RNA–Protein interactions for RNA: ENST00000492455.1

HMGB1P30-201, Transcript of high mobility group box 1 pseudogene 30, humanhuman

BASIC

Gene HMGB1P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P30-201ENST00000492455 TCTN2Q96GX1 697 aa4.65□□□□□ -1.67
HMGB1P30-201ENST00000492455 LOXL4Q96JB6 756 aa4.65□□□□□ -1.67
HMGB1P30-201ENST00000492455 SEC16BQ96JE7 1060 aa4.65□□□□□ -1.67
HMGB1P30-201ENST00000492455 FCRL2Q96LA5 508 aaPredicted RBP4.65□□□□□ -1.67
HMGB1P30-201ENST00000492455 HDAC8Q9BY41 377 aa4.65□□□□□ -1.67
HMGB1P30-201ENST00000492455 SLITRK6Q9H5Y7 841 aa4.65□□□□□ -1.67
HMGB1P30-201ENST00000492455 EHMT1Q9H9B1 1298 aa4.65□□□□□ -1.67
HMGB1P30-201ENST00000492455 ZNRF3Q9ULT6 936 aa4.65□□□□□ -1.67
HMGB1P30-201ENST00000492455 PPT2Q9UMR5 302 aa4.65□□□□□ -1.67
HMGB1P30-201ENST00000492455 PMF1-BGLAPU3KQ54 211 aa4.65□□□□□ -1.67
HMGB1P30-201ENST00000492455 A0A1W2PQ27 194 aa4.64□□□□□ -1.67
HMGB1P30-201ENST00000492455 A0A1W2PQ64 194 aa4.64□□□□□ -1.67
HMGB1P30-201ENST00000492455 A0A1W2PQC6 194 aa4.64□□□□□ -1.67
HMGB1P30-201ENST00000492455 A0A1W2PQD8 194 aa4.64□□□□□ -1.67
HMGB1P30-201ENST00000492455 CYR61O00622 381 aa4.64□□□□□ -1.67
HMGB1P30-201ENST00000492455 HTR3BO95264 441 aa4.64□□□□□ -1.67
HMGB1P30-201ENST00000492455 MSL3P1P0C860 447 aa4.64□□□□□ -1.67
HMGB1P30-201ENST00000492455 TACR2P21452 398 aa4.64□□□□□ -1.67
HMGB1P30-201ENST00000492455 GBP1P32455 592 aa4.64□□□□□ -1.67
HMGB1P30-201ENST00000492455 ARID5AQ03989 594 aa4.64□□□□□ -1.67
HMGB1P30-201ENST00000492455 COL9A2Q14055 689 aaPredicted RBP4.64□□□□□ -1.67
HMGB1P30-201ENST00000492455 CBX2Q14781 532 aaPredicted RBP4.64□□□□□ -1.67
HMGB1P30-201ENST00000492455 CWF19L2Q2TBE0 894 aaKnown RBP4.64□□□□□ -1.67
HMGB1P30-201ENST00000492455 PLEKHN1Q494U1 663 aaPredicted RBP4.64□□□□□ -1.67
HMGB1P30-201ENST00000492455 HSF5Q4G112 596 aaPredicted RBP4.64□□□□□ -1.67
HMGB1P30-201ENST00000492455 RPTNQ6XPR3 784 aa4.64□□□□□ -1.67
HMGB1P30-201ENST00000492455 CCDC81Q6ZN84 652 aa4.64□□□□□ -1.67
HMGB1P30-201ENST00000492455 TTC9BQ8N6N2 239 aa4.64□□□□□ -1.67
HMGB1P30-201ENST00000492455 CHST13Q8NET6 341 aa4.64□□□□□ -1.67
HMGB1P30-201ENST00000492455 DDX1Q92499 740 aaKnown RBP4.64□□□□□ -1.67
HMGB1P30-201ENST00000492455 SHDQ96IW2 340 aa4.64□□□□□ -1.67
HMGB1P30-201ENST00000492455 ANTXR1Q9H6X2 564 aa4.64□□□□□ -1.67
HMGB1P30-201ENST00000492455 GPR55Q9Y2T6 319 aaPredicted RBP4.64□□□□□ -1.67
HMGB1P30-201ENST00000492455 PCDHB14Q9Y5E9 798 aa4.64□□□□□ -1.67
HMGB1P30-201ENST00000492455 TMEM82A0PJX8 343 aa4.63□□□□□ -1.67
HMGB1P30-201ENST00000492455 IGFBP6P24592 240 aaPredicted RBP4.63□□□□□ -1.67
HMGB1P30-201ENST00000492455 MAPKAPK2P49137 400 aa4.63□□□□□ -1.67
HMGB1P30-201ENST00000492455 ZNF200P98182 395 aaPredicted RBP4.63□□□□□ -1.67
HMGB1P30-201ENST00000492455 GNL2Q13823 731 aaKnown RBP4.63□□□□□ -1.67
HMGB1P30-201ENST00000492455 TMEM201Q5SNT2 666 aa4.63□□□□□ -1.67
HMGB1P30-201ENST00000492455 GK5Q6ZS86 529 aa4.63□□□□□ -1.67
HMGB1P30-201ENST00000492455 FAM169BQ8N8A8 192 aa4.63□□□□□ -1.67
HMGB1P30-201ENST00000492455 SPATA32Q96LK8 384 aa4.63□□□□□ -1.67
HMGB1P30-201ENST00000492455 SAMD11Q96NU1 681 aa4.63□□□□□ -1.67
HMGB1P30-201ENST00000492455 TANGO6Q9C0B7 1094 aa4.63□□□□□ -1.67
HMGB1P30-201ENST00000492455 TNFRSF12AQ9NP84 129 aa4.63□□□□□ -1.67
HMGB1P30-201ENST00000492455 KLHL3Q9UH77 587 aa4.63□□□□□ -1.67
HMGB1P30-201ENST00000492455 A0A1W2PQ45 241 aaPredicted RBP4.62□□□□□ -1.67
HMGB1P30-201ENST00000492455 A0A1W2PQY0 241 aa4.62□□□□□ -1.67
HMGB1P30-201ENST00000492455 FADS2P1A8MWK0 482 aa4.62□□□□□ -1.67
HMGB1P30-201ENST00000492455 ZNF20P17024 532 aa4.62□□□□□ -1.67
HMGB1P30-201ENST00000492455 GIPRP48546 466 aa4.62□□□□□ -1.67
HMGB1P30-201ENST00000492455 VWA3BQ502W6 1294 aa4.62□□□□□ -1.67
HMGB1P30-201ENST00000492455 ADGRG2Q8IZP9 1017 aa4.62□□□□□ -1.67
HMGB1P30-201ENST00000492455 RBBP8NLQ8NC74 664 aaPredicted RBP4.62□□□□□ -1.67
HMGB1P30-201ENST00000492455 C8orf49Q96NF6 230 aa4.62□□□□□ -1.67
HMGB1P30-201ENST00000492455 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.62□□□□□ -1.67
HMGB1P30-201ENST00000492455 SCAND2PQ9GZW5 306 aaPredicted RBP4.62□□□□□ -1.67
HMGB1P30-201ENST00000492455 ZNF408Q9H9D4 720 aa4.62□□□□□ -1.67
HMGB1P30-201ENST00000492455 REV1Q9UBZ9 1251 aa4.62□□□□□ -1.67
HMGB1P30-201ENST00000492455 A0A1B0GTL3 188 aa4.61□□□□□ -1.67
HMGB1P30-201ENST00000492455 A0A1W2PQJ5 194 aa4.61□□□□□ -1.67
HMGB1P30-201ENST00000492455 MEIS3P2A8K0S8 358 aa4.61□□□□□ -1.67
HMGB1P30-201ENST00000492455 MCM4P33991 863 aa4.61□□□□□ -1.67
HMGB1P30-201ENST00000492455 ETFBP38117 255 aa4.61□□□□□ -1.67
HMGB1P30-201ENST00000492455 ZNF165P49910 485 aa4.61□□□□□ -1.67
HMGB1P30-201ENST00000492455 FOXO4P98177 505 aa4.61□□□□□ -1.67
HMGB1P30-201ENST00000492455 SAPCD2Q86UD0 394 aa4.61□□□□□ -1.67
HMGB1P30-201ENST00000492455 FNIP1Q8TF40 1166 aa4.61□□□□□ -1.67
HMGB1P30-201ENST00000492455 DRC1Q96MC2 740 aa4.61□□□□□ -1.67
HMGB1P30-201ENST00000492455 C1QTNF3Q9BXJ4 246 aa4.61□□□□□ -1.67
HMGB1P30-201ENST00000492455 SRRTQ9BXP5 876 aaKnown RBP4.61□□□□□ -1.67
HMGB1P30-201ENST00000492455 LNPKQ9C0E8 428 aa4.61□□□□□ -1.67
HMGB1P30-201ENST00000492455 MRVI1Q9Y6F6 885 aa4.61□□□□□ -1.67
HMGB1P30-201ENST00000492455 IRS2Q9Y4H2 1338 aa4.61□□□□□ -1.67
HMGB1P30-201ENST00000492455 SH3D21A4FU49 640 aa4.6□□□□□ -1.67
HMGB1P30-201ENST00000492455 CHURC1-FNTBB4DL54 471 aa4.6□□□□□ -1.67
HMGB1P30-201ENST00000492455 ACRP10323 421 aa4.6□□□□□ -1.67
HMGB1P30-201ENST00000492455 KIR3DS1Q14943 382 aa4.6□□□□□ -1.67
HMGB1P30-201ENST00000492455 SF3A1Q15459 793 aaKnown RBP4.6□□□□□ -1.67
HMGB1P30-201ENST00000492455 BBS9Q3SYG4 887 aa4.6□□□□□ -1.67
HMGB1P30-201ENST00000492455 CRB2Q5IJ48 1285 aa4.6□□□□□ -1.67
HMGB1P30-201ENST00000492455 OVOS1Q6IE37 1185 aa4.6□□□□□ -1.67
HMGB1P30-201ENST00000492455 ZPBP2Q6X784 338 aa4.6□□□□□ -1.67
HMGB1P30-201ENST00000492455 RUFY4Q6ZNE9 571 aa4.6□□□□□ -1.67
HMGB1P30-201ENST00000492455 VPS37DQ86XT2 251 aa4.6□□□□□ -1.67
HMGB1P30-201ENST00000492455 ZFPM1Q8IX07 1006 aa4.6□□□□□ -1.67
HMGB1P30-201ENST00000492455 DVL3Q92997 716 aaPredicted RBP4.6□□□□□ -1.67
HMGB1P30-201ENST00000492455 KISS1RQ969F8 398 aaPredicted RBP4.6□□□□□ -1.67
HMGB1P30-201ENST00000492455 CDADC1Q9BWV3 514 aa4.6□□□□□ -1.67
HMGB1P30-201ENST00000492455 ACSL6Q9UKU0 697 aa4.6□□□□□ -1.67
HMGB1P30-201ENST00000492455 STRIP2Q9ULQ0 834 aa4.6□□□□□ -1.67
HMGB1P30-201ENST00000492455 DUSP10Q9Y6W6 482 aa4.6□□□□□ -1.67
HMGB1P30-201ENST00000492455 KLF4O43474 513 aa4.59□□□□□ -1.67
HMGB1P30-201ENST00000492455 NOBOXO60393 691 aa4.59□□□□□ -1.67
HMGB1P30-201ENST00000492455 FZD7O75084 574 aa4.59□□□□□ -1.67
HMGB1P30-201ENST00000492455 RBL2Q08999 1139 aa4.59□□□□□ -1.67
HMGB1P30-201ENST00000492455 MLECQ14165 292 aa4.59□□□□□ -1.67
HMGB1P30-201ENST00000492455 TMC3Q7Z5M5 1100 aa4.59□□□□□ -1.67
HMGB1P30-201ENST00000492455 SLCO6A1Q86UG4 719 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms