RNA–Protein interactions for RNA: ENST00000484763.1

VCPKMT-203, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-203ENST00000484763 GTF2A2P52657 109 aa23.42■■□□□ 1.34
VCPKMT-203ENST00000484763 PABPC4Q13310 644 aaKnown RBP eCLIP23.42■■□□□ 1.34
VCPKMT-203ENST00000484763 KRT25Q7Z3Z0 450 aa23.42■■□□□ 1.34
VCPKMT-203ENST00000484763 TMEM87AQ8NBN3 555 aa23.42■■□□□ 1.34
VCPKMT-203ENST00000484763 NOL7Q9UMY1 257 aaKnown RBP23.42■■□□□ 1.34
VCPKMT-203ENST00000484763 FAM205CA6NFA0 338 aa23.41■■□□□ 1.34
VCPKMT-203ENST00000484763 TAL1P17542 331 aaPredicted RBP23.41■■□□□ 1.34
VCPKMT-203ENST00000484763 PTMSP20962 102 aa23.41■■□□□ 1.34
VCPKMT-203ENST00000484763 SPRYD7Q5W111 196 aa23.41■■□□□ 1.34
VCPKMT-203ENST00000484763 POLR3EQ9NVU0 708 aa23.41■■□□□ 1.34
VCPKMT-203ENST00000484763 MRPL11Q9Y3B7 192 aaKnown RBP23.41■■□□□ 1.34
VCPKMT-203ENST00000484763 RBBP6Q7Z6E9 1792 aaKnown RBP23.41■■□□□ 1.34
VCPKMT-203ENST00000484763 CETPP11597 493 aa23.4■■□□□ 1.34
VCPKMT-203ENST00000484763 OAZ1P54368 228 aa23.4■■□□□ 1.34
VCPKMT-203ENST00000484763 IRX3P78415 501 aaPredicted RBP23.4■■□□□ 1.34
VCPKMT-203ENST00000484763 NOM1Q5C9Z4 860 aaKnown RBP23.4■■□□□ 1.34
VCPKMT-203ENST00000484763 SAPCD2Q86UD0 394 aa23.4■■□□□ 1.34
VCPKMT-203ENST00000484763 TEX2Q8IWB9 1127 aa23.4■■□□□ 1.34
VCPKMT-203ENST00000484763 CPXCR1Q8N123 301 aa23.4■■□□□ 1.34
VCPKMT-203ENST00000484763 SPATA32Q96LK8 384 aa23.4■■□□□ 1.34
VCPKMT-203ENST00000484763 AGBL1Q96MI9 1066 aa23.4■■□□□ 1.34
VCPKMT-203ENST00000484763 FTOQ9C0B1 505 aaKnown RBP eCLIP23.4■■□□□ 1.34
VCPKMT-203ENST00000484763 RAVER2Q9HCJ3 691 aaKnown RBP23.4■■□□□ 1.34
VCPKMT-203ENST00000484763 RTEL1Q9NZ71 1219 aa23.4■■□□□ 1.34
VCPKMT-203ENST00000484763 BIN2Q9UBW5 565 aaPredicted RBP23.4■■□□□ 1.34
VCPKMT-203ENST00000484763 CEBPZQ03701 1054 aaKnown RBP23.4■■□□□ 1.34
VCPKMT-203ENST00000484763 REPS2Q8NFH8 660 aa23.4■■□□□ 1.34
VCPKMT-203ENST00000484763 MS4A4AQ96JQ5 239 aa23.4■■□□□ 1.34
VCPKMT-203ENST00000484763 YY1P25490 414 aa23.39■■□□□ 1.33
VCPKMT-203ENST00000484763 TRAPPC10P48553 1259 aa23.39■■□□□ 1.33
VCPKMT-203ENST00000484763 CLK2P49760 499 aaKnown RBP23.39■■□□□ 1.33
VCPKMT-203ENST00000484763 TOB1P50616 345 aaPredicted RBP23.39■■□□□ 1.33
VCPKMT-203ENST00000484763 MKRN3Q13064 507 aaKnown RBP23.39■■□□□ 1.33
VCPKMT-203ENST00000484763 UBE2SQ16763 222 aa23.39■■□□□ 1.33
VCPKMT-203ENST00000484763 ANO1Q5XXA6 986 aa23.39■■□□□ 1.33
VCPKMT-203ENST00000484763 ELP1O95163 1332 aa23.39■■□□□ 1.33
VCPKMT-203ENST00000484763 OPLAHO14841 1288 aa23.38■■□□□ 1.33
VCPKMT-203ENST00000484763 PRPF40AO75400 957 aaKnown RBP23.38■■□□□ 1.33
VCPKMT-203ENST00000484763 NASPP49321 788 aaPredicted RBP23.38■■□□□ 1.33
VCPKMT-203ENST00000484763 NONOQ15233 471 aaKnown RBP eCLIP23.38■■□□□ 1.33
VCPKMT-203ENST00000484763 JAKMIP3Q5VZ66 844 aa23.38■■□□□ 1.33
VCPKMT-203ENST00000484763 GPAT2Q6NUI2 795 aa23.38■■□□□ 1.33
VCPKMT-203ENST00000484763 LEO1Q8WVC0 666 aaPredicted RBP23.38■■□□□ 1.33
VCPKMT-203ENST00000484763 ASCC2Q9H1I8 757 aaPredicted RBP23.38■■□□□ 1.33
VCPKMT-203ENST00000484763 CLIC4Q9Y696 253 aa23.38■■□□□ 1.33
VCPKMT-203ENST00000484763 CCL15-CCL14A0A0B4J2E2 113 aa23.38■■□□□ 1.33
VCPKMT-203ENST00000484763 ATP2A1O14983 1001 aa23.38■■□□□ 1.33
VCPKMT-203ENST00000484763 YEATS4O95619 227 aa23.38■■□□□ 1.33
VCPKMT-203ENST00000484763 OSBPP22059 807 aa23.38■■□□□ 1.33
VCPKMT-203ENST00000484763 ZNF157P51786 506 aaPredicted RBP23.38■■□□□ 1.33
VCPKMT-203ENST00000484763 CCL15Q16663 113 aa23.38■■□□□ 1.33
VCPKMT-203ENST00000484763 RASAL3Q86YV0 1011 aa23.38■■□□□ 1.33
VCPKMT-203ENST00000484763 MB21D1Q8N884 522 aa23.38■■□□□ 1.33
VCPKMT-203ENST00000484763 LMBRD1Q9NUN5 540 aa23.38■■□□□ 1.33
VCPKMT-203ENST00000484763 TMEM260Q9NX78 707 aa23.38■■□□□ 1.33
VCPKMT-203ENST00000484763 TLL2Q9Y6L7 1015 aa23.38■■□□□ 1.33
VCPKMT-203ENST00000484763 MEIS2O14770 477 aa23.37■■□□□ 1.33
VCPKMT-203ENST00000484763 SF3A1Q15459 793 aaKnown RBP23.37■■□□□ 1.33
VCPKMT-203ENST00000484763 MCTP2Q6DN12 878 aa23.37■■□□□ 1.33
VCPKMT-203ENST00000484763 RGMBQ6NW40 437 aa23.37■■□□□ 1.33
VCPKMT-203ENST00000484763 LBX2Q6XYB7 198 aa23.37■■□□□ 1.33
VCPKMT-203ENST00000484763 ZNF214Q9UL59 606 aaPredicted RBP23.37■■□□□ 1.33
VCPKMT-203ENST00000484763 PIK3CDO00329 1044 aa23.36■■□□□ 1.33
VCPKMT-203ENST00000484763 ALAS1P13196 640 aa23.36■■□□□ 1.33
VCPKMT-203ENST00000484763 FSTL1Q12841 308 aa23.36■■□□□ 1.33
VCPKMT-203ENST00000484763 AP3B2Q13367 1082 aa23.36■■□□□ 1.33
VCPKMT-203ENST00000484763 TMEM132BQ14DG7 1078 aa23.36■■□□□ 1.33
VCPKMT-203ENST00000484763 STK38Q15208 465 aa23.36■■□□□ 1.33
VCPKMT-203ENST00000484763 USP17L6PQ6QN14 398 aa23.36■■□□□ 1.33
VCPKMT-203ENST00000484763 P2RX7Q99572 595 aaKnown RBP23.36■■□□□ 1.33
VCPKMT-203ENST00000484763 RCOR1Q9UKL0 485 aa23.36■■□□□ 1.33
VCPKMT-203ENST00000484763 PNMA3Q9UL41 463 aa23.36■■□□□ 1.33
VCPKMT-203ENST00000484763 ATP2B1P20020 1258 aa23.36■■□□□ 1.33
VCPKMT-203ENST00000484763 HERVK_113P62684 666 aa23.36■■□□□ 1.33
VCPKMT-203ENST00000484763 NBR1Q14596 966 aa23.36■■□□□ 1.33
VCPKMT-203ENST00000484763 INF2Q27J81 1249 aa23.36■■□□□ 1.33
VCPKMT-203ENST00000484763 TTC38Q5R3I4 469 aa23.36■■□□□ 1.33
VCPKMT-203ENST00000484763 SNRNP48Q6IEG0 339 aaKnown RBP23.36■■□□□ 1.33
VCPKMT-203ENST00000484763 ZNF784Q8NCA9 323 aaPredicted RBP23.36■■□□□ 1.33
VCPKMT-203ENST00000484763 LINC00301Q8NCQ3 95 aa23.36■■□□□ 1.33
VCPKMT-203ENST00000484763 TEX13BQ9BXU2 312 aa23.36■■□□□ 1.33
VCPKMT-203ENST00000484763 SLC45A1Q9Y2W3 748 aa23.36■■□□□ 1.33
VCPKMT-203ENST00000484763 PCDHB6Q9Y5E3 794 aa23.36■■□□□ 1.33
VCPKMT-203ENST00000484763 KCNG4Q8TDN1 519 aa23.35■■□□□ 1.33
VCPKMT-203ENST00000484763 BRI3BPQ8WY22 251 aa23.35■■□□□ 1.33
VCPKMT-203ENST00000484763 CEP131Q9UPN4 1083 aa23.35■■□□□ 1.33
VCPKMT-203ENST00000484763 TMEM88BA6NKF7 163 aa23.34■■□□□ 1.33
VCPKMT-203ENST00000484763 GCOM1H8Y6P7 765 aaPredicted RBP23.34■■□□□ 1.33
VCPKMT-203ENST00000484763 CFBP00751 764 aa23.34■■□□□ 1.33
VCPKMT-203ENST00000484763 POLR2MP0CAP2 368 aa23.34■■□□□ 1.33
VCPKMT-203ENST00000484763 ANKRD23Q86SG2 305 aa23.34■■□□□ 1.33
VCPKMT-203ENST00000484763 MCF2L2Q86YR7 1114 aa23.34■■□□□ 1.33
VCPKMT-203ENST00000484763 TBCKQ8TEA7 893 aa23.34■■□□□ 1.33
VCPKMT-203ENST00000484763 PGBD1Q96JS3 809 aa23.34■■□□□ 1.33
VCPKMT-203ENST00000484763 HOMER2Q9NSB8 354 aa23.34■■□□□ 1.33
VCPKMT-203ENST00000484763 FOSP01100 380 aaPredicted RBP23.33■■□□□ 1.33
VCPKMT-203ENST00000484763 SLC39A14Q15043 492 aa23.33■■□□□ 1.33
VCPKMT-203ENST00000484763 CLEC4DQ8WXI8 215 aa23.33■■□□□ 1.33
VCPKMT-203ENST00000484763 TRERF1Q96PN7 1200 aa23.33■■□□□ 1.33
VCPKMT-203ENST00000484763 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms