RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 ZNF703Q9H7S9 590 aaPredicted RBP0.97□□□□□ -2.25
RNU6-539P-201ENST00000516665 WWOXQ9NZC7 414 aa0.97□□□□□ -2.25
RNU6-539P-201ENST00000516665 GPRC5BQ9NZH0 403 aa0.97□□□□□ -2.25
RNU6-539P-201ENST00000516665 FOXD3Q9UJU5 478 aaPredicted RBP0.97□□□□□ -2.25
RNU6-539P-201ENST00000516665 ZNF185O15231 689 aa0.96□□□□□ -2.26
RNU6-539P-201ENST00000516665 FKTNO75072 461 aa0.96□□□□□ -2.26
RNU6-539P-201ENST00000516665 CNOT4O95628 575 aaKnown RBP0.96□□□□□ -2.26
RNU6-539P-201ENST00000516665 AZU1P20160 251 aa0.96□□□□□ -2.26
RNU6-539P-201ENST00000516665 CAP2P40123 477 aa0.96□□□□□ -2.26
RNU6-539P-201ENST00000516665 C8orf34Q49A92 452 aa0.96□□□□□ -2.26
RNU6-539P-201ENST00000516665 LCE3CQ5T5A8 94 aa0.96□□□□□ -2.26
RNU6-539P-201ENST00000516665 USPL1Q5W0Q7 1092 aa0.96□□□□□ -2.26
RNU6-539P-201ENST00000516665 HEATR6Q6AI08 1181 aaKnown RBP0.96□□□□□ -2.26
RNU6-539P-201ENST00000516665 STK32CQ86UX6 486 aa0.96□□□□□ -2.26
RNU6-539P-201ENST00000516665 GIMAP8Q8ND71 665 aaPredicted RBP0.96□□□□□ -2.26
RNU6-539P-201ENST00000516665 LRRC37BQ96QE4 947 aa0.96□□□□□ -2.26
RNU6-539P-201ENST00000516665 TMEFF2Q9UIK5 374 aaPredicted RBP0.96□□□□□ -2.26
RNU6-539P-201ENST00000516665 CACNA1IQ9P0X4 2223 aa0.96□□□□□ -2.26
RNU6-539P-201ENST00000516665 POLR2AP24928 1970 aaKnown RBP0.96□□□□□ -2.26
RNU6-539P-201ENST00000516665 RBM47A0AV96 593 aaKnown RBP0.95□□□□□ -2.26
RNU6-539P-201ENST00000516665 PRAMEF27A3QJZ7 478 aa0.95□□□□□ -2.26
RNU6-539P-201ENST00000516665 F8W031 263 aaPredicted RBP0.95□□□□□ -2.26
RNU6-539P-201ENST00000516665 SRGAP3O43295 1099 aa0.95□□□□□ -2.26
RNU6-539P-201ENST00000516665 TNFRSF21O75509 655 aa0.95□□□□□ -2.26
RNU6-539P-201ENST00000516665 RPS6KA4O75676 772 aa0.95□□□□□ -2.26
RNU6-539P-201ENST00000516665 CST3P01034 146 aaPredicted RBP0.95□□□□□ -2.26
RNU6-539P-201ENST00000516665 MT3P25713 68 aa0.95□□□□□ -2.26
RNU6-539P-201ENST00000516665 DNAJA1P31689 397 aaKnown RBP0.95□□□□□ -2.26
RNU6-539P-201ENST00000516665 ETV3P41162 512 aa0.95□□□□□ -2.26
RNU6-539P-201ENST00000516665 CACNB2Q08289 660 aaPredicted RBP0.95□□□□□ -2.26
RNU6-539P-201ENST00000516665 DPYDQ12882 1025 aa0.95□□□□□ -2.26
RNU6-539P-201ENST00000516665 NPNTQ6UXI9 565 aa0.95□□□□□ -2.26
RNU6-539P-201ENST00000516665 RNF111Q6ZNA4 994 aa0.95□□□□□ -2.26
RNU6-539P-201ENST00000516665 USHBP1Q8N6Y0 703 aa0.95□□□□□ -2.26
RNU6-539P-201ENST00000516665 ADAMTS19Q8TE59 1207 aa0.95□□□□□ -2.26
RNU6-539P-201ENST00000516665 DPH2Q9BQC3 489 aaPredicted RBP0.95□□□□□ -2.26
RNU6-539P-201ENST00000516665 ZNF70Q9UC06 446 aaPredicted RBP0.95□□□□□ -2.26
RNU6-539P-201ENST00000516665 AMOTL2Q9Y2J4 779 aa0.95□□□□□ -2.26
RNU6-539P-201ENST00000516665 TCF20Q9UGU0 1960 aaKnown RBP0.95□□□□□ -2.26
RNU6-539P-201ENST00000516665 NTN3O00634 580 aaPredicted RBP0.94□□□□□ -2.26
RNU6-539P-201ENST00000516665 NTN1O95631 604 aa0.94□□□□□ -2.26
RNU6-539P-201ENST00000516665 IGKV2-30P06310 120 aa0.94□□□□□ -2.26
RNU6-539P-201ENST00000516665 C8BP07358 591 aa0.94□□□□□ -2.26
RNU6-539P-201ENST00000516665 PTH2RP49190 550 aa0.94□□□□□ -2.26
RNU6-539P-201ENST00000516665 MAMDC4Q6UXC1 1216 aa0.94□□□□□ -2.26
RNU6-539P-201ENST00000516665 SULF2Q8IWU5 870 aa0.94□□□□□ -2.26
RNU6-539P-201ENST00000516665 ZNF808Q8N4W9 903 aaPredicted RBP0.94□□□□□ -2.26
RNU6-539P-201ENST00000516665 DNAJB8Q8NHS0 232 aa0.94□□□□□ -2.26
RNU6-539P-201ENST00000516665 CPA5Q8WXQ8 436 aa0.94□□□□□ -2.26
RNU6-539P-201ENST00000516665 DDRGK1Q96HY6 314 aa0.94□□□□□ -2.26
RNU6-539P-201ENST00000516665 KREMEN1Q96MU8 473 aa0.94□□□□□ -2.26
RNU6-539P-201ENST00000516665 CACNA2D2Q9NY47 1150 aa0.94□□□□□ -2.26
RNU6-539P-201ENST00000516665 TNFRSF10DQ9UBN6 386 aa0.94□□□□□ -2.26
RNU6-539P-201ENST00000516665 ZNF777Q9ULD5 760 aaPredicted RBP0.94□□□□□ -2.26
RNU6-539P-201ENST00000516665 KCNH3Q9ULD8 1083 aa0.94□□□□□ -2.26
RNU6-539P-201ENST00000516665 A0A1B0GVY2 172 aa0.93□□□□□ -2.26
RNU6-539P-201ENST00000516665 GRID2IPA4D2P6 1211 aa0.93□□□□□ -2.26
RNU6-539P-201ENST00000516665 CYP2C8P10632 490 aa0.93□□□□□ -2.26
RNU6-539P-201ENST00000516665 ZNF28P17035 718 aa0.93□□□□□ -2.26
RNU6-539P-201ENST00000516665 FOXG1P55316 489 aaPredicted RBP0.93□□□□□ -2.26
RNU6-539P-201ENST00000516665 PCOLCEQ15113 449 aa0.93□□□□□ -2.26
RNU6-539P-201ENST00000516665 WASHC4Q2M389 1173 aa0.93□□□□□ -2.26
RNU6-539P-201ENST00000516665 NBPF9Q3BBW0 867 aa0.93□□□□□ -2.26
RNU6-539P-201ENST00000516665 BBS9Q3SYG4 887 aa0.93□□□□□ -2.26
RNU6-539P-201ENST00000516665 USP48Q86UV5 1035 aa0.93□□□□□ -2.26
RNU6-539P-201ENST00000516665 TAX1BP1Q86VP1 789 aa0.93□□□□□ -2.26
RNU6-539P-201ENST00000516665 KRT78Q8N1N4 520 aa0.93□□□□□ -2.26
RNU6-539P-201ENST00000516665 KYQ8NBH2 561 aa0.93□□□□□ -2.26
RNU6-539P-201ENST00000516665 SNX29Q8TEQ0 813 aa0.93□□□□□ -2.26
RNU6-539P-201ENST00000516665 EDEM1Q92611 657 aa0.93□□□□□ -2.26
RNU6-539P-201ENST00000516665 FCRL2Q96LA5 508 aaPredicted RBP0.93□□□□□ -2.26
RNU6-539P-201ENST00000516665 PCMTD1Q96MG8 357 aaPredicted RBP0.93□□□□□ -2.26
RNU6-539P-201ENST00000516665 YTHDC1Q96MU7 727 aaKnown RBP0.93□□□□□ -2.26
RNU6-539P-201ENST00000516665 LMF1Q96S06 567 aa0.93□□□□□ -2.26
RNU6-539P-201ENST00000516665 JMJD8Q96S16 334 aa0.93□□□□□ -2.26
RNU6-539P-201ENST00000516665 RXFP1Q9HBX9 757 aa0.93□□□□□ -2.26
RNU6-539P-201ENST00000516665 DBR1Q9UK59 544 aaKnown RBP0.93□□□□□ -2.26
RNU6-539P-201ENST00000516665 TCFL5Q9UL49 500 aa0.93□□□□□ -2.26
RNU6-539P-201ENST00000516665 ZKSCAN5Q9Y2L8 839 aa0.93□□□□□ -2.26
RNU6-539P-201ENST00000516665 COL11A2P13942 1736 aaPredicted RBP0.92□□□□□ -2.26
RNU6-539P-201ENST00000516665 WDR91A4D1P6 747 aa0.92□□□□□ -2.26
RNU6-539P-201ENST00000516665 BMP15O95972 392 aa0.92□□□□□ -2.26
RNU6-539P-201ENST00000516665 C1RP00736 705 aa0.92□□□□□ -2.26
RNU6-539P-201ENST00000516665 ABL2P42684 1182 aa0.92□□□□□ -2.26
RNU6-539P-201ENST00000516665 SSBP2P81877 361 aaPredicted RBP0.92□□□□□ -2.26
RNU6-539P-201ENST00000516665 ZNF252P-AS1Q0IIN9 211 aa0.92□□□□□ -2.26
RNU6-539P-201ENST00000516665 CAPN12Q6ZSI9 719 aa0.92□□□□□ -2.26
RNU6-539P-201ENST00000516665 LRP10Q7Z4F1 713 aa0.92□□□□□ -2.26
RNU6-539P-201ENST00000516665 MRGPREQ86SM8 312 aa0.92□□□□□ -2.26
RNU6-539P-201ENST00000516665 TMPRSS12Q86WS5 348 aa0.92□□□□□ -2.26
RNU6-539P-201ENST00000516665 SPEM1Q8N4L4 309 aa0.92□□□□□ -2.26
RNU6-539P-201ENST00000516665 ARXQ96QS3 562 aa0.92□□□□□ -2.26
RNU6-539P-201ENST00000516665 SPATA5L1Q9BVQ7 753 aa0.92□□□□□ -2.26
RNU6-539P-201ENST00000516665 TMEM168Q9H0V1 697 aa0.92□□□□□ -2.26
RNU6-539P-201ENST00000516665 ALG2Q9H553 416 aa0.92□□□□□ -2.26
RNU6-539P-201ENST00000516665 A0A1W2PQ45 241 aaPredicted RBP0.91□□□□□ -2.26
RNU6-539P-201ENST00000516665 A0A1W2PQY0 241 aa0.91□□□□□ -2.26
RNU6-539P-201ENST00000516665 RBMXL2O75526 392 aaKnown RBP0.91□□□□□ -2.26
RNU6-539P-201ENST00000516665 RPLP1P05386 114 aaKnown RBP0.91□□□□□ -2.26
RNU6-539P-201ENST00000516665 SLC25A3Q00325 362 aa0.91□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms