RNA–Protein interactions for RNA: ENST00000507376.1

COPS4-205, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 5

Gene COPS4, Length 438 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-205ENST00000507376 TCRBV5S4A2TA0A5A2 114 aa10.79□□□□□ -0.68
COPS4-205ENST00000507376 ERC2O15083 957 aa10.79□□□□□ -0.68
COPS4-205ENST00000507376 TLL1O43897 1013 aa10.79□□□□□ -0.68
COPS4-205ENST00000507376 DUSP11O75319 330 aaKnown RBP10.79□□□□□ -0.68
COPS4-205ENST00000507376 SLC25A27O95847 323 aa10.79□□□□□ -0.68
COPS4-205ENST00000507376 CNTN2Q02246 1040 aa10.79□□□□□ -0.68
COPS4-205ENST00000507376 ARMCX2Q7L311 632 aa10.79□□□□□ -0.68
COPS4-205ENST00000507376 SSH3Q8TE77 659 aa10.79□□□□□ -0.68
COPS4-205ENST00000507376 FRAT1Q92837 279 aaPredicted RBP10.79□□□□□ -0.68
COPS4-205ENST00000507376 BCL11AQ9H165 835 aa10.79□□□□□ -0.68
COPS4-205ENST00000507376 FAM184BQ9ULE4 1060 aa10.79□□□□□ -0.68
COPS4-205ENST00000507376 EXOC6BQ9Y2D4 811 aa10.79□□□□□ -0.68
COPS4-205ENST00000507376 ATG2AQ2TAZ0 1938 aa10.79□□□□□ -0.68
COPS4-205ENST00000507376 ELP1O95163 1332 aa10.79□□□□□ -0.68
COPS4-205ENST00000507376 LCHNA4D1U4 455 aa10.78□□□□□ -0.68
COPS4-205ENST00000507376 LPXNO60711 386 aa10.78□□□□□ -0.68
COPS4-205ENST00000507376 MBD4O95243 580 aa10.78□□□□□ -0.68
COPS4-205ENST00000507376 FGBP02675 491 aa10.78□□□□□ -0.68
COPS4-205ENST00000507376 CYP2C9P11712 490 aa10.78□□□□□ -0.68
COPS4-205ENST00000507376 GJA9P57773 515 aa10.78□□□□□ -0.68
COPS4-205ENST00000507376 ACVR2BQ13705 512 aa10.78□□□□□ -0.68
COPS4-205ENST00000507376 GNASQ5JWF2 1037 aa10.78□□□□□ -0.68
COPS4-205ENST00000507376 SMYD5Q6GMV2 418 aa10.78□□□□□ -0.68
COPS4-205ENST00000507376 DEFB128Q7Z7B8 93 aa10.78□□□□□ -0.68
COPS4-205ENST00000507376 CPXCR1Q8N123 301 aa10.78□□□□□ -0.68
COPS4-205ENST00000507376 GDPD5Q8WTR4 605 aa10.78□□□□□ -0.68
COPS4-205ENST00000507376 ARNTL2Q8WYA1 636 aa10.78□□□□□ -0.68
COPS4-205ENST00000507376 AGBL1Q96MI9 1066 aa10.78□□□□□ -0.68
COPS4-205ENST00000507376 PURBQ96QR8 312 aaKnown RBP10.78□□□□□ -0.68
COPS4-205ENST00000507376 ARHGEF10LQ9HCE6 1279 aa10.78□□□□□ -0.68
COPS4-205ENST00000507376 RAVER2Q9HCJ3 691 aaKnown RBP10.78□□□□□ -0.68
COPS4-205ENST00000507376 IL1RAPL2Q9NP60 686 aa10.78□□□□□ -0.68
COPS4-205ENST00000507376 PDGFCQ9NRA1 345 aa10.78□□□□□ -0.68
COPS4-205ENST00000507376 HOMER2Q9NSB8 354 aa10.78□□□□□ -0.68
COPS4-205ENST00000507376 DIS3Q9Y2L1 958 aaKnown RBP10.78□□□□□ -0.68
COPS4-205ENST00000507376 WDFY4Q6ZS81 3184 aa10.78□□□□□ -0.68
COPS4-205ENST00000507376 ZNF318Q5VUA4 2279 aa10.78□□□□□ -0.68
COPS4-205ENST00000507376 RLBP1P12271 317 aa10.77□□□□□ -0.69
COPS4-205ENST00000507376 ATP2A2P16615 1042 aaKnown RBP10.77□□□□□ -0.69
COPS4-205ENST00000507376 CDK8P49336 464 aa10.77□□□□□ -0.69
COPS4-205ENST00000507376 SLC9C2Q5TAH2 1124 aa10.77□□□□□ -0.69
COPS4-205ENST00000507376 MAMDC4Q6UXC1 1216 aa10.77□□□□□ -0.69
COPS4-205ENST00000507376 AACSQ86V21 672 aa10.77□□□□□ -0.69
COPS4-205ENST00000507376 CCDC144CPQ8IYA2 1237 aa10.77□□□□□ -0.69
COPS4-205ENST00000507376 SLC43A3Q8NBI5 491 aa10.77□□□□□ -0.69
COPS4-205ENST00000507376 DNAJC2Q99543 621 aaKnown RBP10.77□□□□□ -0.69
COPS4-205ENST00000507376 CRNKL1Q9BZJ0 848 aaKnown RBP10.77□□□□□ -0.69
COPS4-205ENST00000507376 TRMT13Q9NUP7 481 aaKnown RBP10.77□□□□□ -0.69
COPS4-205ENST00000507376 SLC4A7Q9Y6M7 1214 aa10.77□□□□□ -0.69
COPS4-205ENST00000507376 MROH7Q68CQ1 1323 aa10.77□□□□□ -0.69
COPS4-205ENST00000507376 GOLIM4O00461 696 aa10.76□□□□□ -0.69
COPS4-205ENST00000507376 NDUFB10O96000 172 aa10.76□□□□□ -0.69
COPS4-205ENST00000507376 TAP1Q03518 808 aa10.76□□□□□ -0.69
COPS4-205ENST00000507376 GRB10Q13322 594 aa10.76□□□□□ -0.69
COPS4-205ENST00000507376 TCTN1Q2MV58 587 aa10.76□□□□□ -0.69
COPS4-205ENST00000507376 EEPD1Q7L9B9 569 aa10.76□□□□□ -0.69
COPS4-205ENST00000507376 TLK2Q86UE8 772 aa10.76□□□□□ -0.69
COPS4-205ENST00000507376 FBXO16Q8IX29 292 aaPredicted RBP10.76□□□□□ -0.69
COPS4-205ENST00000507376 PHOX2BQ99453 314 aa10.76□□□□□ -0.69
COPS4-205ENST00000507376 SLF1Q9BQI6 1058 aa10.76□□□□□ -0.69
COPS4-205ENST00000507376 TEX13BQ9BXU2 312 aa10.76□□□□□ -0.69
COPS4-205ENST00000507376 PCDHA11Q9Y5I1 949 aa10.76□□□□□ -0.69
COPS4-205ENST00000507376 SIP14410 1827 aa10.75□□□□□ -0.69
COPS4-205ENST00000507376 SOWAHBA6NEL2 793 aa10.75□□□□□ -0.69
COPS4-205ENST00000507376 USP17L12C9JPN9 530 aa10.75□□□□□ -0.69
COPS4-205ENST00000507376 USP17L21D6R901 530 aa10.75□□□□□ -0.69
COPS4-205ENST00000507376 TLR3O15455 904 aaKnown RBP10.75□□□□□ -0.69
COPS4-205ENST00000507376 ZMYND10O75800 440 aa10.75□□□□□ -0.69
COPS4-205ENST00000507376 SMPD1P17405 629 aa10.75□□□□□ -0.69
COPS4-205ENST00000507376 SNAP25P60880 206 aa10.75□□□□□ -0.69
COPS4-205ENST00000507376 ATP8B2P98198 1209 aa10.75□□□□□ -0.69
COPS4-205ENST00000507376 ITGA7Q13683 1181 aa10.75□□□□□ -0.69
COPS4-205ENST00000507376 C16orf86Q6ZW13 317 aa10.75□□□□□ -0.69
COPS4-205ENST00000507376 PCSK9Q8NBP7 692 aaKnown RBP10.75□□□□□ -0.69
COPS4-205ENST00000507376 DDX11Q96FC9 970 aa10.75□□□□□ -0.69
COPS4-205ENST00000507376 MTUS1Q9ULD2 1270 aa10.75□□□□□ -0.69
COPS4-205ENST00000507376 HDAC5Q9UQL6 1122 aa10.75□□□□□ -0.69
COPS4-205ENST00000507376 GNEQ9Y223 722 aaKnown RBP10.75□□□□□ -0.69
COPS4-205ENST00000507376 TRIP12Q14669 1992 aaPredicted RBP10.75□□□□□ -0.69
COPS4-205ENST00000507376 SCN10AQ9Y5Y9 1956 aa10.75□□□□□ -0.69
COPS4-205ENST00000507376 IL9P15248 144 aa10.74□□□□□ -0.69
COPS4-205ENST00000507376 MRE11P49959 708 aa10.74□□□□□ -0.69
COPS4-205ENST00000507376 FSCN1Q16658 493 aaKnown RBP10.74□□□□□ -0.69
COPS4-205ENST00000507376 C12orf60Q5U649 245 aa10.74□□□□□ -0.69
COPS4-205ENST00000507376 CCDC174Q6PII3 467 aa10.74□□□□□ -0.69
COPS4-205ENST00000507376 NOL8Q76FK4 1167 aaKnown RBP10.74□□□□□ -0.69
COPS4-205ENST00000507376 LRRC47Q8N1G4 583 aaKnown RBP10.74□□□□□ -0.69
COPS4-205ENST00000507376 KIFC2Q96AC6 838 aa10.74□□□□□ -0.69
COPS4-205ENST00000507376 NOP58Q9Y2X3 529 aaKnown RBP10.74□□□□□ -0.69
COPS4-205ENST00000507376 GPR37L1O60883 481 aa10.73□□□□□ -0.69
COPS4-205ENST00000507376 RASA1P20936 1047 aa10.73□□□□□ -0.69
COPS4-205ENST00000507376 ARHGAP45Q92619 1136 aa10.73□□□□□ -0.69
COPS4-205ENST00000507376 ALDH8A1Q9H2A2 487 aaPredicted RBP10.73□□□□□ -0.69
COPS4-205ENST00000507376 ABHD16BQ9H3Z7 469 aa10.73□□□□□ -0.69
COPS4-205ENST00000507376 SH2D4AQ9H788 454 aa10.73□□□□□ -0.69
COPS4-205ENST00000507376 A1CFQ9NQ94 594 aaKnown RBP10.73□□□□□ -0.69
COPS4-205ENST00000507376 SWAP70Q9UH65 585 aa10.73□□□□□ -0.69
COPS4-205ENST00000507376 ZBED9Q6R2W3 1325 aa10.73□□□□□ -0.69
COPS4-205ENST00000507376 DYNC1LI2O43237 492 aaPredicted RBP10.72□□□□□ -0.69
COPS4-205ENST00000507376 PRDM1O75626 825 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms