RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 HS3ST3A1Q9Y663 406 aa1.69□□□□□ -2.14
XRN1-214ENST00000498077 MED12Q93074 2177 aa1.69□□□□□ -2.14
XRN1-214ENST00000498077 TRPM1Q7Z4N2 1603 aa1.69□□□□□ -2.14
XRN1-214ENST00000498077 ICE1Q9Y2F5 2266 aa1.68□□□□□ -2.14
XRN1-214ENST00000498077 GOLGA6L4A6NEF3 574 aa1.68□□□□□ -2.14
XRN1-214ENST00000498077 C19orf81C9J6K1 198 aa1.68□□□□□ -2.14
XRN1-214ENST00000498077 B4GAT1O43505 415 aa1.68□□□□□ -2.14
XRN1-214ENST00000498077 FBXO24O75426 580 aa1.68□□□□□ -2.14
XRN1-214ENST00000498077 CBR3O75828 277 aa1.68□□□□□ -2.14
XRN1-214ENST00000498077 CCDC166P0CW27 439 aa1.68□□□□□ -2.14
XRN1-214ENST00000498077 BMP4P12644 408 aa1.68□□□□□ -2.14
XRN1-214ENST00000498077 GRIK1P39086 918 aa1.68□□□□□ -2.14
XRN1-214ENST00000498077 SLCO1A2P46721 670 aa1.68□□□□□ -2.14
XRN1-214ENST00000498077 ZBED6P86452 979 aa1.68□□□□□ -2.14
XRN1-214ENST00000498077 FKBP5Q13451 457 aaPredicted RBP1.68□□□□□ -2.14
XRN1-214ENST00000498077 ITGA9Q13797 1035 aa1.68□□□□□ -2.14
XRN1-214ENST00000498077 RUNX2Q13950 521 aa1.68□□□□□ -2.14
XRN1-214ENST00000498077 ELOAQ14241 798 aaKnown RBP1.68□□□□□ -2.14
XRN1-214ENST00000498077 DHX8Q14562 1220 aaKnown RBP1.68□□□□□ -2.14
XRN1-214ENST00000498077 ENOX2Q16206 610 aaKnown RBP1.68□□□□□ -2.14
XRN1-214ENST00000498077 AOC3Q16853 763 aa1.68□□□□□ -2.14
XRN1-214ENST00000498077 MCTP2Q6DN12 878 aa1.68□□□□□ -2.14
XRN1-214ENST00000498077 ARMC6Q6NXE6 501 aa1.68□□□□□ -2.14
XRN1-214ENST00000498077 Q71RC1 249 aaPredicted RBP1.68□□□□□ -2.14
XRN1-214ENST00000498077 RHOT1Q8IXI2 618 aa1.68□□□□□ -2.14
XRN1-214ENST00000498077 KLHL23Q8NBE8 558 aa1.68□□□□□ -2.14
XRN1-214ENST00000498077 RIN3Q8TB24 985 aa1.68□□□□□ -2.14
XRN1-214ENST00000498077 TRIM44Q96DX7 344 aaPredicted RBP1.68□□□□□ -2.14
XRN1-214ENST00000498077 CEP89Q96ST8 783 aa1.68□□□□□ -2.14
XRN1-214ENST00000498077 ADAM2Q99965 735 aa1.68□□□□□ -2.14
XRN1-214ENST00000498077 PIDD1Q9HB75 910 aa1.68□□□□□ -2.14
XRN1-214ENST00000498077 SRA1Q9HD15 236 aaKnown RBP1.68□□□□□ -2.14
XRN1-214ENST00000498077 BSDC1Q9NW68 430 aaPredicted RBP1.68□□□□□ -2.14
XRN1-214ENST00000498077 DYRK1BQ9Y463 629 aa1.68□□□□□ -2.14
XRN1-214ENST00000498077 ZNF462Q96JM2 2506 aa1.68□□□□□ -2.14
XRN1-214ENST00000498077 SHTN1A0MZ66 631 aa1.68□□□□□ -2.14
XRN1-214ENST00000498077 SMCO2A6NFE2 343 aa1.68□□□□□ -2.14
XRN1-214ENST00000498077 PODXLO00592 558 aa1.68□□□□□ -2.14
XRN1-214ENST00000498077 NPHP1O15259 732 aa1.68□□□□□ -2.14
XRN1-214ENST00000498077 LILRB3O75022 631 aa1.68□□□□□ -2.14
XRN1-214ENST00000498077 GNA14O95837 355 aa1.68□□□□□ -2.14
XRN1-214ENST00000498077 ATP1A1P05023 1023 aaKnown RBP1.68□□□□□ -2.14
XRN1-214ENST00000498077 IFITM1P13164 125 aa1.68□□□□□ -2.14
XRN1-214ENST00000498077 EIF2AK2P19525 551 aaKnown RBP1.68□□□□□ -2.14
XRN1-214ENST00000498077 FSHRP23945 695 aa1.68□□□□□ -2.14
XRN1-214ENST00000498077 RBL1P28749 1068 aa1.68□□□□□ -2.14
XRN1-214ENST00000498077 MRPS5P82675 430 aaKnown RBP1.68□□□□□ -2.14
XRN1-214ENST00000498077 PITPNAQ00169 270 aa1.68□□□□□ -2.14
XRN1-214ENST00000498077 ACTN3Q08043 901 aaPredicted RBP1.68□□□□□ -2.14
XRN1-214ENST00000498077 CCDC96Q2M329 555 aa1.68□□□□□ -2.14
XRN1-214ENST00000498077 TCERG1LQ5VWI1 586 aa1.68□□□□□ -2.14
XRN1-214ENST00000498077 KCNIP4Q6PIL6 250 aa1.68□□□□□ -2.14
XRN1-214ENST00000498077 LUZP1Q86V48 1076 aa1.68□□□□□ -2.14
XRN1-214ENST00000498077 VWA5B2Q8N398 1253 aa1.68□□□□□ -2.14
XRN1-214ENST00000498077 NFATC2IPQ8NCF5 419 aa1.68□□□□□ -2.14
XRN1-214ENST00000498077 PHF21AQ96BD5 680 aa1.68□□□□□ -2.14
XRN1-214ENST00000498077 KIF1BPQ96EK5 621 aa1.68□□□□□ -2.14
XRN1-214ENST00000498077 PELI1Q96FA3 418 aa1.68□□□□□ -2.14
XRN1-214ENST00000498077 LOXL4Q96JB6 756 aa1.68□□□□□ -2.14
XRN1-214ENST00000498077 NSUN5Q96P11 429 aaKnown RBP1.68□□□□□ -2.14
XRN1-214ENST00000498077 RTP3Q9BQQ7 232 aa1.68□□□□□ -2.14
XRN1-214ENST00000498077 ZNF518BQ9C0D4 1074 aa1.68□□□□□ -2.14
XRN1-214ENST00000498077 UNC45AQ9H3U1 944 aa1.68□□□□□ -2.14
XRN1-214ENST00000498077 CALHM2Q9HA72 323 aa1.68□□□□□ -2.14
XRN1-214ENST00000498077 TFIP11Q9UBB9 837 aaKnown RBP1.68□□□□□ -2.14
XRN1-214ENST00000498077 FBXL21Q9UKT6 434 aa1.68□□□□□ -2.14
XRN1-214ENST00000498077 NAV3Q8IVL0 2385 aa1.68□□□□□ -2.14
XRN1-214ENST00000498077 INSRP06213 1382 aa1.68□□□□□ -2.14
XRN1-214ENST00000498077 A0A1B0GTH6 734 aa1.68□□□□□ -2.14
XRN1-214ENST00000498077 MOXD2PA6NHM9 499 aa1.68□□□□□ -2.14
XRN1-214ENST00000498077 NUDT19A8MXV4 375 aa1.68□□□□□ -2.14
XRN1-214ENST00000498077 TRAF5O00463 557 aa1.68□□□□□ -2.14
XRN1-214ENST00000498077 LRRTM2O43300 516 aa1.68□□□□□ -2.14
XRN1-214ENST00000498077 CTNND1O60716 968 aaKnown RBP1.68□□□□□ -2.14
XRN1-214ENST00000498077 ZBTB7AO95365 584 aa1.68□□□□□ -2.14
XRN1-214ENST00000498077 LDOC1O95751 146 aaPredicted RBP1.68□□□□□ -2.14
XRN1-214ENST00000498077 CBX7O95931 251 aa1.68□□□□□ -2.14
XRN1-214ENST00000498077 FGAP02671 866 aa1.68□□□□□ -2.14
XRN1-214ENST00000498077 TSPY4P0CV99 314 aa1.68□□□□□ -2.14
XRN1-214ENST00000498077 TSPY10P0CW01 314 aa1.68□□□□□ -2.14
XRN1-214ENST00000498077 PEPDP12955 493 aa1.68□□□□□ -2.14
XRN1-214ENST00000498077 MMP8P22894 467 aa1.68□□□□□ -2.14
XRN1-214ENST00000498077 RPL10P27635 214 aaKnown RBP1.68□□□□□ -2.14
XRN1-214ENST00000498077 RBBP5Q15291 538 aaKnown RBP1.68□□□□□ -2.14
XRN1-214ENST00000498077 SKAP1Q86WV1 359 aa1.68□□□□□ -2.14
XRN1-214ENST00000498077 MAP4K3Q8IVH8 894 aa1.68□□□□□ -2.14
XRN1-214ENST00000498077 MRAPQ8TCY5 172 aa1.68□□□□□ -2.14
XRN1-214ENST00000498077 UBE2E3Q969T4 207 aa1.68□□□□□ -2.14
XRN1-214ENST00000498077 PMEPA1Q969W9 287 aa1.68□□□□□ -2.14
XRN1-214ENST00000498077 DACT3Q96B18 629 aaPredicted RBP1.68□□□□□ -2.14
XRN1-214ENST00000498077 BICD1Q96G01 975 aa1.68□□□□□ -2.14
XRN1-214ENST00000498077 BORCS6Q96GS4 357 aa1.68□□□□□ -2.14
XRN1-214ENST00000498077 MFSD14AQ96MC6 490 aa1.68□□□□□ -2.14
XRN1-214ENST00000498077 ZNF641Q96N77 438 aaPredicted RBP1.68□□□□□ -2.14
XRN1-214ENST00000498077 CNTNAP3BQ96NU0 1288 aa1.68□□□□□ -2.14
XRN1-214ENST00000498077 RBM4Q9BWF3 364 aaKnown RBP1.68□□□□□ -2.14
XRN1-214ENST00000498077 NIFKQ9BYG3 293 aaKnown RBP1.68□□□□□ -2.14
XRN1-214ENST00000498077 CNTNAP3Q9BZ76 1288 aa1.68□□□□□ -2.14
XRN1-214ENST00000498077 SPHK2Q9NRA0 654 aa1.68□□□□□ -2.14
XRN1-214ENST00000498077 SAMSN1Q9NSI8 373 aaKnown RBP1.68□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 130 ms