RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 RIOX1Q9H6W3 641 aa16.33■□□□□ 0.2
DDX41-208ENST00000507955 LTBP1Q14766 1721 aa16.33■□□□□ 0.2
DDX41-208ENST00000507955 NKRFO15226 690 aaKnown RBP eCLIP16.32■□□□□ 0.2
DDX41-208ENST00000507955 KLRC4O43908 158 aa16.32■□□□□ 0.2
DDX41-208ENST00000507955 OR52Z1P0C646 297 aa16.32■□□□□ 0.2
DDX41-208ENST00000507955 AKR1B15C9JRZ8 316 aaPredicted RBP16.32■□□□□ 0.2
DDX41-208ENST00000507955 GYPCP04921 128 aa16.32■□□□□ 0.2
DDX41-208ENST00000507955 GNA11P29992 359 aa16.32■□□□□ 0.2
DDX41-208ENST00000507955 CHRNA5P30532 468 aa16.32■□□□□ 0.2
DDX41-208ENST00000507955 PBX1P40424 430 aa16.32■□□□□ 0.2
DDX41-208ENST00000507955 RAD9BQ6WBX8 426 aa16.32■□□□□ 0.2
DDX41-208ENST00000507955 IRF2BP1Q8IU81 584 aa16.32■□□□□ 0.2
DDX41-208ENST00000507955 CERS3Q8IU89 383 aa16.32■□□□□ 0.2
DDX41-208ENST00000507955 ADGRF4Q8IZF3 695 aa16.32■□□□□ 0.2
DDX41-208ENST00000507955 AKT1S1Q96B36 256 aa16.32■□□□□ 0.2
DDX41-208ENST00000507955 DNAJC18Q9H819 358 aa16.32■□□□□ 0.2
DDX41-208ENST00000507955 MRPL44Q9H9J2 332 aaKnown RBP16.32■□□□□ 0.2
DDX41-208ENST00000507955 JMJD4Q9H9V9 463 aa16.32■□□□□ 0.2
DDX41-208ENST00000507955 PES1O00541 588 aaKnown RBP16.32■□□□□ 0.2
DDX41-208ENST00000507955 FCER1AP12319 257 aa16.32■□□□□ 0.2
DDX41-208ENST00000507955 GALNT17Q6IS24 598 aa16.32■□□□□ 0.2
DDX41-208ENST00000507955 KRT25Q7Z3Z0 450 aa16.32■□□□□ 0.2
DDX41-208ENST00000507955 MMTAG2Q9BU76 263 aaKnown RBP16.32■□□□□ 0.2
DDX41-208ENST00000507955 RWDD2AQ9UIY3 292 aa16.32■□□□□ 0.2
DDX41-208ENST00000507955 DDTLA6NHG4 134 aaPredicted RBP16.31■□□□□ 0.2
DDX41-208ENST00000507955 POTEMA6NI47 508 aa16.31■□□□□ 0.2
DDX41-208ENST00000507955 KCNJ18B7U540 433 aa16.31■□□□□ 0.2
DDX41-208ENST00000507955 USP17L10C9JJH3 530 aa16.31■□□□□ 0.2
DDX41-208ENST00000507955 STX10O60499 249 aa16.31■□□□□ 0.2
DDX41-208ENST00000507955 ABL1P00519 1130 aa16.31■□□□□ 0.2
DDX41-208ENST00000507955 CRKP46108 304 aa16.31■□□□□ 0.2
DDX41-208ENST00000507955 NOVP48745 357 aa16.31■□□□□ 0.2
DDX41-208ENST00000507955 SNAP25P60880 206 aa16.31■□□□□ 0.2
DDX41-208ENST00000507955 KCNJ12Q14500 433 aa16.31■□□□□ 0.2
DDX41-208ENST00000507955 CCDC96Q2M329 555 aa16.31■□□□□ 0.2
DDX41-208ENST00000507955 PPFIBP1Q86W92 1011 aa16.31■□□□□ 0.2
DDX41-208ENST00000507955 KRT222Q8N1A0 295 aa16.31■□□□□ 0.2
DDX41-208ENST00000507955 TEKT1Q969V4 418 aa16.31■□□□□ 0.2
DDX41-208ENST00000507955 NUDT12Q9BQG2 462 aa16.31■□□□□ 0.2
DDX41-208ENST00000507955 LZTFL1Q9NQ48 299 aa16.31■□□□□ 0.2
DDX41-208ENST00000507955 KBTBD4Q9NVX7 518 aa16.31■□□□□ 0.2
DDX41-208ENST00000507955 PARP3Q9Y6F1 533 aa16.31■□□□□ 0.2
DDX41-208ENST00000507955 URI1O94763 535 aaPredicted RBP16.31■□□□□ 0.2
DDX41-208ENST00000507955 TTLL1O95922 423 aa16.31■□□□□ 0.2
DDX41-208ENST00000507955 TAL1P17542 331 aaPredicted RBP16.31■□□□□ 0.2
DDX41-208ENST00000507955 TNNI2P48788 182 aa16.31■□□□□ 0.2
DDX41-208ENST00000507955 TCP11X2Q5H9J9 407 aa16.31■□□□□ 0.2
DDX41-208ENST00000507955 PHLPP2Q6ZVD8 1323 aa16.3■□□□□ 0.2
DDX41-208ENST00000507955 IGKV6D-41A0A0C4DH26 115 aa16.3■□□□□ 0.2
DDX41-208ENST00000507955 KIF20AO95235 890 aa16.3■□□□□ 0.2
DDX41-208ENST00000507955 CLCN6P51797 869 aa16.3■□□□□ 0.2
DDX41-208ENST00000507955 COPB1P53618 953 aaKnown RBP16.3■□□□□ 0.2
DDX41-208ENST00000507955 STK4Q13043 487 aa16.3■□□□□ 0.2
DDX41-208ENST00000507955 ADSSL1Q8N142 457 aa16.3■□□□□ 0.2
DDX41-208ENST00000507955 CCDC12Q8WUD4 166 aaPredicted RBP16.3■□□□□ 0.2
DDX41-208ENST00000507955 CCSER1Q9C0I3 900 aa16.3■□□□□ 0.2
DDX41-208ENST00000507955 ERCC3P19447 782 aa16.3■□□□□ 0.2
DDX41-208ENST00000507955 ALDH1B1P30837 517 aa16.3■□□□□ 0.2
DDX41-208ENST00000507955 GNG11P61952 73 aa16.3■□□□□ 0.2
DDX41-208ENST00000507955 GABPB1Q06547 395 aaPredicted RBP16.3■□□□□ 0.2
DDX41-208ENST00000507955 ARHGAP29Q52LW3 1261 aa16.3■□□□□ 0.2
DDX41-208ENST00000507955 ZSCAN29Q8IWY8 852 aaPredicted RBP16.3■□□□□ 0.2
DDX41-208ENST00000507955 SRRTQ9BXP5 876 aaKnown RBP16.3■□□□□ 0.2
DDX41-208ENST00000507955 ZNF543Q08ER8 600 aa16.29■□□□□ 0.2
DDX41-208ENST00000507955 FILIP1LQ4L180 1135 aa16.29■□□□□ 0.2
DDX41-208ENST00000507955 MASTLQ96GX5 879 aa16.29■□□□□ 0.2
DDX41-208ENST00000507955 EPC1Q9H2F5 836 aa16.29■□□□□ 0.2
DDX41-208ENST00000507955 LRRC37AA6NMS7 1700 aa16.29■□□□□ 0.2
DDX41-208ENST00000507955 RMND1Q9NWS8 449 aa16.29■□□□□ 0.2
DDX41-208ENST00000507955 ZSCAN12O43309 604 aa16.28■□□□□ 0.2
DDX41-208ENST00000507955 MFAP3LO75121 409 aa16.28■□□□□ 0.2
DDX41-208ENST00000507955 SNHG28P0DPA3 235 aa16.28■□□□□ 0.2
DDX41-208ENST00000507955 PDE6BP35913 854 aa16.28■□□□□ 0.2
DDX41-208ENST00000507955 ADCY7P51828 1080 aa16.28■□□□□ 0.2
DDX41-208ENST00000507955 ASIC1P78348 528 aa16.28■□□□□ 0.2
DDX41-208ENST00000507955 UBXN1Q04323 297 aa16.28■□□□□ 0.2
DDX41-208ENST00000507955 PDE4DQ08499 809 aa16.28■□□□□ 0.2
DDX41-208ENST00000507955 SH3BP5LQ7L8J4 393 aa16.28■□□□□ 0.2
DDX41-208ENST00000507955 DYMQ7RTS9 669 aa16.28■□□□□ 0.2
DDX41-208ENST00000507955 C2CD5Q86YS7 1000 aa16.28■□□□□ 0.2
DDX41-208ENST00000507955 CTAGE1Q96RT6 745 aa16.28■□□□□ 0.2
DDX41-208ENST00000507955 TRIM9Q9C026 710 aa16.28■□□□□ 0.2
DDX41-208ENST00000507955 LIMA1Q9UHB6 759 aaKnown RBP16.28■□□□□ 0.2
DDX41-208ENST00000507955 USP17L15C9J2P7 530 aa16.28■□□□□ 0.2
DDX41-208ENST00000507955 USP17L13C9JLJ4 530 aa16.28■□□□□ 0.2
DDX41-208ENST00000507955 USP17L11C9JVI0 530 aa16.28■□□□□ 0.2
DDX41-208ENST00000507955 USP17L18D6R9N7 530 aa16.28■□□□□ 0.2
DDX41-208ENST00000507955 USP17L22D6RA61 530 aa16.28■□□□□ 0.2
DDX41-208ENST00000507955 USP17L17D6RBQ6 530 aa16.28■□□□□ 0.2
DDX41-208ENST00000507955 USP17L19D6RCP7 530 aa16.28■□□□□ 0.2
DDX41-208ENST00000507955 USP17L20D6RJB6 530 aa16.28■□□□□ 0.2
DDX41-208ENST00000507955 GDF11O95390 407 aa16.28■□□□□ 0.2
DDX41-208ENST00000507955 PRPHP41219 470 aa16.28■□□□□ 0.2
DDX41-208ENST00000507955 NT5C2P49902 561 aa16.28■□□□□ 0.2
DDX41-208ENST00000507955 USP17L24Q0WX57 530 aa16.28■□□□□ 0.2
DDX41-208ENST00000507955 CALCRLQ16602 461 aa16.28■□□□□ 0.2
DDX41-208ENST00000507955 USP17L6PQ6QN14 398 aa16.28■□□□□ 0.2
DDX41-208ENST00000507955 TMC4Q7Z404 712 aa16.28■□□□□ 0.2
DDX41-208ENST00000507955 ACRBPQ8NEB7 543 aa16.28■□□□□ 0.2
DDX41-208ENST00000507955 TRIM47Q96LD4 638 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms