RNA–Protein interactions for RNA: ENST00000506436.1

LARS-208, Transcript of leucyl-tRNA synthetase, human

TSL 3

Gene LARS, Length 539 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LARS-208	ENST00000506436	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	13.22	□□□□□ -0.29
LARS-208	ENST00000506436	LINC01553	A4QN01	128 aa		13.21	□□□□□ -0.29
LARS-208	ENST00000506436	TMEM221	A6NGB7	291 aa		13.21	□□□□□ -0.29
LARS-208	ENST00000506436	ASB14	A6NK59	587 aa		13.21	□□□□□ -0.29
LARS-208	ENST00000506436		M0R296	226 aa		13.21	□□□□□ -0.29
LARS-208	ENST00000506436	EFCAB14	O75071	495 aa		13.21	□□□□□ -0.29
LARS-208	ENST00000506436	PARN	O95453	639 aa	Known RBP	13.21	□□□□□ -0.29
LARS-208	ENST00000506436	WDR5	P61964	334 aa	Known RBP	13.21	□□□□□ -0.29
LARS-208	ENST00000506436	PSMC6	P62333	389 aa		13.21	□□□□□ -0.29
LARS-208	ENST00000506436	SMAD2	Q15796	467 aa	Known RBP	13.21	□□□□□ -0.29
LARS-208	ENST00000506436	IQSEC1	Q6DN90	963 aa		13.21	□□□□□ -0.29
LARS-208	ENST00000506436	FBXL6	Q8N531	539 aa		13.21	□□□□□ -0.29
LARS-208	ENST00000506436	ATOH1	Q92858	354 aa	Predicted RBP	13.21	□□□□□ -0.29
LARS-208	ENST00000506436	FGD4	Q96M96	766 aa		13.21	□□□□□ -0.29
LARS-208	ENST00000506436	SLF1	Q9BQI6	1058 aa		13.21	□□□□□ -0.29
LARS-208	ENST00000506436	MTUS1	Q9ULD2	1270 aa		13.21	□□□□□ -0.29
LARS-208	ENST00000506436	SALL2	Q9Y467	1007 aa	Predicted RBP	13.21	□□□□□ -0.29
LARS-208	ENST00000506436	CACNA1G	O43497	2377 aa		13.21	□□□□□ -0.3
LARS-208	ENST00000506436	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	13.2	□□□□□ -0.3
LARS-208	ENST00000506436	DYNC1LI2	O43237	492 aa	Predicted RBP	13.2	□□□□□ -0.3
LARS-208	ENST00000506436	IDH1	O75874	414 aa	Known RBP	13.2	□□□□□ -0.3
LARS-208	ENST00000506436	ID4	P47928	161 aa		13.2	□□□□□ -0.3
LARS-208	ENST00000506436	G3BP1	Q13283	466 aa	Known RBP eCLIP	13.2	□□□□□ -0.3
LARS-208	ENST00000506436	RNF135	Q8IUD6	432 aa		13.2	□□□□□ -0.3
LARS-208	ENST00000506436	PRPF38A	Q8NAV1	312 aa	Known RBP	13.2	□□□□□ -0.3
LARS-208	ENST00000506436	FBXO22	Q8NEZ5	403 aa		13.2	□□□□□ -0.3
LARS-208	ENST00000506436	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	13.2	□□□□□ -0.3
LARS-208	ENST00000506436	SSH1	Q8WYL5	1049 aa		13.2	□□□□□ -0.3
LARS-208	ENST00000506436	SAMD11	Q96NU1	681 aa		13.2	□□□□□ -0.3
LARS-208	ENST00000506436	KANSL2	Q9H9L4	492 aa		13.2	□□□□□ -0.3
LARS-208	ENST00000506436	PIH1D3	Q9NQM4	214 aa	Known RBP	13.2	□□□□□ -0.3
LARS-208	ENST00000506436	MCM9	Q9NXL9	1143 aa		13.2	□□□□□ -0.3
LARS-208	ENST00000506436	RIPK3	Q9Y572	518 aa		13.2	□□□□□ -0.3
LARS-208	ENST00000506436	SI	P14410	1827 aa		13.2	□□□□□ -0.3
LARS-208	ENST00000506436	SCN5A	Q14524	2016 aa		13.2	□□□□□ -0.3
LARS-208	ENST00000506436	ZBED4	O75132	1171 aa		13.19	□□□□□ -0.3
LARS-208	ENST00000506436	ZAP70	P43403	619 aa		13.19	□□□□□ -0.3
LARS-208	ENST00000506436	PTPN11	Q06124	597 aa	Predicted RBP	13.19	□□□□□ -0.3
LARS-208	ENST00000506436	CCDC155	Q8N6L0	562 aa		13.19	□□□□□ -0.3
LARS-208	ENST00000506436	BANK1	Q8NDB2	785 aa		13.19	□□□□□ -0.3
LARS-208	ENST00000506436	CRBN	Q96SW2	442 aa		13.19	□□□□□ -0.3
LARS-208	ENST00000506436	RIOK1	Q9BRS2	568 aa	Known RBP	13.19	□□□□□ -0.3
LARS-208	ENST00000506436	CRNKL1	Q9BZJ0	848 aa	Known RBP	13.19	□□□□□ -0.3
LARS-208	ENST00000506436	CTDP1	Q9Y5B0	961 aa	Predicted RBP	13.19	□□□□□ -0.3
LARS-208	ENST00000506436	MCM3AP	O60318	1980 aa		13.19	□□□□□ -0.3
LARS-208	ENST00000506436	TANC1	Q9C0D5	1861 aa		13.19	□□□□□ -0.3
LARS-208	ENST00000506436	DNAH14	Q0VDD8	3507 aa		13.18	□□□□□ -0.3
LARS-208	ENST00000506436	ABHD14A-ACY1	A0A1B0GW23	586 aa		13.18	□□□□□ -0.3
LARS-208	ENST00000506436	USP17L12	C9JPN9	530 aa		13.18	□□□□□ -0.3
LARS-208	ENST00000506436	USP17L21	D6R901	530 aa		13.18	□□□□□ -0.3
LARS-208	ENST00000506436	GNAI3	P08754	354 aa		13.18	□□□□□ -0.3
LARS-208	ENST00000506436	SMPD1	P17405	629 aa		13.18	□□□□□ -0.3
LARS-208	ENST00000506436	CPT1A	P50416	773 aa		13.18	□□□□□ -0.3
LARS-208	ENST00000506436	OAZ1	P54368	228 aa		13.18	□□□□□ -0.3
LARS-208	ENST00000506436	NBPF20	Q3BBV1	942 aa		13.18	□□□□□ -0.3
LARS-208	ENST00000506436	ALDH1L2	Q3SY69	923 aa		13.18	□□□□□ -0.3
LARS-208	ENST00000506436	FAM83B	Q5T0W9	1011 aa		13.18	□□□□□ -0.3
LARS-208	ENST00000506436	NFRKB	Q6P4R8	1299 aa		13.18	□□□□□ -0.3
LARS-208	ENST00000506436	CNKSR3	Q6P9H4	555 aa		13.18	□□□□□ -0.3
LARS-208	ENST00000506436	CAGE1	Q8TC20	777 aa		13.18	□□□□□ -0.3
LARS-208	ENST00000506436	AFAP1L1	Q8TED9	768 aa		13.18	□□□□□ -0.3
LARS-208	ENST00000506436	FAM86C1	Q9NVL1	165 aa		13.18	□□□□□ -0.3
LARS-208	ENST00000506436	INSL6	Q9Y581	213 aa		13.18	□□□□□ -0.3
LARS-208	ENST00000506436	RGS20	O76081	388 aa		13.17	□□□□□ -0.3
LARS-208	ENST00000506436	EEF2	P13639	858 aa	Known RBP	13.17	□□□□□ -0.3
LARS-208	ENST00000506436	AKR1B1	P15121	316 aa		13.17	□□□□□ -0.3
LARS-208	ENST00000506436	PURA	Q00577	322 aa	Known RBP	13.17	□□□□□ -0.3
LARS-208	ENST00000506436	FAM133A	Q8N9E0	248 aa		13.17	□□□□□ -0.3
LARS-208	ENST00000506436	MTG1	Q9BT17	334 aa	Predicted RBP	13.17	□□□□□ -0.3
LARS-208	ENST00000506436	NSUN3	Q9H649	340 aa	Known RBP	13.17	□□□□□ -0.3
LARS-208	ENST00000506436	ALG13	Q9NP73	1137 aa	Known RBP	13.17	□□□□□ -0.3
LARS-208	ENST00000506436	GPHN	Q9NQX3	736 aa	Predicted RBP	13.17	□□□□□ -0.3
LARS-208	ENST00000506436	KMT2B	Q9UMN6	2715 aa	Predicted RBP	13.17	□□□□□ -0.3
LARS-208	ENST00000506436	TET1	Q8NFU7	2136 aa		13.16	□□□□□ -0.3
LARS-208	ENST00000506436	TPR	P12270	2363 aa	Known RBP	13.16	□□□□□ -0.3
LARS-208	ENST00000506436	ZFHX4	Q86UP3	3567 aa		13.16	□□□□□ -0.3
LARS-208	ENST00000506436	MAGEB6P1	A0A0J9YX57	407 aa		13.16	□□□□□ -0.3
LARS-208	ENST00000506436	FDX1	P10109	184 aa		13.16	□□□□□ -0.3
LARS-208	ENST00000506436	BRDT	Q58F21	947 aa	Predicted RBP	13.16	□□□□□ -0.3
LARS-208	ENST00000506436	TNNI3K	Q59H18	835 aa		13.16	□□□□□ -0.3
LARS-208	ENST00000506436	CLEC10A	Q8IUN9	316 aa		13.16	□□□□□ -0.3
LARS-208	ENST00000506436	MEIS3	Q99687	375 aa		13.16	□□□□□ -0.3
LARS-208	ENST00000506436	DBNDD2	Q9BQY9	259 aa		13.16	□□□□□ -0.3
LARS-208	ENST00000506436	VTA1	Q9NP79	307 aa		13.16	□□□□□ -0.3
LARS-208	ENST00000506436	TRPC6	Q9Y210	931 aa		13.16	□□□□□ -0.3
LARS-208	ENST00000506436	NOD1	Q9Y239	953 aa		13.16	□□□□□ -0.3
LARS-208	ENST00000506436	FPGT-TNNI3K	V9GXZ4	949 aa		13.16	□□□□□ -0.3
LARS-208	ENST00000506436	VPS13A	Q96RL7	3174 aa		13.16	□□□□□ -0.3
LARS-208	ENST00000506436	NAV1	Q8NEY1	1877 aa		13.15	□□□□□ -0.3
LARS-208	ENST00000506436	MYO5A	Q9Y4I1	1855 aa	Known RBP	13.15	□□□□□ -0.3
LARS-208	ENST00000506436	PRR23A	A6NEV1	266 aa		13.15	□□□□□ -0.3
LARS-208	ENST00000506436		H3BNC9	293 aa		13.15	□□□□□ -0.3
LARS-208	ENST00000506436	KPNA6	O60684	536 aa		13.15	□□□□□ -0.3
LARS-208	ENST00000506436	DEFB103A	P81534	67 aa		13.15	□□□□□ -0.3
LARS-208	ENST00000506436	ZXDA	P98168	799 aa		13.15	□□□□□ -0.3
LARS-208	ENST00000506436	SMAD4	Q13485	552 aa	Known RBP	13.15	□□□□□ -0.3
LARS-208	ENST00000506436	DUSP28	Q4G0W2	176 aa		13.15	□□□□□ -0.3
LARS-208	ENST00000506436	FAM47C	Q5HY64	1035 aa		13.15	□□□□□ -0.3
LARS-208	ENST00000506436	EP400NL	Q6ZTU2	488 aa		13.15	□□□□□ -0.3
LARS-208	ENST00000506436	CPXCR1	Q8N123	301 aa		13.15	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms