RNA–Protein interactions for RNA: ENST00000517625.5

SKP1-203, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 3 BASIC

Gene SKP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-203ENST00000517625 ERVK13-1Q9NX77 482 aa4.5□□□□□ -1.69
SKP1-203ENST00000517625 MINPP1Q9UNW1 487 aa4.5□□□□□ -1.69
SKP1-203ENST00000517625 MRPL42Q9Y6G3 142 aaKnown RBP4.5□□□□□ -1.69
SKP1-203ENST00000517625 A0A1W2PQ45 241 aaPredicted RBP4.49□□□□□ -1.69
SKP1-203ENST00000517625 A0A1W2PQY0 241 aa4.49□□□□□ -1.69
SKP1-203ENST00000517625 FITM1A5D6W6 292 aa4.49□□□□□ -1.69
SKP1-203ENST00000517625 TBX1O43435 398 aa4.49□□□□□ -1.69
SKP1-203ENST00000517625 EFCAB14O75071 495 aa4.49□□□□□ -1.69
SKP1-203ENST00000517625 APPP05067 770 aa4.49□□□□□ -1.69
SKP1-203ENST00000517625 IFNGR1P15260 489 aa4.49□□□□□ -1.69
SKP1-203ENST00000517625 PAMP19021 973 aa4.49□□□□□ -1.69
SKP1-203ENST00000517625 KCNJ6P48051 423 aa4.49□□□□□ -1.69
SKP1-203ENST00000517625 BNIP3Q12983 259 aa4.49□□□□□ -1.69
SKP1-203ENST00000517625 SQSTM1Q13501 440 aa4.49□□□□□ -1.69
SKP1-203ENST00000517625 NR0B2Q15466 257 aa4.49□□□□□ -1.69
SKP1-203ENST00000517625 TCEA2Q15560 299 aa4.49□□□□□ -1.69
SKP1-203ENST00000517625 HLA-DQA1Q5Y7H0 255 aa4.49□□□□□ -1.69
SKP1-203ENST00000517625 NFXL1Q6ZNB6 911 aa4.49□□□□□ -1.69
SKP1-203ENST00000517625 MAMDC2Q7Z304 686 aaPredicted RBP4.49□□□□□ -1.69
SKP1-203ENST00000517625 SPPL2CQ8IUH8 684 aa4.49□□□□□ -1.69
SKP1-203ENST00000517625 NLGN1Q8N2Q7 840 aa4.49□□□□□ -1.69
SKP1-203ENST00000517625 OXR1Q8N573 874 aa4.49□□□□□ -1.69
SKP1-203ENST00000517625 PDZD8Q8NEN9 1154 aa4.49□□□□□ -1.69
SKP1-203ENST00000517625 NPLOC4Q8TAT6 608 aa4.49□□□□□ -1.69
SKP1-203ENST00000517625 PI4K2BQ8TCG2 481 aa4.49□□□□□ -1.69
SKP1-203ENST00000517625 LINC01599Q8WXQ3 324 aa4.49□□□□□ -1.69
SKP1-203ENST00000517625 OSBP2Q969R2 916 aa4.49□□□□□ -1.69
SKP1-203ENST00000517625 C1orf159Q96HA4 380 aa4.49□□□□□ -1.69
SKP1-203ENST00000517625 FEZ1Q99689 392 aa4.49□□□□□ -1.69
SKP1-203ENST00000517625 AP5S1Q9NUS5 200 aa4.49□□□□□ -1.69
SKP1-203ENST00000517625 MRPS23Q9Y3D9 190 aaKnown RBP4.49□□□□□ -1.69
SKP1-203ENST00000517625 WASH4PA8MWX3 477 aa4.48□□□□□ -1.69
SKP1-203ENST00000517625 PLD2O14939 933 aa4.48□□□□□ -1.69
SKP1-203ENST00000517625 MEFVO15553 781 aaPredicted RBP4.48□□□□□ -1.69
SKP1-203ENST00000517625 PRODHO43272 600 aa4.48□□□□□ -1.69
SKP1-203ENST00000517625 KCNQ2O43526 872 aa4.48□□□□□ -1.69
SKP1-203ENST00000517625 HYAL3O43820 417 aaPredicted RBP4.48□□□□□ -1.69
SKP1-203ENST00000517625 DLX3O60479 287 aa4.48□□□□□ -1.69
SKP1-203ENST00000517625 VAMP4O75379 141 aa4.48□□□□□ -1.69
SKP1-203ENST00000517625 RFPL3O75679 317 aa4.48□□□□□ -1.69
SKP1-203ENST00000517625 THBDP07204 575 aa4.48□□□□□ -1.69
SKP1-203ENST00000517625 ZGLP1P0C6A0 271 aa4.48□□□□□ -1.69
SKP1-203ENST00000517625 RAC2P15153 192 aa4.48□□□□□ -1.69
SKP1-203ENST00000517625 RPL10P27635 214 aaKnown RBP4.48□□□□□ -1.69
SKP1-203ENST00000517625 LTBRP36941 435 aa4.48□□□□□ -1.69
SKP1-203ENST00000517625 GDNFP39905 211 aa4.48□□□□□ -1.69
SKP1-203ENST00000517625 GABREP78334 506 aa4.48□□□□□ -1.69
SKP1-203ENST00000517625 PLCL1Q15111 1095 aa4.48□□□□□ -1.69
SKP1-203ENST00000517625 DPY19L1Q2PZI1 675 aa4.48□□□□□ -1.69
SKP1-203ENST00000517625 FNDC3BQ53EP0 1204 aaKnown RBP4.48□□□□□ -1.69
SKP1-203ENST00000517625 TRIM61Q5EBN2 209 aa4.48□□□□□ -1.69
SKP1-203ENST00000517625 ZNF574Q6ZN55 896 aaPredicted RBP4.48□□□□□ -1.69
SKP1-203ENST00000517625 TP53INP2Q8IXH6 220 aa4.48□□□□□ -1.69
SKP1-203ENST00000517625 LILRA2Q8N149 483 aa4.48□□□□□ -1.69
SKP1-203ENST00000517625 TMEM145Q8NBT3 493 aa4.48□□□□□ -1.69
SKP1-203ENST00000517625 DCAF4Q8WV16 495 aa4.48□□□□□ -1.69
SKP1-203ENST00000517625 EXOC2Q96KP1 924 aa4.48□□□□□ -1.69
SKP1-203ENST00000517625 MCMBPQ9BTE3 642 aa4.48□□□□□ -1.69
SKP1-203ENST00000517625 G6PC3Q9BUM1 346 aa4.48□□□□□ -1.69
SKP1-203ENST00000517625 ZFP64Q9NPA5 681 aa4.48□□□□□ -1.69
SKP1-203ENST00000517625 FANCLQ9NW38 375 aa4.48□□□□□ -1.69
SKP1-203ENST00000517625 SLAMF8Q9P0V8 285 aa4.48□□□□□ -1.69
SKP1-203ENST00000517625 PLAAQ9Y263 795 aa4.48□□□□□ -1.69
SKP1-203ENST00000517625 NPFFR2Q9Y5X5 522 aa4.48□□□□□ -1.69
SKP1-203ENST00000517625 CADPSQ9ULU8 1353 aa4.48□□□□□ -1.69
SKP1-203ENST00000517625 SHROOM4Q9ULL8 1493 aa4.48□□□□□ -1.69
SKP1-203ENST00000517625 NPHP3-ACAD11A0A0J9YXS1 232 aa4.47□□□□□ -1.69
SKP1-203ENST00000517625 SCO2A0A1W2PP80 73 aa4.47□□□□□ -1.69
SKP1-203ENST00000517625 ESYT3A0FGR9 886 aa4.47□□□□□ -1.69
SKP1-203ENST00000517625 WTIPA6NIX2 430 aaPredicted RBP4.47□□□□□ -1.69
SKP1-203ENST00000517625 FADS2P1A8MWK0 482 aa4.47□□□□□ -1.69
SKP1-203ENST00000517625 SMARCA5O60264 1052 aaPredicted RBP4.47□□□□□ -1.69
SKP1-203ENST00000517625 FKTNO75072 461 aa4.47□□□□□ -1.69
SKP1-203ENST00000517625 CD96P40200 585 aa4.47□□□□□ -1.69
SKP1-203ENST00000517625 GTF2A2P52657 109 aa4.47□□□□□ -1.69
SKP1-203ENST00000517625 SNX17Q15036 470 aa4.47□□□□□ -1.69
SKP1-203ENST00000517625 STYK1Q6J9G0 422 aa4.47□□□□□ -1.69
SKP1-203ENST00000517625 KIAA0907Q7Z7F0 614 aaPredicted RBP4.47□□□□□ -1.69
SKP1-203ENST00000517625 PPIL6Q8IXY8 311 aa4.47□□□□□ -1.69
SKP1-203ENST00000517625 KREMEN2Q8NCW0 462 aa4.47□□□□□ -1.69
SKP1-203ENST00000517625 FLAD1Q8NFF5 587 aa4.47□□□□□ -1.69
SKP1-203ENST00000517625 FRS2Q8WU20 508 aa4.47□□□□□ -1.69
SKP1-203ENST00000517625 PTPRN2Q92932 1015 aa4.47□□□□□ -1.69
SKP1-203ENST00000517625 SLKQ9H2G2 1235 aaPredicted RBP4.47□□□□□ -1.69
SKP1-203ENST00000517625 NCOA5Q9HCD5 579 aaKnown RBP4.47□□□□□ -1.69
SKP1-203ENST00000517625 GPR27Q9NS67 375 aa4.47□□□□□ -1.69
SKP1-203ENST00000517625 AQP7O14520 342 aa4.46□□□□□ -1.7
SKP1-203ENST00000517625 MYO1BO43795 1136 aa4.46□□□□□ -1.7
SKP1-203ENST00000517625 HPXP02790 462 aa4.46□□□□□ -1.7
SKP1-203ENST00000517625 PLS3P13797 630 aa4.46□□□□□ -1.7
SKP1-203ENST00000517625 L1CAMP32004 1257 aa4.46□□□□□ -1.7
SKP1-203ENST00000517625 ECI1P42126 302 aa4.46□□□□□ -1.7
SKP1-203ENST00000517625 GRIA2P42262 883 aa4.46□□□□□ -1.7
SKP1-203ENST00000517625 CYP4F3Q08477 520 aa4.46□□□□□ -1.7
SKP1-203ENST00000517625 FAM209AQ5JX71 171 aa4.46□□□□□ -1.7
SKP1-203ENST00000517625 YOD1Q5VVQ6 348 aaPredicted RBP4.46□□□□□ -1.7
SKP1-203ENST00000517625 FOXB2Q5VYV0 432 aa4.46□□□□□ -1.7
SKP1-203ENST00000517625 GALNT18Q6P9A2 607 aa4.46□□□□□ -1.7
SKP1-203ENST00000517625 SLCO6A1Q86UG4 719 aa4.46□□□□□ -1.7
SKP1-203ENST00000517625 NLGN2Q8NFZ4 835 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms