RNA–Protein interactions for RNA: ENST00000489921.1

TNFRSF1B-202, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 3

Gene TNFRSF1B, Length 409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-202ENST00000489921 PURBQ96QR8 312 aaKnown RBP22.9■■□□□ 1.26
TNFRSF1B-202ENST00000489921 MTMR10Q9NXD2 777 aa22.9■■□□□ 1.26
TNFRSF1B-202ENST00000489921 UNC80Q8N2C7 3258 aa22.9■■□□□ 1.26
TNFRSF1B-202ENST00000489921 NEDD4P46934 1319 aa22.89■■□□□ 1.26
TNFRSF1B-202ENST00000489921 PDHBP11177 359 aa22.89■■□□□ 1.25
TNFRSF1B-202ENST00000489921 FAAP100Q0VG06 881 aa22.89■■□□□ 1.25
TNFRSF1B-202ENST00000489921 CCDC96Q2M329 555 aa22.89■■□□□ 1.25
TNFRSF1B-202ENST00000489921 MFSD6Q6ZSS7 791 aa22.89■■□□□ 1.25
TNFRSF1B-202ENST00000489921 FRMPD2Q68DX3 1309 aaPredicted RBP22.88■■□□□ 1.25
TNFRSF1B-202ENST00000489921 KIAA0355O15063 1070 aa22.88■■□□□ 1.25
TNFRSF1B-202ENST00000489921 PQBP1O60828 265 aaKnown RBP22.88■■□□□ 1.25
TNFRSF1B-202ENST00000489921 ASGR1P07306 291 aa22.88■■□□□ 1.25
TNFRSF1B-202ENST00000489921 CLTBP09497 229 aa22.88■■□□□ 1.25
TNFRSF1B-202ENST00000489921 SNHG28P0DPA3 235 aa22.88■■□□□ 1.25
TNFRSF1B-202ENST00000489921 PCP11498 1178 aaKnown RBP22.88■■□□□ 1.25
TNFRSF1B-202ENST00000489921 SYDE2Q5VT97 1194 aa22.88■■□□□ 1.25
TNFRSF1B-202ENST00000489921 CWC27Q6UX04 472 aaKnown RBP22.88■■□□□ 1.25
TNFRSF1B-202ENST00000489921 TTC14Q96N46 770 aa22.88■■□□□ 1.25
TNFRSF1B-202ENST00000489921 TOX2Q96NM4 488 aa22.88■■□□□ 1.25
TNFRSF1B-202ENST00000489921 GPCPD1Q9NPB8 672 aa22.88■■□□□ 1.25
TNFRSF1B-202ENST00000489921 STARD7Q9NQZ5 370 aa22.88■■□□□ 1.25
TNFRSF1B-202ENST00000489921 CCPG1Q9ULG6 757 aa22.88■■□□□ 1.25
TNFRSF1B-202ENST00000489921 C6orf222P0C671 652 aaPredicted RBP22.87■■□□□ 1.25
TNFRSF1B-202ENST00000489921 PTGS1P23219 599 aa22.87■■□□□ 1.25
TNFRSF1B-202ENST00000489921 CDK7P50613 346 aa22.87■■□□□ 1.25
TNFRSF1B-202ENST00000489921 NUP133Q8WUM0 1156 aa22.87■■□□□ 1.25
TNFRSF1B-202ENST00000489921 GNEQ9Y223 722 aaKnown RBP22.87■■□□□ 1.25
TNFRSF1B-202ENST00000489921 ELP1O95163 1332 aa22.86■■□□□ 1.25
TNFRSF1B-202ENST00000489921 ASB14A6NK59 587 aa22.86■■□□□ 1.25
TNFRSF1B-202ENST00000489921 EPHB4P54760 987 aa22.86■■□□□ 1.25
TNFRSF1B-202ENST00000489921 MFAP1P55081 439 aaKnown RBP22.86■■□□□ 1.25
TNFRSF1B-202ENST00000489921 ZNF543Q08ER8 600 aa22.86■■□□□ 1.25
TNFRSF1B-202ENST00000489921 TMEM63BQ5T3F8 832 aa22.86■■□□□ 1.25
TNFRSF1B-202ENST00000489921 TAPT1Q6NXT6 567 aa22.86■■□□□ 1.25
TNFRSF1B-202ENST00000489921 MORC4Q8TE76 937 aa22.86■■□□□ 1.25
TNFRSF1B-202ENST00000489921 IL25Q9H293 177 aa22.86■■□□□ 1.25
TNFRSF1B-202ENST00000489921 PDGFCQ9NRA1 345 aa22.86■■□□□ 1.25
TNFRSF1B-202ENST00000489921 NFIBO00712 420 aa22.85■■□□□ 1.25
TNFRSF1B-202ENST00000489921 PDE4AP27815 886 aa22.85■■□□□ 1.25
TNFRSF1B-202ENST00000489921 TNFAIP2Q03169 654 aa22.85■■□□□ 1.25
TNFRSF1B-202ENST00000489921 GNASQ5JWF2 1037 aa22.85■■□□□ 1.25
TNFRSF1B-202ENST00000489921 PCSK9Q8NBP7 692 aaKnown RBP22.85■■□□□ 1.25
TNFRSF1B-202ENST00000489921 CLEC4DQ8WXI8 215 aa22.85■■□□□ 1.25
TNFRSF1B-202ENST00000489921 ZKSCAN3Q9BRR0 538 aa22.85■■□□□ 1.25
TNFRSF1B-202ENST00000489921 SUPT16HQ9Y5B9 1047 aaKnown RBP22.85■■□□□ 1.25
TNFRSF1B-202ENST00000489921 ZNF213O14771 459 aa22.84■■□□□ 1.25
TNFRSF1B-202ENST00000489921 SMPD1P17405 629 aa22.84■■□□□ 1.25
TNFRSF1B-202ENST00000489921 BEX3Q00994 111 aa22.84■■□□□ 1.25
TNFRSF1B-202ENST00000489921 BAATQ14032 418 aaPredicted RBP22.84■■□□□ 1.25
TNFRSF1B-202ENST00000489921 FAM109BQ6ICB4 259 aaPredicted RBP22.84■■□□□ 1.25
TNFRSF1B-202ENST00000489921 NSMFQ6X4W1 530 aa22.84■■□□□ 1.25
TNFRSF1B-202ENST00000489921 RNF41Q9H4P4 317 aaPredicted RBP22.84■■□□□ 1.25
TNFRSF1B-202ENST00000489921 DGKHQ86XP1 1220 aa22.83■■□□□ 1.25
TNFRSF1B-202ENST00000489921 ESR2Q92731 530 aa22.83■■□□□ 1.25
TNFRSF1B-202ENST00000489921 GLT1D1Q96MS3 346 aa22.83■■□□□ 1.25
TNFRSF1B-202ENST00000489921 DSCC1Q9BVC3 393 aa22.83■■□□□ 1.25
TNFRSF1B-202ENST00000489921 DIAPH3Q9NSV4 1193 aa22.83■■□□□ 1.25
TNFRSF1B-202ENST00000489921 TMEM39AQ9NV64 488 aa22.83■■□□□ 1.25
TNFRSF1B-202ENST00000489921 TBX21Q9UL17 535 aa22.83■■□□□ 1.25
TNFRSF1B-202ENST00000489921 FBXO16Q8IX29 292 aaPredicted RBP22.82■■□□□ 1.24
TNFRSF1B-202ENST00000489921 ANKS1AQ92625 1134 aa22.82■■□□□ 1.24
TNFRSF1B-202ENST00000489921 SPC25Q9HBM1 224 aa22.82■■□□□ 1.24
TNFRSF1B-202ENST00000489921 DCDC2CA8MYV0 355 aa22.81■■□□□ 1.24
TNFRSF1B-202ENST00000489921 ARVCFO00192 962 aa22.81■■□□□ 1.24
TNFRSF1B-202ENST00000489921 HIP1O00291 1037 aa22.81■■□□□ 1.24
TNFRSF1B-202ENST00000489921 KDM4AO75164 1064 aa22.81■■□□□ 1.24
TNFRSF1B-202ENST00000489921 GSPT1P15170 499 aaKnown RBP22.81■■□□□ 1.24
TNFRSF1B-202ENST00000489921 RAG1P15918 1043 aa22.81■■□□□ 1.24
TNFRSF1B-202ENST00000489921 EEPD1Q7L9B9 569 aa22.81■■□□□ 1.24
TNFRSF1B-202ENST00000489921 CPVLQ9H3G5 476 aa22.81■■□□□ 1.24
TNFRSF1B-202ENST00000489921 STXBP5LQ9Y2K9 1186 aa22.81■■□□□ 1.24
TNFRSF1B-202ENST00000489921 A0A0U1RQG5 324 aaPredicted RBP22.8■■□□□ 1.24
TNFRSF1B-202ENST00000489921 TIMP1P01033 207 aa22.8■■□□□ 1.24
TNFRSF1B-202ENST00000489921 GOLGA8HP0CJ92 632 aa22.8■■□□□ 1.24
TNFRSF1B-202ENST00000489921 ALDH5A1P51649 535 aaPredicted RBP22.8■■□□□ 1.24
TNFRSF1B-202ENST00000489921 IQSEC1Q6DN90 963 aa22.8■■□□□ 1.24
TNFRSF1B-202ENST00000489921 SLC30A10Q6XR72 485 aa22.8■■□□□ 1.24
TNFRSF1B-202ENST00000489921 TLK2Q86UE8 772 aa22.8■■□□□ 1.24
TNFRSF1B-202ENST00000489921 SLC43A3Q8NBI5 491 aa22.8■■□□□ 1.24
TNFRSF1B-202ENST00000489921 GUCD1Q96NT3 240 aa22.8■■□□□ 1.24
TNFRSF1B-202ENST00000489921 ZSWIM5Q9P217 1185 aa22.8■■□□□ 1.24
TNFRSF1B-202ENST00000489921 PRUNE2Q8WUY3 3088 aa22.8■■□□□ 1.24
TNFRSF1B-202ENST00000489921 GRIN2DO15399 1336 aa22.8■■□□□ 1.24
TNFRSF1B-202ENST00000489921 B4E1Z4 1266 aa22.79■■□□□ 1.24
TNFRSF1B-202ENST00000489921 FAM126BQ8IXS8 530 aa22.79■■□□□ 1.24
TNFRSF1B-202ENST00000489921 UBA5Q9GZZ9 404 aa22.79■■□□□ 1.24
TNFRSF1B-202ENST00000489921 VTA1Q9NP79 307 aa22.79■■□□□ 1.24
TNFRSF1B-202ENST00000489921 WDR19Q8NEZ3 1342 aa22.79■■□□□ 1.24
TNFRSF1B-202ENST00000489921 CHD9Q3L8U1 2897 aa22.78■■□□□ 1.24
TNFRSF1B-202ENST00000489921 DYNC1LI2O43237 492 aaPredicted RBP22.78■■□□□ 1.24
TNFRSF1B-202ENST00000489921 CD4P01730 458 aa22.78■■□□□ 1.24
TNFRSF1B-202ENST00000489921 NT5C2P49902 561 aa22.78■■□□□ 1.24
TNFRSF1B-202ENST00000489921 FSCN1Q16658 493 aaKnown RBP22.78■■□□□ 1.24
TNFRSF1B-202ENST00000489921 GPATCH4Q5T3I0 446 aaKnown RBP22.78■■□□□ 1.24
TNFRSF1B-202ENST00000489921 CXCL17Q6UXB2 119 aa22.78■■□□□ 1.24
TNFRSF1B-202ENST00000489921 NOL8Q76FK4 1167 aaKnown RBP22.78■■□□□ 1.24
TNFRSF1B-202ENST00000489921 ENAHQ8N8S7 591 aaPredicted RBP22.78■■□□□ 1.24
TNFRSF1B-202ENST00000489921 PNMA1Q8ND90 353 aa22.78■■□□□ 1.24
TNFRSF1B-202ENST00000489921 ZSCAN10Q96SZ4 725 aaPredicted RBP22.78■■□□□ 1.24
TNFRSF1B-202ENST00000489921 Q9Y3F1 56 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms