RNA–Protein interactions for RNA: ENST00000489158.1

EXOSC1-211, Transcript of exosome component 1, humanhuman

TSL 2

Gene EXOSC1, Length 2,113 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-211ENST00000489158 TMTC3Q6ZXV5 915 aa10.19□□□□□ -0.78
EXOSC1-211ENST00000489158 CLEC10AQ8IUN9 316 aa10.19□□□□□ -0.78
EXOSC1-211ENST00000489158 FBXO18Q8NFZ0 1043 aa10.19□□□□□ -0.78
EXOSC1-211ENST00000489158 CCDC34Q96HJ3 373 aa10.19□□□□□ -0.78
EXOSC1-211ENST00000489158 NYAP2Q9P242 653 aa10.19□□□□□ -0.78
EXOSC1-211ENST00000489158 PPP2R2CQ9Y2T4 447 aa10.19□□□□□ -0.78
EXOSC1-211ENST00000489158 ATAD5Q96QE3 1844 aa10.19□□□□□ -0.78
EXOSC1-211ENST00000489158 DDNO94850 711 aaPredicted RBP10.19□□□□□ -0.78
EXOSC1-211ENST00000489158 PLEKHA8P1O95397 391 aa10.19□□□□□ -0.78
EXOSC1-211ENST00000489158 DEXIO95424 95 aa10.19□□□□□ -0.78
EXOSC1-211ENST00000489158 SMARCA1P28370 1054 aa10.19□□□□□ -0.78
EXOSC1-211ENST00000489158 SYKP43405 635 aa10.19□□□□□ -0.78
EXOSC1-211ENST00000489158 MYL5Q02045 173 aa10.19□□□□□ -0.78
EXOSC1-211ENST00000489158 TRIM29Q14134 588 aa10.19□□□□□ -0.78
EXOSC1-211ENST00000489158 SMC1AQ14683 1233 aaKnown RBP10.19□□□□□ -0.78
EXOSC1-211ENST00000489158 KRBA2Q6ZNG9 492 aa10.19□□□□□ -0.78
EXOSC1-211ENST00000489158 BRAPQ7Z569 592 aa10.19□□□□□ -0.78
EXOSC1-211ENST00000489158 LRRC47Q8N1G4 583 aaKnown RBP10.19□□□□□ -0.78
EXOSC1-211ENST00000489158 MKL1Q969V6 931 aa10.19□□□□□ -0.78
EXOSC1-211ENST00000489158 WDR24Q96S15 920 aa10.19□□□□□ -0.78
EXOSC1-211ENST00000489158 FEZ2Q9UHY8 353 aaPredicted RBP10.19□□□□□ -0.78
EXOSC1-211ENST00000489158 TUBE1Q9UJT0 475 aa10.19□□□□□ -0.78
EXOSC1-211ENST00000489158 WDR90Q96KV7 1748 aa10.18□□□□□ -0.78
EXOSC1-211ENST00000489158 PRPF3O43395 683 aaKnown RBP10.18□□□□□ -0.78
EXOSC1-211ENST00000489158 RAD21O60216 631 aa10.18□□□□□ -0.78
EXOSC1-211ENST00000489158 GNG11P61952 73 aa10.18□□□□□ -0.78
EXOSC1-211ENST00000489158 MAP3K9P80192 1104 aa10.18□□□□□ -0.78
EXOSC1-211ENST00000489158 KIF23Q02241 960 aaPredicted RBP10.18□□□□□ -0.78
EXOSC1-211ENST00000489158 PNOCQ13519 176 aa10.18□□□□□ -0.78
EXOSC1-211ENST00000489158 MIGA2Q7L4E1 593 aa10.18□□□□□ -0.78
EXOSC1-211ENST00000489158 FCHSD1Q86WN1 690 aa10.18□□□□□ -0.78
EXOSC1-211ENST00000489158 TMEM139Q8IV31 216 aa10.18□□□□□ -0.78
EXOSC1-211ENST00000489158 GPR161Q8N6U8 529 aaKnown RBP10.18□□□□□ -0.78
EXOSC1-211ENST00000489158 AIFM3Q96NN9 605 aa10.18□□□□□ -0.78
EXOSC1-211ENST00000489158 FANCLQ9NW38 375 aa10.18□□□□□ -0.78
EXOSC1-211ENST00000489158 ASTN2O75129 1339 aaPredicted RBP10.18□□□□□ -0.78
EXOSC1-211ENST00000489158 UBE2Q2LH0YL09 131 aa10.18□□□□□ -0.78
EXOSC1-211ENST00000489158 PPP2R3AQ06190 1150 aa10.18□□□□□ -0.78
EXOSC1-211ENST00000489158 ASPRV1Q53RT3 343 aa10.18□□□□□ -0.78
EXOSC1-211ENST00000489158 DCAF15Q66K64 600 aa10.18□□□□□ -0.78
EXOSC1-211ENST00000489158 CDAN1Q8IWY9 1227 aa10.18□□□□□ -0.78
EXOSC1-211ENST00000489158 PDILTQ8N807 584 aa10.18□□□□□ -0.78
EXOSC1-211ENST00000489158 TRPM4Q8TD43 1214 aa10.18□□□□□ -0.78
EXOSC1-211ENST00000489158 TEPSINQ96N21 525 aa10.18□□□□□ -0.78
EXOSC1-211ENST00000489158 PARD6BQ9BYG5 372 aa10.18□□□□□ -0.78
EXOSC1-211ENST00000489158 TSPYL1Q9H0U9 437 aa10.18□□□□□ -0.78
EXOSC1-211ENST00000489158 DEFB129Q9H1M3 183 aa10.18□□□□□ -0.78
EXOSC1-211ENST00000489158 BAZ2BQ9UIF8 2168 aaKnown RBP10.18□□□□□ -0.78
EXOSC1-211ENST00000489158 CNTNAP5Q8WYK1 1306 aa10.17□□□□□ -0.78
EXOSC1-211ENST00000489158 hCG_1642624A0A1W2PR95 340 aa10.17□□□□□ -0.78
EXOSC1-211ENST00000489158 PALM3A6NDB9 673 aaPredicted RBP10.17□□□□□ -0.78
EXOSC1-211ENST00000489158 GLTPD2A6NH11 291 aa10.17□□□□□ -0.78
EXOSC1-211ENST00000489158 ARHGAP6O43182 974 aa10.17□□□□□ -0.78
EXOSC1-211ENST00000489158 PARP1P09874 1014 aaKnown RBP10.17□□□□□ -0.78
EXOSC1-211ENST00000489158 SNHG28P0DPA3 235 aa10.17□□□□□ -0.78
EXOSC1-211ENST00000489158 XBP1P17861 261 aa10.17□□□□□ -0.78
EXOSC1-211ENST00000489158 GUCY1A2P33402 732 aa10.17□□□□□ -0.78
EXOSC1-211ENST00000489158 EPS15P42566 896 aa10.17□□□□□ -0.78
EXOSC1-211ENST00000489158 GYS2P54840 703 aa10.17□□□□□ -0.78
EXOSC1-211ENST00000489158 ICA1Q05084 483 aa10.17□□□□□ -0.78
EXOSC1-211ENST00000489158 FUT2Q10981 343 aa10.17□□□□□ -0.78
EXOSC1-211ENST00000489158 GPS2Q13227 327 aa10.17□□□□□ -0.78
EXOSC1-211ENST00000489158 SLC39A14Q15043 492 aa10.17□□□□□ -0.78
EXOSC1-211ENST00000489158 MUM1L1Q5H9M0 696 aa10.17□□□□□ -0.78
EXOSC1-211ENST00000489158 ANGEL2Q5VTE6 544 aaKnown RBP10.17□□□□□ -0.78
EXOSC1-211ENST00000489158 USP50Q70EL3 339 aaPredicted RBP10.17□□□□□ -0.78
EXOSC1-211ENST00000489158 RSRC2Q7L4I2 434 aaKnown RBP10.17□□□□□ -0.78
EXOSC1-211ENST00000489158 RASGRP2Q7LDG7 609 aa10.17□□□□□ -0.78
EXOSC1-211ENST00000489158 STAG2Q8N3U4 1231 aa10.17□□□□□ -0.78
EXOSC1-211ENST00000489158 ARFGAP3Q9NP61 516 aa10.17□□□□□ -0.78
EXOSC1-211ENST00000489158 MRFAP1Q9Y605 127 aa10.17□□□□□ -0.78
EXOSC1-211ENST00000489158 V9GY48 417 aaPredicted RBP10.17□□□□□ -0.78
EXOSC1-211ENST00000489158 DOCK1Q14185 1865 aa10.17□□□□□ -0.78
EXOSC1-211ENST00000489158 IQCA1LA6NCM1 817 aa10.16□□□□□ -0.78
EXOSC1-211ENST00000489158 GH2P01242 217 aa10.16□□□□□ -0.78
EXOSC1-211ENST00000489158 GOLGA8HP0CJ92 632 aa10.16□□□□□ -0.78
EXOSC1-211ENST00000489158 SEPT2Q15019 361 aa10.16□□□□□ -0.78
EXOSC1-211ENST00000489158 SHROOM1Q2M3G4 852 aaPredicted RBP10.16□□□□□ -0.78
EXOSC1-211ENST00000489158 HSP90AA4PQ58FG1 418 aa10.16□□□□□ -0.78
EXOSC1-211ENST00000489158 SHC4Q6S5L8 630 aa10.16□□□□□ -0.78
EXOSC1-211ENST00000489158 TOGARAM2Q6ZUX3 1019 aa10.16□□□□□ -0.78
EXOSC1-211ENST00000489158 SRBD1Q8N5C6 995 aaKnown RBP10.16□□□□□ -0.78
EXOSC1-211ENST00000489158 BAG1Q99933 345 aaPredicted RBP10.16□□□□□ -0.78
EXOSC1-211ENST00000489158 SPZ1Q9BXG8 430 aa10.16□□□□□ -0.78
EXOSC1-211ENST00000489158 SH2D4AQ9H788 454 aa10.16□□□□□ -0.78
EXOSC1-211ENST00000489158 INTS13Q9NVM9 706 aa10.16□□□□□ -0.78
EXOSC1-211ENST00000489158 GGA3Q9NZ52 723 aa10.16□□□□□ -0.78
EXOSC1-211ENST00000489158 MAD2L2Q9UI95 211 aa10.16□□□□□ -0.78
EXOSC1-211ENST00000489158 ASNSP08243 561 aa10.16□□□□□ -0.78
EXOSC1-211ENST00000489158 PDHBP11177 359 aa10.16□□□□□ -0.78
EXOSC1-211ENST00000489158 EEF2P13639 858 aaKnown RBP10.16□□□□□ -0.78
EXOSC1-211ENST00000489158 CAP2P40123 477 aa10.16□□□□□ -0.78
EXOSC1-211ENST00000489158 TBX2Q13207 712 aaPredicted RBP10.16□□□□□ -0.78
EXOSC1-211ENST00000489158 GPATCH4Q5T3I0 446 aaKnown RBP10.16□□□□□ -0.78
EXOSC1-211ENST00000489158 KRT40Q6A162 431 aa10.16□□□□□ -0.78
EXOSC1-211ENST00000489158 USP17L2Q6R6M4 530 aa10.16□□□□□ -0.78
EXOSC1-211ENST00000489158 GMCL1P1Q8NEA9 526 aa10.16□□□□□ -0.78
EXOSC1-211ENST00000489158 ZC3H15Q8WU90 426 aaKnown RBP10.16□□□□□ -0.78
EXOSC1-211ENST00000489158 DCAF4Q8WV16 495 aa10.16□□□□□ -0.78
EXOSC1-211ENST00000489158 KIFC2Q96AC6 838 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms