RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 THBDP07204 575 aa5.74□□□□□ -1.49
ECHDC1-217ENST00000488087 FAM153BP0C7A2 387 aa5.74□□□□□ -1.49
ECHDC1-217ENST00000488087 RAC2P15153 192 aa5.74□□□□□ -1.49
ECHDC1-217ENST00000488087 SLC14A2Q15849 920 aa5.74□□□□□ -1.49
ECHDC1-217ENST00000488087 RCSD1Q6JBY9 416 aa5.74□□□□□ -1.49
ECHDC1-217ENST00000488087 CYP2R1Q6VVX0 501 aa5.74□□□□□ -1.49
ECHDC1-217ENST00000488087 JAMLQ86YT9 394 aa5.74□□□□□ -1.49
ECHDC1-217ENST00000488087 OXR1Q8N573 874 aa5.74□□□□□ -1.49
ECHDC1-217ENST00000488087 ANKS4BQ8N8V4 417 aa5.74□□□□□ -1.49
ECHDC1-217ENST00000488087 ZBTB38Q8NAP3 1195 aaPredicted RBP5.74□□□□□ -1.49
ECHDC1-217ENST00000488087 KCTD13Q8WZ19 329 aa5.74□□□□□ -1.49
ECHDC1-217ENST00000488087 MAP6Q96JE9 813 aa5.74□□□□□ -1.49
ECHDC1-217ENST00000488087 PTCHD1Q96NR3 888 aa5.74□□□□□ -1.49
ECHDC1-217ENST00000488087 GPRC5CQ9NQ84 441 aa5.74□□□□□ -1.49
ECHDC1-217ENST00000488087 OAS3Q9Y6K5 1087 aaKnown RBP5.74□□□□□ -1.49
ECHDC1-217ENST00000488087 NPHP3-ACAD11A0A0J9YXS1 232 aa5.73□□□□□ -1.49
ECHDC1-217ENST00000488087 ADCY3O60266 1144 aa5.73□□□□□ -1.49
ECHDC1-217ENST00000488087 FGFR1P11362 822 aa5.73□□□□□ -1.49
ECHDC1-217ENST00000488087 PABPC1P11940 636 aaKnown RBP5.73□□□□□ -1.49
ECHDC1-217ENST00000488087 PAMP19021 973 aa5.73□□□□□ -1.49
ECHDC1-217ENST00000488087 GFRA1P56159 465 aa5.73□□□□□ -1.49
ECHDC1-217ENST00000488087 CHRNEQ04844 493 aa5.73□□□□□ -1.49
ECHDC1-217ENST00000488087 LAPTM5Q13571 262 aa5.73□□□□□ -1.49
ECHDC1-217ENST00000488087 PRSS53Q2L4Q9 553 aa5.73□□□□□ -1.49
ECHDC1-217ENST00000488087 C2orf27AQ580R0 203 aa5.73□□□□□ -1.49
ECHDC1-217ENST00000488087 YOD1Q5VVQ6 348 aaPredicted RBP5.73□□□□□ -1.49
ECHDC1-217ENST00000488087 HLA-DQA1Q5Y7H0 255 aa5.73□□□□□ -1.49
ECHDC1-217ENST00000488087 NSMFQ6X4W1 530 aa5.73□□□□□ -1.49
ECHDC1-217ENST00000488087 CEP128Q6ZU80 1094 aa5.73□□□□□ -1.49
ECHDC1-217ENST00000488087 SPPL2CQ8IUH8 684 aa5.73□□□□□ -1.49
ECHDC1-217ENST00000488087 PDZD8Q8NEN9 1154 aa5.73□□□□□ -1.49
ECHDC1-217ENST00000488087 SH3TC2Q8TF17 1288 aa5.73□□□□□ -1.49
ECHDC1-217ENST00000488087 COPS5Q92905 334 aa5.73□□□□□ -1.49
ECHDC1-217ENST00000488087 CLEC1BQ9P126 229 aa5.73□□□□□ -1.49
ECHDC1-217ENST00000488087 TNFRSF10DQ9UBN6 386 aa5.73□□□□□ -1.49
ECHDC1-217ENST00000488087 EBF1Q9UH73 591 aa5.73□□□□□ -1.49
ECHDC1-217ENST00000488087 ZNF281Q9Y2X9 895 aa5.73□□□□□ -1.49
ECHDC1-217ENST00000488087 TRBV23OR9-2A0A075B6M9 112 aa5.72□□□□□ -1.49
ECHDC1-217ENST00000488087 A0A1W2PQ27 194 aa5.72□□□□□ -1.49
ECHDC1-217ENST00000488087 A0A1W2PQ64 194 aa5.72□□□□□ -1.49
ECHDC1-217ENST00000488087 A0A1W2PQC6 194 aa5.72□□□□□ -1.49
ECHDC1-217ENST00000488087 A0A1W2PQD8 194 aa5.72□□□□□ -1.49
ECHDC1-217ENST00000488087 FITM1A5D6W6 292 aa5.72□□□□□ -1.49
ECHDC1-217ENST00000488087 PLS3P13797 630 aa5.72□□□□□ -1.49
ECHDC1-217ENST00000488087 GDNFP39905 211 aa5.72□□□□□ -1.49
ECHDC1-217ENST00000488087 KIR2DL1P43626 348 aaPredicted RBP5.72□□□□□ -1.49
ECHDC1-217ENST00000488087 KIR2DL2P43627 348 aaPredicted RBP5.72□□□□□ -1.49
ECHDC1-217ENST00000488087 USP53Q70EK8 1073 aa5.72□□□□□ -1.49
ECHDC1-217ENST00000488087 TMEM145Q8NBT3 493 aa5.72□□□□□ -1.49
ECHDC1-217ENST00000488087 ZSWIM2Q8NEG5 633 aa5.72□□□□□ -1.49
ECHDC1-217ENST00000488087 LINC01599Q8WXQ3 324 aa5.72□□□□□ -1.49
ECHDC1-217ENST00000488087 HHIPL1Q96JK4 782 aa5.72□□□□□ -1.49
ECHDC1-217ENST00000488087 SLC26A8Q96RN1 970 aa5.72□□□□□ -1.49
ECHDC1-217ENST00000488087 G6PC3Q9BUM1 346 aa5.72□□□□□ -1.49
ECHDC1-217ENST00000488087 PTCH2Q9Y6C5 1203 aa5.72□□□□□ -1.49
ECHDC1-217ENST00000488087 MRPL42Q9Y6G3 142 aaKnown RBP5.72□□□□□ -1.49
ECHDC1-217ENST00000488087 TRBV23-1A0A0A0MS06 115 aa5.71□□□□□ -1.5
ECHDC1-217ENST00000488087 FADS2P1A8MWK0 482 aa5.71□□□□□ -1.5
ECHDC1-217ENST00000488087 MEFVO15553 781 aaPredicted RBP5.71□□□□□ -1.5
ECHDC1-217ENST00000488087 SCG5P05408 212 aa5.71□□□□□ -1.5
ECHDC1-217ENST00000488087 L1CAMP32004 1257 aa5.71□□□□□ -1.5
ECHDC1-217ENST00000488087 IRAK1P51617 712 aa5.71□□□□□ -1.5
ECHDC1-217ENST00000488087 RTP1P59025 263 aa5.71□□□□□ -1.5
ECHDC1-217ENST00000488087 ERVFC1P60507 584 aa5.71□□□□□ -1.5
ECHDC1-217ENST00000488087 MAP4K2Q12851 820 aa5.71□□□□□ -1.5
ECHDC1-217ENST00000488087 LONRF2Q1L5Z9 754 aa5.71□□□□□ -1.5
ECHDC1-217ENST00000488087 ZC3H12BQ5HYM0 836 aaKnown RBP5.71□□□□□ -1.5
ECHDC1-217ENST00000488087 FAM209AQ5JX71 171 aa5.71□□□□□ -1.5
ECHDC1-217ENST00000488087 FOXB2Q5VYV0 432 aa5.71□□□□□ -1.5
ECHDC1-217ENST00000488087 GIMAP6Q6P9H5 292 aa5.71□□□□□ -1.5
ECHDC1-217ENST00000488087 JAZF1Q86VZ6 243 aa5.71□□□□□ -1.5
ECHDC1-217ENST00000488087 CPNE8Q86YQ8 564 aa5.71□□□□□ -1.5
ECHDC1-217ENST00000488087 SCUBE1Q8IWY4 988 aa5.71□□□□□ -1.5
ECHDC1-217ENST00000488087 PPIL6Q8IXY8 311 aa5.71□□□□□ -1.5
ECHDC1-217ENST00000488087 TMEM52Q8NDY8 209 aa5.71□□□□□ -1.5
ECHDC1-217ENST00000488087 FRS2Q8WU20 508 aa5.71□□□□□ -1.5
ECHDC1-217ENST00000488087 MYLIPQ8WY64 445 aa5.71□□□□□ -1.5
ECHDC1-217ENST00000488087 OSBP2Q969R2 916 aa5.71□□□□□ -1.5
ECHDC1-217ENST00000488087 C19orf73Q9NVV2 129 aa5.71□□□□□ -1.5
ECHDC1-217ENST00000488087 CTNND2Q9UQB3 1225 aa5.71□□□□□ -1.5
ECHDC1-217ENST00000488087 TMA7Q9Y2S6 64 aaKnown RBP5.71□□□□□ -1.5
ECHDC1-217ENST00000488087 TAF6LQ9Y6J9 622 aa5.71□□□□□ -1.5
ECHDC1-217ENST00000488087 A0A1W2PQ45 241 aaPredicted RBP5.7□□□□□ -1.5
ECHDC1-217ENST00000488087 A0A1W2PQY0 241 aa5.7□□□□□ -1.5
ECHDC1-217ENST00000488087 DLX3O60479 287 aa5.7□□□□□ -1.5
ECHDC1-217ENST00000488087 HPXP02790 462 aa5.7□□□□□ -1.5
ECHDC1-217ENST00000488087 TRHRP34981 398 aaPredicted RBP5.7□□□□□ -1.5
ECHDC1-217ENST00000488087 AFMP43652 599 aa5.7□□□□□ -1.5
ECHDC1-217ENST00000488087 SUMO1P63165 101 aaKnown RBP5.7□□□□□ -1.5
ECHDC1-217ENST00000488087 CYP4F3Q08477 520 aa5.7□□□□□ -1.5
ECHDC1-217ENST00000488087 TMEM67Q5HYA8 995 aa5.7□□□□□ -1.5
ECHDC1-217ENST00000488087 KRTAP5-3Q6L8H2 238 aa5.7□□□□□ -1.5
ECHDC1-217ENST00000488087 NPLOC4Q8TAT6 608 aa5.7□□□□□ -1.5
ECHDC1-217ENST00000488087 EXOC2Q96KP1 924 aa5.7□□□□□ -1.5
ECHDC1-217ENST00000488087 RNPC3Q96LT9 517 aaKnown RBP5.7□□□□□ -1.5
ECHDC1-217ENST00000488087 C19orf44Q9H6X5 657 aa5.7□□□□□ -1.5
ECHDC1-217ENST00000488087 KANSL2Q9H9L4 492 aa5.7□□□□□ -1.5
ECHDC1-217ENST00000488087 GPR160Q9UJ42 338 aa5.7□□□□□ -1.5
ECHDC1-217ENST00000488087 ESYT3A0FGR9 886 aa5.69□□□□□ -1.5
ECHDC1-217ENST00000488087 WTIPA6NIX2 430 aaPredicted RBP5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms