RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 BADQ92934 168 aa9.88□□□□□ -0.83
SMARCB1-207ENST00000491967 DSCC1Q9BVC3 393 aa9.88□□□□□ -0.83
SMARCB1-207ENST00000491967 MAF1Q9H063 256 aa9.88□□□□□ -0.83
SMARCB1-207ENST00000491967 HOMER2Q9NSB8 354 aa9.88□□□□□ -0.83
SMARCB1-207ENST00000491967 PRKAG2Q9UGJ0 569 aa9.88□□□□□ -0.83
SMARCB1-207ENST00000491967 ZHX1Q9UKY1 873 aaPredicted RBP9.88□□□□□ -0.83
SMARCB1-207ENST00000491967 TBX21Q9UL17 535 aa9.88□□□□□ -0.83
SMARCB1-207ENST00000491967 PNMA2Q9UL42 364 aa9.88□□□□□ -0.83
SMARCB1-207ENST00000491967 RBM47A0AV96 593 aaKnown RBP9.87□□□□□ -0.83
SMARCB1-207ENST00000491967 TRIM6-TRIM34B2RNG4 842 aa9.87□□□□□ -0.83
SMARCB1-207ENST00000491967 HIP1O00291 1037 aa9.87□□□□□ -0.83
SMARCB1-207ENST00000491967 ALAS1P13196 640 aa9.87□□□□□ -0.83
SMARCB1-207ENST00000491967 HAND2P61296 217 aa9.87□□□□□ -0.83
SMARCB1-207ENST00000491967 IRX5P78411 483 aaPredicted RBP9.87□□□□□ -0.83
SMARCB1-207ENST00000491967 C9orf50Q5SZB4 431 aa9.87□□□□□ -0.83
SMARCB1-207ENST00000491967 SYDE2Q5VT97 1194 aa9.87□□□□□ -0.83
SMARCB1-207ENST00000491967 IQSEC1Q6DN90 963 aa9.87□□□□□ -0.83
SMARCB1-207ENST00000491967 B4GALNT3Q6L9W6 998 aa9.87□□□□□ -0.83
SMARCB1-207ENST00000491967 CLEC4DQ8WXI8 215 aa9.87□□□□□ -0.83
SMARCB1-207ENST00000491967 RILPL2Q969X0 211 aa9.87□□□□□ -0.83
SMARCB1-207ENST00000491967 RNF41Q9H4P4 317 aaPredicted RBP9.87□□□□□ -0.83
SMARCB1-207ENST00000491967 STARD7Q9NQZ5 370 aa9.87□□□□□ -0.83
SMARCB1-207ENST00000491967 STXBP5LQ9Y2K9 1186 aa9.87□□□□□ -0.83
SMARCB1-207ENST00000491967 NEDD4P46934 1319 aa9.86□□□□□ -0.83
SMARCB1-207ENST00000491967 WDR19Q8NEZ3 1342 aa9.86□□□□□ -0.83
SMARCB1-207ENST00000491967 CUL9Q8IWT3 2517 aa9.86□□□□□ -0.83
SMARCB1-207ENST00000491967 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.86□□□□□ -0.83
SMARCB1-207ENST00000491967 ARVCFO00192 962 aa9.86□□□□□ -0.83
SMARCB1-207ENST00000491967 CD4P01730 458 aa9.86□□□□□ -0.83
SMARCB1-207ENST00000491967 MYCNP04198 464 aaPredicted RBP9.86□□□□□ -0.83
SMARCB1-207ENST00000491967 ASGR1P07306 291 aa9.86□□□□□ -0.83
SMARCB1-207ENST00000491967 SMPD1P17405 629 aa9.86□□□□□ -0.83
SMARCB1-207ENST00000491967 EDNRBP24530 442 aa9.86□□□□□ -0.83
SMARCB1-207ENST00000491967 SLC16A2P36021 539 aa9.86□□□□□ -0.83
SMARCB1-207ENST00000491967 SLC4A3P48751 1232 aa9.86□□□□□ -0.83
SMARCB1-207ENST00000491967 EPHB4P54760 987 aa9.86□□□□□ -0.83
SMARCB1-207ENST00000491967 SNAP25P60880 206 aa9.86□□□□□ -0.83
SMARCB1-207ENST00000491967 SMAD3P84022 425 aaKnown RBP9.86□□□□□ -0.83
SMARCB1-207ENST00000491967 TNFAIP2Q03169 654 aa9.86□□□□□ -0.83
SMARCB1-207ENST00000491967 CCDC178Q5BJE1 867 aa9.86□□□□□ -0.83
SMARCB1-207ENST00000491967 GNASQ5JWF2 1037 aa9.86□□□□□ -0.83
SMARCB1-207ENST00000491967 CCDC174Q6PII3 467 aa9.86□□□□□ -0.83
SMARCB1-207ENST00000491967 CWC27Q6UX04 472 aaKnown RBP9.86□□□□□ -0.83
SMARCB1-207ENST00000491967 Q7L0L9 218 aa9.86□□□□□ -0.83
SMARCB1-207ENST00000491967 SLC17A8Q8NDX2 589 aa9.86□□□□□ -0.83
SMARCB1-207ENST00000491967 RGS22Q8NE09 1264 aa9.86□□□□□ -0.83
SMARCB1-207ENST00000491967 ESR2Q92731 530 aa9.86□□□□□ -0.83
SMARCB1-207ENST00000491967 SEZ6LQ9BYH1 1024 aa9.86□□□□□ -0.83
SMARCB1-207ENST00000491967 VTA1Q9NP79 307 aa9.86□□□□□ -0.83
SMARCB1-207ENST00000491967 CCPG1Q9ULG6 757 aa9.86□□□□□ -0.83
SMARCB1-207ENST00000491967 GRIN2DO15399 1336 aa9.85□□□□□ -0.83
SMARCB1-207ENST00000491967 DCDC2CA8MYV0 355 aa9.85□□□□□ -0.83
SMARCB1-207ENST00000491967 NFIBO00712 420 aa9.85□□□□□ -0.83
SMARCB1-207ENST00000491967 ZNF213O14771 459 aa9.85□□□□□ -0.83
SMARCB1-207ENST00000491967 PQBP1O60828 265 aaKnown RBP9.85□□□□□ -0.83
SMARCB1-207ENST00000491967 CABYRO75952 493 aa9.85□□□□□ -0.83
SMARCB1-207ENST00000491967 TIMP1P01033 207 aa9.85□□□□□ -0.83
SMARCB1-207ENST00000491967 C6orf222P0C671 652 aaPredicted RBP9.85□□□□□ -0.83
SMARCB1-207ENST00000491967 PDE4AP27815 886 aa9.85□□□□□ -0.83
SMARCB1-207ENST00000491967 IKQ13123 557 aaPredicted RBP9.85□□□□□ -0.83
SMARCB1-207ENST00000491967 BAATQ14032 418 aaPredicted RBP9.85□□□□□ -0.83
SMARCB1-207ENST00000491967 CCDC96Q2M329 555 aa9.85□□□□□ -0.83
SMARCB1-207ENST00000491967 RRP12Q5JTH9 1297 aaKnown RBP9.85□□□□□ -0.83
SMARCB1-207ENST00000491967 GPATCH4Q5T3I0 446 aaKnown RBP9.85□□□□□ -0.83
SMARCB1-207ENST00000491967 RASIP1Q5U651 963 aa9.85□□□□□ -0.83
SMARCB1-207ENST00000491967 FAM126BQ8IXS8 530 aa9.85□□□□□ -0.83
SMARCB1-207ENST00000491967 GLT1D1Q96MS3 346 aa9.85□□□□□ -0.83
SMARCB1-207ENST00000491967 PURBQ96QR8 312 aaKnown RBP9.85□□□□□ -0.83
SMARCB1-207ENST00000491967 IL25Q9H293 177 aa9.85□□□□□ -0.83
SMARCB1-207ENST00000491967 SPC25Q9HBM1 224 aa9.85□□□□□ -0.83
SMARCB1-207ENST00000491967 PRDM5Q9NQX1 630 aaPredicted RBP9.85□□□□□ -0.83
SMARCB1-207ENST00000491967 PDGFCQ9NRA1 345 aa9.85□□□□□ -0.83
SMARCB1-207ENST00000491967 TMEM39AQ9NV64 488 aa9.85□□□□□ -0.83
SMARCB1-207ENST00000491967 ZSWIM5Q9P217 1185 aa9.85□□□□□ -0.83
SMARCB1-207ENST00000491967 A0A0C4DFX4 3053 aa9.85□□□□□ -0.83
SMARCB1-207ENST00000491967 SCN10AQ9Y5Y9 1956 aa9.84□□□□□ -0.83
SMARCB1-207ENST00000491967 MROH7Q68CQ1 1323 aa9.84□□□□□ -0.83
SMARCB1-207ENST00000491967 FRMPD2Q68DX3 1309 aaPredicted RBP9.84□□□□□ -0.83
SMARCB1-207ENST00000491967 MYO9BQ13459 2157 aa9.84□□□□□ -0.83
SMARCB1-207ENST00000491967 MYH6P13533 1939 aa9.84□□□□□ -0.83
SMARCB1-207ENST00000491967 A0A0U1RQG5 324 aaPredicted RBP9.84□□□□□ -0.83
SMARCB1-207ENST00000491967 KDM4AO75164 1064 aa9.84□□□□□ -0.83
SMARCB1-207ENST00000491967 ALDH5A1P51649 535 aaPredicted RBP9.84□□□□□ -0.83
SMARCB1-207ENST00000491967 FSCN1Q16658 493 aaKnown RBP9.84□□□□□ -0.83
SMARCB1-207ENST00000491967 DUSP28Q4G0W2 176 aa9.84□□□□□ -0.83
SMARCB1-207ENST00000491967 MFSD5Q6N075 450 aa9.84□□□□□ -0.83
SMARCB1-207ENST00000491967 C16orf59Q7L2K0 433 aa9.84□□□□□ -0.83
SMARCB1-207ENST00000491967 TLK2Q86UE8 772 aa9.84□□□□□ -0.83
SMARCB1-207ENST00000491967 CHMP4CQ96CF2 233 aa9.84□□□□□ -0.83
SMARCB1-207ENST00000491967 YTHDC1Q96MU7 727 aaKnown RBP9.84□□□□□ -0.83
SMARCB1-207ENST00000491967 GUCD1Q96NT3 240 aa9.84□□□□□ -0.83
SMARCB1-207ENST00000491967 GPCPD1Q9NPB8 672 aa9.84□□□□□ -0.83
SMARCB1-207ENST00000491967 TOMM22Q9NS69 142 aa9.84□□□□□ -0.83
SMARCB1-207ENST00000491967 ADD3Q9UEY8 706 aaKnown RBP9.84□□□□□ -0.83
SMARCB1-207ENST00000491967 CTNNA3Q9UI47 895 aa9.84□□□□□ -0.83
SMARCB1-207ENST00000491967 DDX49Q9Y6V7 483 aaKnown RBP9.84□□□□□ -0.83
SMARCB1-207ENST00000491967 GSPT1P15170 499 aaKnown RBP9.83□□□□□ -0.84
SMARCB1-207ENST00000491967 RAG1P15918 1043 aa9.83□□□□□ -0.84
SMARCB1-207ENST00000491967 GHRHRQ02643 423 aa9.83□□□□□ -0.84
SMARCB1-207ENST00000491967 FPGSQ05932 587 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms