RNA–Protein interactions for RNA: ENST00000482172.5

IFT88-206, Transcript of intraflagellar transport 88, humanhuman

TSL 3

Gene IFT88, Length 968 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-206ENST00000482172 NR5A1Q13285 461 aa14.33□□□□□ -0.12
IFT88-206ENST00000482172 CSPP1Q1MSJ5 1256 aa14.33□□□□□ -0.12
IFT88-206ENST00000482172 RILPL1Q5EBL4 403 aa14.33□□□□□ -0.12
IFT88-206ENST00000482172 GPAT2Q6NUI2 795 aa14.33□□□□□ -0.12
IFT88-206ENST00000482172 RGMBQ6NW40 437 aa14.33□□□□□ -0.12
IFT88-206ENST00000482172 CCDC174Q6PII3 467 aa14.33□□□□□ -0.12
IFT88-206ENST00000482172 KRT25Q7Z3Z0 450 aa14.33□□□□□ -0.12
IFT88-206ENST00000482172 MB21D1Q8N884 522 aa14.33□□□□□ -0.12
IFT88-206ENST00000482172 REPS2Q8NFH8 660 aa14.33□□□□□ -0.12
IFT88-206ENST00000482172 ATG4CQ96DT6 458 aa14.33□□□□□ -0.12
IFT88-206ENST00000482172 SCAND2PQ9GZW5 306 aaPredicted RBP14.33□□□□□ -0.12
IFT88-206ENST00000482172 MAF1Q9H063 256 aa14.33□□□□□ -0.12
IFT88-206ENST00000482172 PSTPIP2Q9H939 334 aa14.33□□□□□ -0.12
IFT88-206ENST00000482172 PCDHA6Q9UN73 950 aa14.33□□□□□ -0.12
IFT88-206ENST00000482172 PCDHA8Q9Y5H6 950 aa14.33□□□□□ -0.12
IFT88-206ENST00000482172 TESPA1A2RU30 521 aaPredicted RBP14.32□□□□□ -0.12
IFT88-206ENST00000482172 TMEM88BA6NKF7 163 aa14.32□□□□□ -0.12
IFT88-206ENST00000482172 PIK3CDO00329 1044 aa14.32□□□□□ -0.12
IFT88-206ENST00000482172 PTMSP20962 102 aa14.32□□□□□ -0.12
IFT88-206ENST00000482172 MCM4P33991 863 aa14.32□□□□□ -0.12
IFT88-206ENST00000482172 CLK2P49760 499 aaKnown RBP14.32□□□□□ -0.12
IFT88-206ENST00000482172 IRX3P78415 501 aaPredicted RBP14.32□□□□□ -0.12
IFT88-206ENST00000482172 USH1GQ495M9 461 aa14.32□□□□□ -0.12
IFT88-206ENST00000482172 FAM173BQ6P4H8 233 aa14.32□□□□□ -0.12
IFT88-206ENST00000482172 ANKRD23Q86SG2 305 aa14.32□□□□□ -0.12
IFT88-206ENST00000482172 REXO1Q8N1G1 1221 aaKnown RBP14.32□□□□□ -0.12
IFT88-206ENST00000482172 TMEM87AQ8NBN3 555 aa14.32□□□□□ -0.12
IFT88-206ENST00000482172 ZNF784Q8NCA9 323 aaPredicted RBP14.32□□□□□ -0.12
IFT88-206ENST00000482172 GTF3C2Q8WUA4 911 aaPredicted RBP14.32□□□□□ -0.12
IFT88-206ENST00000482172 POLR3EQ9NVU0 708 aa14.32□□□□□ -0.12
IFT88-206ENST00000482172 CCPG1Q9ULG6 757 aa14.32□□□□□ -0.12
IFT88-206ENST00000482172 NOL7Q9UMY1 257 aaKnown RBP14.32□□□□□ -0.12
IFT88-206ENST00000482172 MYH15Q9Y2K3 1946 aa14.32□□□□□ -0.12
IFT88-206ENST00000482172 CCDC194A0A1B0GVG4 234 aa14.31□□□□□ -0.12
IFT88-206ENST00000482172 DDX11L8A8MPP1 907 aa14.31□□□□□ -0.12
IFT88-206ENST00000482172 ZNF157P51786 506 aaPredicted RBP14.31□□□□□ -0.12
IFT88-206ENST00000482172 GHRHRQ02643 423 aa14.31□□□□□ -0.12
IFT88-206ENST00000482172 AP3B2Q13367 1082 aa14.31□□□□□ -0.12
IFT88-206ENST00000482172 TKFCQ3LXA3 575 aa14.31□□□□□ -0.12
IFT88-206ENST00000482172 RASAL3Q86YV0 1011 aa14.31□□□□□ -0.12
IFT88-206ENST00000482172 CCDC102AQ96A19 550 aa14.31□□□□□ -0.12
IFT88-206ENST00000482172 ASCC2Q9H1I8 757 aaPredicted RBP14.31□□□□□ -0.12
IFT88-206ENST00000482172 MAP3K20Q9NYL2 800 aaKnown RBP14.31□□□□□ -0.12
IFT88-206ENST00000482172 RTEL1Q9NZ71 1219 aa14.31□□□□□ -0.12
IFT88-206ENST00000482172 PNMA3Q9UL41 463 aa14.31□□□□□ -0.12
IFT88-206ENST00000482172 A0A0G2JMZ2 1700 aa14.3□□□□□ -0.12
IFT88-206ENST00000482172 CCL15-CCL14A0A0B4J2E2 113 aa14.3□□□□□ -0.12
IFT88-206ENST00000482172 MANSC4A6NHS7 340 aaPredicted RBP14.3□□□□□ -0.12
IFT88-206ENST00000482172 ADAMTS3O15072 1205 aa14.3□□□□□ -0.12
IFT88-206ENST00000482172 YEATS4O95619 227 aa14.3□□□□□ -0.12
IFT88-206ENST00000482172 FOSP01100 380 aaPredicted RBP14.3□□□□□ -0.12
IFT88-206ENST00000482172 SLC10A3P09131 477 aa14.3□□□□□ -0.12
IFT88-206ENST00000482172 NASPP49321 788 aaPredicted RBP14.3□□□□□ -0.12
IFT88-206ENST00000482172 NONOQ15233 471 aaKnown RBP eCLIP14.3□□□□□ -0.12
IFT88-206ENST00000482172 NFKBIBQ15653 356 aa14.3□□□□□ -0.12
IFT88-206ENST00000482172 CCL15Q16663 113 aa14.3□□□□□ -0.12
IFT88-206ENST00000482172 FOXD4L6Q3SYB3 417 aaPredicted RBP14.3□□□□□ -0.12
IFT88-206ENST00000482172 FOXD4L3Q6VB84 417 aaPredicted RBP14.3□□□□□ -0.12
IFT88-206ENST00000482172 PIK3AP1Q6ZUJ8 805 aa14.3□□□□□ -0.12
IFT88-206ENST00000482172 MCF2L2Q86YR7 1114 aa14.3□□□□□ -0.12
IFT88-206ENST00000482172 CPXCR1Q8N123 301 aa14.3□□□□□ -0.12
IFT88-206ENST00000482172 BRI3BPQ8WY22 251 aa14.3□□□□□ -0.12
IFT88-206ENST00000482172 AGBL1Q96MI9 1066 aa14.3□□□□□ -0.12
IFT88-206ENST00000482172 USP28Q96RU2 1077 aa14.3□□□□□ -0.12
IFT88-206ENST00000482172 P2RX7Q99572 595 aaKnown RBP14.3□□□□□ -0.12
IFT88-206ENST00000482172 RAVER2Q9HCJ3 691 aaKnown RBP14.3□□□□□ -0.12
IFT88-206ENST00000482172 ZCCHC17Q9NP64 241 aaKnown RBP14.3□□□□□ -0.12
IFT88-206ENST00000482172 RCOR1Q9UKL0 485 aa14.3□□□□□ -0.12
IFT88-206ENST00000482172 ZNF214Q9UL59 606 aaPredicted RBP14.3□□□□□ -0.12
IFT88-206ENST00000482172 CNPY2Q9Y2B0 182 aa14.3□□□□□ -0.12
IFT88-206ENST00000482172 MORC2Q9Y6X9 1032 aaPredicted RBP14.3□□□□□ -0.12
IFT88-206ENST00000482172 ELP1O95163 1332 aa14.3□□□□□ -0.12
IFT88-206ENST00000482172 MEIS2O14770 477 aa14.29□□□□□ -0.12
IFT88-206ENST00000482172 OPLAHO14841 1288 aa14.29□□□□□ -0.12
IFT88-206ENST00000482172 NCLP19338 710 aaKnown RBP14.29□□□□□ -0.12
IFT88-206ENST00000482172 TOB1P50616 345 aaPredicted RBP14.29□□□□□ -0.12
IFT88-206ENST00000482172 INHBEP58166 350 aa14.29□□□□□ -0.12
IFT88-206ENST00000482172 HERVK_113P62684 666 aa14.29□□□□□ -0.12
IFT88-206ENST00000482172 TMEM132BQ14DG7 1078 aa14.29□□□□□ -0.12
IFT88-206ENST00000482172 EARS2Q5JPH6 523 aaKnown RBP14.29□□□□□ -0.12
IFT88-206ENST00000482172 ANO1Q5XXA6 986 aa14.29□□□□□ -0.12
IFT88-206ENST00000482172 TEX13BQ9BXU2 312 aa14.29□□□□□ -0.12
IFT88-206ENST00000482172 TFIP11Q9UBB9 837 aaKnown RBP14.29□□□□□ -0.12
IFT88-206ENST00000482172 BIN2Q9UBW5 565 aaPredicted RBP14.29□□□□□ -0.12
IFT88-206ENST00000482172 BTBD19C9JJ37 291 aa14.28□□□□□ -0.12
IFT88-206ENST00000482172 GCOM1H8Y6P7 765 aaPredicted RBP14.28□□□□□ -0.12
IFT88-206ENST00000482172 BMP15O95972 392 aa14.28□□□□□ -0.12
IFT88-206ENST00000482172 POLR2MP0CAP2 368 aa14.28□□□□□ -0.12
IFT88-206ENST00000482172 ALAS1P13196 640 aa14.28□□□□□ -0.12
IFT88-206ENST00000482172 COPB2P35606 906 aa14.28□□□□□ -0.12
IFT88-206ENST00000482172 STAT3P40763 770 aa14.28□□□□□ -0.12
IFT88-206ENST00000482172 ORC2Q13416 577 aaPredicted RBP14.28□□□□□ -0.12
IFT88-206ENST00000482172 RIOX2Q8IUF8 465 aa14.28□□□□□ -0.12
IFT88-206ENST00000482172 RASGRP4Q8TDF6 673 aa14.28□□□□□ -0.12
IFT88-206ENST00000482172 LEO1Q8WVC0 666 aaPredicted RBP14.28□□□□□ -0.12
IFT88-206ENST00000482172 CLEC4DQ8WXI8 215 aa14.28□□□□□ -0.12
IFT88-206ENST00000482172 CHAMP1Q96JM3 812 aa14.28□□□□□ -0.12
IFT88-206ENST00000482172 SPATA32Q96LK8 384 aa14.28□□□□□ -0.12
IFT88-206ENST00000482172 TRERF1Q96PN7 1200 aa14.28□□□□□ -0.12
IFT88-206ENST00000482172 CEP131Q9UPN4 1083 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms