RNA–Protein interactions for RNA: ENST00000513873.1

CLDND1-228, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-228ENST00000513873 TNNI3KQ59H18 835 aa6.24□□□□□ -1.41
CLDND1-228ENST00000513873 ZNF772Q68DY9 489 aaPredicted RBP6.24□□□□□ -1.41
CLDND1-228ENST00000513873 ZNF574Q6ZN55 896 aaPredicted RBP6.24□□□□□ -1.41
CLDND1-228ENST00000513873 CREG2Q8IUH2 290 aa6.24□□□□□ -1.41
CLDND1-228ENST00000513873 TMEM192Q8IY95 271 aa6.24□□□□□ -1.41
CLDND1-228ENST00000513873 C19orf47Q8N9M1 422 aaKnown RBP6.24□□□□□ -1.41
CLDND1-228ENST00000513873 FAM84AQ96KN4 292 aa6.24□□□□□ -1.41
CLDND1-228ENST00000513873 SEMA3GQ9NS98 782 aa6.24□□□□□ -1.41
CLDND1-228ENST00000513873 PPP1R1BQ9UD71 204 aaPredicted RBP6.24□□□□□ -1.41
CLDND1-228ENST00000513873 DUSP13Q9UII6 198 aa6.24□□□□□ -1.41
CLDND1-228ENST00000513873 PCDHB12Q9Y5F1 795 aa6.24□□□□□ -1.41
CLDND1-228ENST00000513873 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.24□□□□□ -1.41
CLDND1-228ENST00000513873 PTPN23Q9H3S7 1636 aa6.24□□□□□ -1.41
CLDND1-228ENST00000513873 DAPK1P53355 1430 aa6.24□□□□□ -1.41
CLDND1-228ENST00000513873 KIAA1107Q9UPP5 1409 aa6.24□□□□□ -1.41
CLDND1-228ENST00000513873 KIDINS220Q9ULH0 1771 aa6.23□□□□□ -1.41
CLDND1-228ENST00000513873 CDK12Q9NYV4 1490 aaPredicted RBP6.23□□□□□ -1.41
CLDND1-228ENST00000513873 XIRP1Q702N8 1843 aaKnown RBP6.23□□□□□ -1.41
CLDND1-228ENST00000513873 DHX57Q6P158 1386 aaKnown RBP6.23□□□□□ -1.41
CLDND1-228ENST00000513873 CD96P40200 585 aa6.23□□□□□ -1.41
CLDND1-228ENST00000513873 NMIQ13287 307 aaPredicted RBP6.23□□□□□ -1.41
CLDND1-228ENST00000513873 TCEAL1Q15170 157 aa6.23□□□□□ -1.41
CLDND1-228ENST00000513873 NBPF9Q3BBW0 867 aa6.23□□□□□ -1.41
CLDND1-228ENST00000513873 GNPTABQ3T906 1256 aa6.23□□□□□ -1.41
CLDND1-228ENST00000513873 NAALADL2Q58DX5 795 aa6.23□□□□□ -1.41
CLDND1-228ENST00000513873 NOL9Q5SY16 702 aaKnown RBP6.23□□□□□ -1.41
CLDND1-228ENST00000513873 SLC23A3Q6PIS1 610 aa6.23□□□□□ -1.41
CLDND1-228ENST00000513873 NFXL1Q6ZNB6 911 aa6.23□□□□□ -1.41
CLDND1-228ENST00000513873 TTC6Q86TZ1 520 aa6.23□□□□□ -1.41
CLDND1-228ENST00000513873 FAM168AQ92567 244 aa6.23□□□□□ -1.41
CLDND1-228ENST00000513873 SHDQ96IW2 340 aa6.23□□□□□ -1.41
CLDND1-228ENST00000513873 TINF2Q9BSI4 451 aa6.23□□□□□ -1.41
CLDND1-228ENST00000513873 DUSP15Q9H1R2 295 aaPredicted RBP6.23□□□□□ -1.41
CLDND1-228ENST00000513873 PHAXQ9H814 394 aaKnown RBP6.23□□□□□ -1.41
CLDND1-228ENST00000513873 CARS2Q9HA77 564 aaKnown RBP6.23□□□□□ -1.41
CLDND1-228ENST00000513873 RRP7BPQ9NSQ0 103 aa6.23□□□□□ -1.41
CLDND1-228ENST00000513873 ACRP10323 421 aa6.22□□□□□ -1.41
CLDND1-228ENST00000513873 FUT4P22083 530 aa6.22□□□□□ -1.41
CLDND1-228ENST00000513873 RAP1GAPP47736 663 aa6.22□□□□□ -1.41
CLDND1-228ENST00000513873 AUHQ13825 339 aaKnown RBP6.22□□□□□ -1.41
CLDND1-228ENST00000513873 ATG4DQ86TL0 474 aaPredicted RBP6.22□□□□□ -1.41
CLDND1-228ENST00000513873 TSPYL5Q86VY4 417 aaPredicted RBP6.22□□□□□ -1.41
CLDND1-228ENST00000513873 THEMISQ8N1K5 641 aaPredicted RBP6.22□□□□□ -1.41
CLDND1-228ENST00000513873 VWCEQ96DN2 955 aa6.22□□□□□ -1.41
CLDND1-228ENST00000513873 KRTAP9-8Q9BYQ0 159 aa6.22□□□□□ -1.41
CLDND1-228ENST00000513873 MRVI1Q9Y6F6 885 aa6.22□□□□□ -1.41
CLDND1-228ENST00000513873 IQGAP1P46940 1657 aa6.22□□□□□ -1.41
CLDND1-228ENST00000513873 ABCC5O15440 1437 aa6.22□□□□□ -1.41
CLDND1-228ENST00000513873 NAIPQ13075 1403 aa6.22□□□□□ -1.41
CLDND1-228ENST00000513873 CAMSAP2Q08AD1 1489 aa6.22□□□□□ -1.41
CLDND1-228ENST00000513873 ITSN2Q9NZM3 1697 aa6.21□□□□□ -1.42
CLDND1-228ENST00000513873 A0A1W2PQH9 124 aa6.21□□□□□ -1.42
CLDND1-228ENST00000513873 TP53P04637 393 aaPredicted RBP6.21□□□□□ -1.42
CLDND1-228ENST00000513873 CASP7P55210 303 aa6.21□□□□□ -1.42
CLDND1-228ENST00000513873 SLC7A5Q01650 507 aa6.21□□□□□ -1.42
CLDND1-228ENST00000513873 SIAH1Q8IUQ4 282 aa6.21□□□□□ -1.42
CLDND1-228ENST00000513873 ZNF655Q8N720 491 aaPredicted RBP6.21□□□□□ -1.42
CLDND1-228ENST00000513873 SYTL5Q8TDW5 730 aaPredicted RBP6.21□□□□□ -1.42
CLDND1-228ENST00000513873 DSCC1Q9BVC3 393 aa6.21□□□□□ -1.42
CLDND1-228ENST00000513873 PRDM14Q9GZV8 571 aa6.21□□□□□ -1.42
CLDND1-228ENST00000513873 FAM86C1Q9NVL1 165 aa6.21□□□□□ -1.42
CLDND1-228ENST00000513873 ZNF214Q9UL59 606 aaPredicted RBP6.21□□□□□ -1.42
CLDND1-228ENST00000513873 NPHP4O75161 1426 aaPredicted RBP6.21□□□□□ -1.42
CLDND1-228ENST00000513873 ZNF644Q9H582 1327 aaPredicted RBP6.21□□□□□ -1.42
CLDND1-228ENST00000513873 ARHGAP5Q13017 1502 aa6.2□□□□□ -1.42
CLDND1-228ENST00000513873 SRFP11831 508 aa6.2□□□□□ -1.42
CLDND1-228ENST00000513873 HNRNPMP52272 730 aaKnown RBP eCLIP6.2□□□□□ -1.42
CLDND1-228ENST00000513873 PCBP3P57721 371 aaKnown RBP6.2□□□□□ -1.42
CLDND1-228ENST00000513873 EGR3Q06889 387 aa6.2□□□□□ -1.42
CLDND1-228ENST00000513873 ZYXQ15942 572 aaKnown RBP6.2□□□□□ -1.42
CLDND1-228ENST00000513873 ZNF792Q3KQV3 632 aa6.2□□□□□ -1.42
CLDND1-228ENST00000513873 TDRD10Q5VZ19 366 aaKnown RBP6.2□□□□□ -1.42
CLDND1-228ENST00000513873 C7orf61Q8IZ16 206 aa6.2□□□□□ -1.42
CLDND1-228ENST00000513873 DAGLBQ8NCG7 672 aa6.2□□□□□ -1.42
CLDND1-228ENST00000513873 DHX38Q92620 1227 aaKnown RBP6.2□□□□□ -1.42
CLDND1-228ENST00000513873 KRTAP9-3Q9BYQ3 159 aa6.2□□□□□ -1.42
CLDND1-228ENST00000513873 GBP3Q9H0R5 595 aa6.2□□□□□ -1.42
CLDND1-228ENST00000513873 RC3H2Q9HBD1 1191 aaKnown RBP6.2□□□□□ -1.42
CLDND1-228ENST00000513873 CHST7Q9NS84 486 aa6.2□□□□□ -1.42
CLDND1-228ENST00000513873 ACTR10Q9NZ32 417 aa6.2□□□□□ -1.42
CLDND1-228ENST00000513873 RAPGEFL1Q9UHV5 662 aa6.2□□□□□ -1.42
CLDND1-228ENST00000513873 ROBO1Q9Y6N7 1651 aa6.2□□□□□ -1.42
CLDND1-228ENST00000513873 JCADQ9P266 1359 aa6.19□□□□□ -1.42
CLDND1-228ENST00000513873 CDC42BPBQ9Y5S2 1711 aa6.19□□□□□ -1.42
CLDND1-228ENST00000513873 SIGLEC6O43699 453 aa6.19□□□□□ -1.42
CLDND1-228ENST00000513873 NAT2P11245 290 aa6.19□□□□□ -1.42
CLDND1-228ENST00000513873 ATP2B1P20020 1258 aa6.19□□□□□ -1.42
CLDND1-228ENST00000513873 CWF19L1Q69YN2 538 aaKnown RBP6.19□□□□□ -1.42
CLDND1-228ENST00000513873 HEATR6Q6AI08 1181 aaKnown RBP6.19□□□□□ -1.42
CLDND1-228ENST00000513873 ADAT2Q7Z6V5 191 aaKnown RBP6.19□□□□□ -1.42
CLDND1-228ENST00000513873 C8orf37Q96NL8 207 aa6.19□□□□□ -1.42
CLDND1-228ENST00000513873 ALPK1Q96QP1 1244 aa6.19□□□□□ -1.42
CLDND1-228ENST00000513873 MPHOSPH9Q99550 1183 aa6.19□□□□□ -1.42
CLDND1-228ENST00000513873 TANGO6Q9C0B7 1094 aa6.19□□□□□ -1.42
CLDND1-228ENST00000513873 PRR13Q9NZ81 148 aa6.19□□□□□ -1.42
CLDND1-228ENST00000513873 SLAMF8Q9P0V8 285 aa6.19□□□□□ -1.42
CLDND1-228ENST00000513873 PRKAG3Q9UGI9 489 aa6.19□□□□□ -1.42
CLDND1-228ENST00000513873 CCDC141Q6ZP82 1450 aa6.19□□□□□ -1.42
CLDND1-228ENST00000513873 SPAG9O60271 1321 aaKnown RBP6.19□□□□□ -1.42
CLDND1-228ENST00000513873 TONSLQ96HA7 1378 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms