RNA–Protein interactions for RNA: ENST00000524126.5

SPIDR-224, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 1 (best)

Gene SPIDR, Length 2,614 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-224ENST00000524126 CTCFP49711 727 aaPredicted RBP11.3□□□□□ -0.6
SPIDR-224ENST00000524126 BLMHQ13867 455 aa11.3□□□□□ -0.6
SPIDR-224ENST00000524126 C8orf74Q6P047 294 aa11.3□□□□□ -0.6
SPIDR-224ENST00000524126 TRIML1Q8N9V2 468 aa11.3□□□□□ -0.6
SPIDR-224ENST00000524126 NOC3LQ8WTT2 800 aaKnown RBP11.3□□□□□ -0.6
SPIDR-224ENST00000524126 STAMQ92783 540 aa11.3□□□□□ -0.6
SPIDR-224ENST00000524126 PAIP2Q9BPZ3 127 aaKnown RBP11.3□□□□□ -0.6
SPIDR-224ENST00000524126 ARHGEF10LQ9HCE6 1279 aa11.3□□□□□ -0.6
SPIDR-224ENST00000524126 A8MUI8 341 aa11.29□□□□□ -0.6
SPIDR-224ENST00000524126 PPP1R3GB7ZBB8 358 aa11.29□□□□□ -0.6
SPIDR-224ENST00000524126 UBXN1Q04323 297 aa11.29□□□□□ -0.6
SPIDR-224ENST00000524126 GLE1Q53GS7 698 aaKnown RBP11.29□□□□□ -0.6
SPIDR-224ENST00000524126 GPIHBP1Q8IV16 184 aa11.29□□□□□ -0.6
SPIDR-224ENST00000524126 RAPGEF5Q92565 580 aa11.29□□□□□ -0.6
SPIDR-224ENST00000524126 TSC22D3Q99576 134 aa11.29□□□□□ -0.6
SPIDR-224ENST00000524126 OSBPL1AQ9BXW6 950 aa11.29□□□□□ -0.6
SPIDR-224ENST00000524126 TSGA10Q9BZW7 698 aa11.29□□□□□ -0.6
SPIDR-224ENST00000524126 NDST4Q9H3R1 872 aa11.29□□□□□ -0.6
SPIDR-224ENST00000524126 MLXIPQ9HAP2 919 aa11.29□□□□□ -0.6
SPIDR-224ENST00000524126 EPB41L5Q9HCM4 733 aa11.29□□□□□ -0.6
SPIDR-224ENST00000524126 NOP53Q9NZM5 478 aaKnown RBP11.29□□□□□ -0.6
SPIDR-224ENST00000524126 CAPN6Q9Y6Q1 641 aa11.29□□□□□ -0.6
SPIDR-224ENST00000524126 A0A087X0B3 334 aa11.29□□□□□ -0.6
SPIDR-224ENST00000524126 A6NHS1 94 aa11.29□□□□□ -0.6
SPIDR-224ENST00000524126 SPDYE5A6NIY4 337 aa11.29□□□□□ -0.6
SPIDR-224ENST00000524126 HMGB1P1B2RPK0 211 aaPredicted RBP11.29□□□□□ -0.6
SPIDR-224ENST00000524126 PES1O00541 588 aaKnown RBP11.29□□□□□ -0.6
SPIDR-224ENST00000524126 TUBP50607 506 aa11.29□□□□□ -0.6
SPIDR-224ENST00000524126 VAV2P52735 878 aa11.29□□□□□ -0.6
SPIDR-224ENST00000524126 GUCY2DQ02846 1103 aa11.29□□□□□ -0.6
SPIDR-224ENST00000524126 TFCP2Q12800 502 aa11.29□□□□□ -0.6
SPIDR-224ENST00000524126 KCNV2Q8TDN2 545 aa11.29□□□□□ -0.6
SPIDR-224ENST00000524126 ZNF496Q96IT1 587 aaPredicted RBP11.29□□□□□ -0.6
SPIDR-224ENST00000524126 OSBPL9Q96SU4 736 aa11.29□□□□□ -0.6
SPIDR-224ENST00000524126 SLC52A2Q9HAB3 445 aa11.29□□□□□ -0.6
SPIDR-224ENST00000524126 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.29□□□□□ -0.6
SPIDR-224ENST00000524126 ZFATQ9P243 1243 aa11.29□□□□□ -0.6
SPIDR-224ENST00000524126 FBXO2Q9UK22 296 aaPredicted RBP11.29□□□□□ -0.6
SPIDR-224ENST00000524126 RFX7Q2KHR2 1363 aa11.29□□□□□ -0.6
SPIDR-224ENST00000524126 ANO9A1A5B4 782 aa11.28□□□□□ -0.6
SPIDR-224ENST00000524126 SMIM24O75264 130 aa11.28□□□□□ -0.6
SPIDR-224ENST00000524126 ZPR1O75312 459 aa11.28□□□□□ -0.6
SPIDR-224ENST00000524126 ANTXR2P58335 489 aa11.28□□□□□ -0.6
SPIDR-224ENST00000524126 MAP3K12Q12852 859 aa11.28□□□□□ -0.6
SPIDR-224ENST00000524126 AIMP1Q12904 312 aaKnown RBP11.28□□□□□ -0.6
SPIDR-224ENST00000524126 C1QTNF12Q5T7M4 302 aa11.28□□□□□ -0.6
SPIDR-224ENST00000524126 ERICH1Q86X53 443 aa11.28□□□□□ -0.6
SPIDR-224ENST00000524126 MFN1Q8IWA4 741 aa11.28□□□□□ -0.6
SPIDR-224ENST00000524126 IFNL2Q8IZJ0 200 aa11.28□□□□□ -0.6
SPIDR-224ENST00000524126 MS4A14Q96JA4 679 aa11.28□□□□□ -0.6
SPIDR-224ENST00000524126 NLRP3Q96P20 1036 aa11.28□□□□□ -0.6
SPIDR-224ENST00000524126 TMBIM4Q9HC24 238 aa11.28□□□□□ -0.6
SPIDR-224ENST00000524126 SLC12A6Q9UHW9 1150 aa11.28□□□□□ -0.6
SPIDR-224ENST00000524126 SIPA1L3O60292 1781 aaPredicted RBP11.28□□□□□ -0.6
SPIDR-224ENST00000524126 DPPA5A6NC42 116 aa11.28□□□□□ -0.6
SPIDR-224ENST00000524126 MOCS3O95396 460 aa11.28□□□□□ -0.6
SPIDR-224ENST00000524126 MYL6BP14649 208 aa11.28□□□□□ -0.6
SPIDR-224ENST00000524126 TTF1Q15361 905 aaPredicted RBP11.28□□□□□ -0.6
SPIDR-224ENST00000524126 FAM133BQ5BKY9 247 aaKnown RBP11.28□□□□□ -0.6
SPIDR-224ENST00000524126 CPLX4Q7Z7G2 160 aa11.28□□□□□ -0.6
SPIDR-224ENST00000524126 SPATA20Q8TB22 786 aa11.28□□□□□ -0.6
SPIDR-224ENST00000524126 DSCC1Q9BVC3 393 aa11.28□□□□□ -0.6
SPIDR-224ENST00000524126 KDM4CQ9H3R0 1056 aa11.28□□□□□ -0.6
SPIDR-224ENST00000524126 LRWD1Q9UFC0 647 aa11.28□□□□□ -0.6
SPIDR-224ENST00000524126 SCN11AQ9UI33 1791 aa11.28□□□□□ -0.6
SPIDR-224ENST00000524126 C5orf60A6NFR6 353 aa11.27□□□□□ -0.6
SPIDR-224ENST00000524126 F8W031 263 aaPredicted RBP11.27□□□□□ -0.6
SPIDR-224ENST00000524126 HEXIM1O94992 359 aaKnown RBP11.27□□□□□ -0.6
SPIDR-224ENST00000524126 ECEL1O95672 775 aa11.27□□□□□ -0.6
SPIDR-224ENST00000524126 TOB1P50616 345 aaPredicted RBP11.27□□□□□ -0.6
SPIDR-224ENST00000524126 KCNJ2P63252 427 aa11.27□□□□□ -0.6
SPIDR-224ENST00000524126 PAK2Q13177 524 aa11.27□□□□□ -0.6
SPIDR-224ENST00000524126 TNNI3KQ59H18 835 aa11.27□□□□□ -0.6
SPIDR-224ENST00000524126 PPP1R15BQ5SWA1 713 aa11.27□□□□□ -0.6
SPIDR-224ENST00000524126 ZNF790Q6PG37 636 aa11.27□□□□□ -0.6
SPIDR-224ENST00000524126 CRELD2Q6UXH1 353 aaPredicted RBP11.27□□□□□ -0.6
SPIDR-224ENST00000524126 KRT26Q7Z3Y9 468 aa11.27□□□□□ -0.6
SPIDR-224ENST00000524126 SPATA21Q7Z572 469 aa11.27□□□□□ -0.6
SPIDR-224ENST00000524126 CD302Q8IX05 232 aa11.27□□□□□ -0.6
SPIDR-224ENST00000524126 NKX2-3Q8TAU0 364 aa11.27□□□□□ -0.6
SPIDR-224ENST00000524126 LIMA1Q9UHB6 759 aaKnown RBP11.27□□□□□ -0.6
SPIDR-224ENST00000524126 DENND2AQ9ULE3 1009 aa11.27□□□□□ -0.6
SPIDR-224ENST00000524126 FPGT-TNNI3KV9GXZ4 949 aa11.27□□□□□ -0.6
SPIDR-224ENST00000524126 SH3TC1Q8TE82 1336 aa11.27□□□□□ -0.6
SPIDR-224ENST00000524126 MYH13Q9UKX3 1938 aa11.27□□□□□ -0.61
SPIDR-224ENST00000524126 C5P01031 1676 aa11.27□□□□□ -0.61
SPIDR-224ENST00000524126 DCDC2CA8MYV0 355 aa11.27□□□□□ -0.61
SPIDR-224ENST00000524126 EVI5O60447 810 aa11.27□□□□□ -0.61
SPIDR-224ENST00000524126 RNF8O76064 485 aa11.27□□□□□ -0.61
SPIDR-224ENST00000524126 TRIM37O94972 964 aa11.27□□□□□ -0.61
SPIDR-224ENST00000524126 GHRP10912 638 aa11.27□□□□□ -0.61
SPIDR-224ENST00000524126 DRD4P21917 467 aa11.27□□□□□ -0.61
SPIDR-224ENST00000524126 DNA2P51530 1060 aa11.27□□□□□ -0.61
SPIDR-224ENST00000524126 CDC37Q16543 378 aaPredicted RBP11.27□□□□□ -0.61
SPIDR-224ENST00000524126 EPHA10Q5JZY3 1008 aa11.27□□□□□ -0.61
SPIDR-224ENST00000524126 GKAP1Q5VSY0 366 aaPredicted RBP11.27□□□□□ -0.61
SPIDR-224ENST00000524126 TRIM68Q6AZZ1 485 aa11.27□□□□□ -0.61
SPIDR-224ENST00000524126 FNBP4Q8N3X1 1017 aaPredicted RBP11.27□□□□□ -0.61
SPIDR-224ENST00000524126 ZCRB1Q8TBF4 217 aaKnown RBP11.27□□□□□ -0.61
SPIDR-224ENST00000524126 CASKIN2Q8WXE0 1202 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms