4V1 131 aa11.48□□□□□ -0.57
MSRA-210ENST00000528246 NOA1Q8NC60 698 aaKnown RBP11.48□□□□□ -0.57
MSRA-210ENST00000528246 P2RX5Q93086 422 aa11.48□□□□□ -0.57
MSRA-210ENST00000528246 TRIM47Q96LD4 638 aa11.48□□□□□ -0.57
MSRA-210ENST00000528246 CHP1Q99653 195 aa11.48□□□□□ -0.57
MSRA-210ENST00000528246 TUBGCP2Q9BSJ2 902 aa11.48□□□□□ -0.57
MSRA-210ENST00000528246 KAT14Q9H8E8 782 aa11.48□□□□□ -0.57
MSRA-210ENST00000528246 BARHL2Q9NY43 387 aa11.48□□□□□ -0.57
MSRA-210ENST00000528246 RNF14Q9UBS8 474 aa11.48□□□□□ -0.57
MSRA-210ENST00000528246 MINPP1Q9UNW1 487 aa11.48□□□□□ -0.57
MSRA-210ENST00000528246 GDAQ9Y2T3 454 aa11.48□□□□□ -0.57
MSRA-210ENST00000528246 JRKLQ9Y4A0 524 aa11.48□□□□□ -0.57
MSRA-210ENST00000528246 LOC102724428A0A0B4J2F2 783 aa11.47□□□□□ -0.57
MSRA-210ENST00000528246 A0A0U1RQJ8 604 aa11.47□□□□□ -0.57
MSRA-210ENST00000528246 ESYT2A0FGR8 921 aa11.47□□□□□ -0.57
MSRA-210ENST00000528246 TSPY2A6NKD2 308 aa11.47□□□□□ -0.57
MSRA-210ENST00000528246 USO1O60763 962 aaKnown RBP11.47□□□□□ -0.57
MSRA-210ENST00000528246 SHOX2O60902 331 aaPredicted RBP11.47□□□□□ -0.57
MSRA-210ENST00000528246 PRPF6O94906 941 aaKnown RBP11.47□□□□□ -0.57
MSRA-210ENST00000528246 RHOXF2BP0C7M4 288 aa11.47□□□□□ -0.57
MSRA-210ENST00000528246 SIK1P57059 783 aa11.47□□□□□ -0.57
MSRA-210ENST00000528246 DYNLL1P63167 89 aaKnown RBP11.47□□□□□ -0.57
MSRA-210ENST00000528246 MECOMQ03112 1051 aa11.47□□□□□ -0.57
MSRA-210ENST00000528246 CCDC84Q86UT8 332 aaPredicted RBP11.47□□□□□ -0.57
MSRA-210ENST00000528246 ATRIPQ8WXE1 791 aa11.47□□□□□ -0.57
MSRA-210ENST00000528246 JAKMIP2Q96AA8 810 aa11.47□□□□□ -0.57
MSRA-210ENST00000528246 RHOXF2Q9BQY4 288 aa11.47□□□□□ -0.57
MSRA-210ENST00000528246 SPZ1Q9BXG8 430 aa11.47□□□□□ -0.57
MSRA-210ENST00000528246 ZMYND12Q9H0C1 365 aa11.47□□□□□ -0.57
MSRA-210ENST00000528246 RASSF4Q9H2L5 321 aa11.47□□□□□ -0.57
MSRA-210ENST00000528246 ZSWIM4Q9H7M6 989 aa11.47□□□□□ -0.57
MSRA-210ENST00000528246 ZNF287Q9HBT7 754 aa11.47□□□□□ -0.57
MSRA-210ENST00000528246 GUCA1BQ9UMX6 200 aa11.47□□□□□ -0.57
MSRA-210ENST00000528246 PLAGL2Q9UPG8 496 aa11.47□□□□□ -0.57
MSRA-210ENST00000528246 COL24A1Q17RW2 1714 aa11.47□□□□□ -0.57
MSRA-210ENST00000528246 FLT1P17948 1338 aa11.47□□□□□ -0.57
MSRA-210ENST00000528246 PVALEFA0A1B0GWK0 134 aa11.46□□□□□ -0.57
MSRA-210ENST00000528246 TRIM21P19474 475 aaKnown RBP11.46□□□□□ -0.57
MSRA-210ENST00000528246 ATP6V1AP38606 617 aa11.46□□□□□ -0.57
MSRA-210ENST00000528246 GYG1P46976 350 aa11.46□□□□□ -0.57
MSRA-210ENST00000528246 KIF5AQ12840 1032 aa11.46□□□□□ -0.57
MSRA-210ENST00000528246 FKBP15Q5T1M5 1219 aa11.46□□□□□ -0.57
MSRA-210ENST00000528246 C12orf60Q5U649 245 aa11.46□□□□□ -0.57
MSRA-210ENST00000528246 GBP6Q6ZN66 633 aa11.46□□□□□ -0.57
MSRA-210ENST00000528246 KIAA1328Q86T90 577 aa11.46□□□□□ -0.57
MSRA-210ENST00000528246 CSGALNACT2Q8N6G5 542 aa11.46□□□□□ -0.57
MSRA-210ENST00000528246 DUSP9Q99956 384 aaKnown RBP11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms