RNA–Protein interactions for RNA: ENST00000480222.1

SIK3-209, Transcript of SIK family kinase 3, humanhuman

TSL 3

Gene SIK3, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-209ENST00000480222 OXER1Q8TDS5 423 aa14.42□□□□□ -0.1
SIK3-209ENST00000480222 GTF3C2Q8WUA4 911 aaPredicted RBP14.42□□□□□ -0.1
SIK3-209ENST00000480222 ATG4CQ96DT6 458 aa14.42□□□□□ -0.1
SIK3-209ENST00000480222 HHIPL1Q96JK4 782 aa14.42□□□□□ -0.1
SIK3-209ENST00000480222 SCAND2PQ9GZW5 306 aaPredicted RBP14.42□□□□□ -0.1
SIK3-209ENST00000480222 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.42□□□□□ -0.1
SIK3-209ENST00000480222 PNMA3Q9UL41 463 aa14.42□□□□□ -0.1
SIK3-209ENST00000480222 CCPG1Q9ULG6 757 aa14.42□□□□□ -0.1
SIK3-209ENST00000480222 NOL7Q9UMY1 257 aaKnown RBP14.42□□□□□ -0.1
SIK3-209ENST00000480222 MRPL11Q9Y3B7 192 aaKnown RBP14.42□□□□□ -0.1
SIK3-209ENST00000480222 TLL2Q9Y6L7 1015 aa14.42□□□□□ -0.1
SIK3-209ENST00000480222 ZNF536O15090 1300 aa14.41□□□□□ -0.1
SIK3-209ENST00000480222 CCDC194A0A1B0GVG4 234 aa14.41□□□□□ -0.1
SIK3-209ENST00000480222 OSBPP22059 807 aa14.41□□□□□ -0.1
SIK3-209ENST00000480222 AP3B2Q13367 1082 aa14.41□□□□□ -0.1
SIK3-209ENST00000480222 RASAL3Q86YV0 1011 aa14.41□□□□□ -0.1
SIK3-209ENST00000480222 REPS2Q8NFH8 660 aa14.41□□□□□ -0.1
SIK3-209ENST00000480222 TEX13BQ9BXU2 312 aa14.41□□□□□ -0.1
SIK3-209ENST00000480222 MAF1Q9H063 256 aa14.41□□□□□ -0.1
SIK3-209ENST00000480222 PSTPIP2Q9H939 334 aa14.41□□□□□ -0.1
SIK3-209ENST00000480222 POLR3EQ9NVU0 708 aa14.41□□□□□ -0.1
SIK3-209ENST00000480222 TCHHQ07283 1943 aa14.41□□□□□ -0.1
SIK3-209ENST00000480222 ELP1O95163 1332 aa14.41□□□□□ -0.1
SIK3-209ENST00000480222 CCL15-CCL14A0A0B4J2E2 113 aa14.4□□□□□ -0.1
SIK3-209ENST00000480222 TMEM88BA6NKF7 163 aa14.4□□□□□ -0.1
SIK3-209ENST00000480222 PIK3CDO00329 1044 aa14.4□□□□□ -0.1
SIK3-209ENST00000480222 NCLP19338 710 aaKnown RBP14.4□□□□□ -0.1
SIK3-209ENST00000480222 MCM4P33991 863 aa14.4□□□□□ -0.1
SIK3-209ENST00000480222 CLK2P49760 499 aaKnown RBP14.4□□□□□ -0.1
SIK3-209ENST00000480222 SNAP25P60880 206 aa14.4□□□□□ -0.1
SIK3-209ENST00000480222 CCL15Q16663 113 aa14.4□□□□□ -0.1
SIK3-209ENST00000480222 TKFCQ3LXA3 575 aa14.4□□□□□ -0.1
SIK3-209ENST00000480222 RGMBQ6NW40 437 aa14.4□□□□□ -0.1
SIK3-209ENST00000480222 SAMD1Q6SPF0 538 aaPredicted RBP14.4□□□□□ -0.1
SIK3-209ENST00000480222 ANKRD23Q86SG2 305 aa14.4□□□□□ -0.1
SIK3-209ENST00000480222 SAMD3Q8N6K7 520 aa14.4□□□□□ -0.1
SIK3-209ENST00000480222 MS4A4AQ96JQ5 239 aa14.4□□□□□ -0.1
SIK3-209ENST00000480222 PCDHA6Q9UN73 950 aa14.4□□□□□ -0.1
SIK3-209ENST00000480222 PCDHA8Q9Y5H6 950 aa14.4□□□□□ -0.1
SIK3-209ENST00000480222 FIBPO43427 364 aa14.39□□□□□ -0.11
SIK3-209ENST00000480222 YEATS4O95619 227 aa14.39□□□□□ -0.11
SIK3-209ENST00000480222 BMP15O95972 392 aa14.39□□□□□ -0.11
SIK3-209ENST00000480222 SLC10A3P09131 477 aa14.39□□□□□ -0.11
SIK3-209ENST00000480222 NASPP49321 788 aaPredicted RBP14.39□□□□□ -0.11
SIK3-209ENST00000480222 ZNF157P51786 506 aaPredicted RBP14.39□□□□□ -0.11
SIK3-209ENST00000480222 HERVK_113P62684 666 aa14.39□□□□□ -0.11
SIK3-209ENST00000480222 GHRHRQ02643 423 aa14.39□□□□□ -0.11
SIK3-209ENST00000480222 NONOQ15233 471 aaKnown RBP eCLIP14.39□□□□□ -0.11
SIK3-209ENST00000480222 FOXD4L6Q3SYB3 417 aaPredicted RBP14.39□□□□□ -0.11
SIK3-209ENST00000480222 GPAT2Q6NUI2 795 aa14.39□□□□□ -0.11
SIK3-209ENST00000480222 FAM173BQ6P4H8 233 aa14.39□□□□□ -0.11
SIK3-209ENST00000480222 FOXD4L3Q6VB84 417 aaPredicted RBP14.39□□□□□ -0.11
SIK3-209ENST00000480222 TNS4Q8IZW8 715 aa14.39□□□□□ -0.11
SIK3-209ENST00000480222 USP28Q96RU2 1077 aa14.39□□□□□ -0.11
SIK3-209ENST00000480222 ASCC2Q9H1I8 757 aaPredicted RBP14.39□□□□□ -0.11
SIK3-209ENST00000480222 ZCCHC17Q9NP64 241 aaKnown RBP14.39□□□□□ -0.11
SIK3-209ENST00000480222 MAP3K20Q9NYL2 800 aaKnown RBP14.39□□□□□ -0.11
SIK3-209ENST00000480222 RTEL1Q9NZ71 1219 aa14.39□□□□□ -0.11
SIK3-209ENST00000480222 ZNF214Q9UL59 606 aaPredicted RBP14.39□□□□□ -0.11
SIK3-209ENST00000480222 CNPY2Q9Y2B0 182 aa14.39□□□□□ -0.11
SIK3-209ENST00000480222 MORC2Q9Y6X9 1032 aaPredicted RBP14.39□□□□□ -0.11
SIK3-209ENST00000480222 TESPA1A2RU30 521 aaPredicted RBP14.38□□□□□ -0.11
SIK3-209ENST00000480222 MANSC4A6NHS7 340 aaPredicted RBP14.38□□□□□ -0.11
SIK3-209ENST00000480222 CAPN15O75808 1086 aa14.38□□□□□ -0.11
SIK3-209ENST00000480222 FOSP01100 380 aaPredicted RBP14.38□□□□□ -0.11
SIK3-209ENST00000480222 HSPA1AP0DMV8 641 aaKnown RBP14.38□□□□□ -0.11
SIK3-209ENST00000480222 HSPA1BP0DMV9 641 aaKnown RBP14.38□□□□□ -0.11
SIK3-209ENST00000480222 COPB2P35606 906 aa14.38□□□□□ -0.11
SIK3-209ENST00000480222 ORC2Q13416 577 aaPredicted RBP14.38□□□□□ -0.11
SIK3-209ENST00000480222 NFKBIBQ15653 356 aa14.38□□□□□ -0.11
SIK3-209ENST00000480222 PIK3AP1Q6ZUJ8 805 aa14.38□□□□□ -0.11
SIK3-209ENST00000480222 MCF2L2Q86YR7 1114 aa14.38□□□□□ -0.11
SIK3-209ENST00000480222 KCNG4Q8TDN1 519 aa14.38□□□□□ -0.11
SIK3-209ENST00000480222 BRI3BPQ8WY22 251 aa14.38□□□□□ -0.11
SIK3-209ENST00000480222 CCDC102AQ96A19 550 aa14.38□□□□□ -0.11
SIK3-209ENST00000480222 AGBL1Q96MI9 1066 aa14.38□□□□□ -0.11
SIK3-209ENST00000480222 RAVER2Q9HCJ3 691 aaKnown RBP14.38□□□□□ -0.11
SIK3-209ENST00000480222 CEP131Q9UPN4 1083 aa14.38□□□□□ -0.11
SIK3-209ENST00000480222 SPDYE3A6NKU9 549 aa14.37□□□□□ -0.11
SIK3-209ENST00000480222 OPLAHO14841 1288 aa14.37□□□□□ -0.11
SIK3-209ENST00000480222 TMEM132BQ14DG7 1078 aa14.37□□□□□ -0.11
SIK3-209ENST00000480222 ANO1Q5XXA6 986 aa14.37□□□□□ -0.11
SIK3-209ENST00000480222 SNRNP48Q6IEG0 339 aaKnown RBP14.37□□□□□ -0.11
SIK3-209ENST00000480222 CPXCR1Q8N123 301 aa14.37□□□□□ -0.11
SIK3-209ENST00000480222 RASGRP4Q8TDF6 673 aa14.37□□□□□ -0.11
SIK3-209ENST00000480222 LEO1Q8WVC0 666 aaPredicted RBP14.37□□□□□ -0.11
SIK3-209ENST00000480222 SPATA32Q96LK8 384 aa14.37□□□□□ -0.11
SIK3-209ENST00000480222 PARK7Q99497 189 aaKnown RBP14.37□□□□□ -0.11
SIK3-209ENST00000480222 ABT1Q9ULW3 272 aaKnown RBP14.37□□□□□ -0.11
SIK3-209ENST00000480222 FAM205CA6NFA0 338 aa14.36□□□□□ -0.11
SIK3-209ENST00000480222 BTBD19C9JJ37 291 aa14.36□□□□□ -0.11
SIK3-209ENST00000480222 GCOM1H8Y6P7 765 aaPredicted RBP14.36□□□□□ -0.11
SIK3-209ENST00000480222 MEIS2O14770 477 aa14.36□□□□□ -0.11
SIK3-209ENST00000480222 POLR2MP0CAP2 368 aa14.36□□□□□ -0.11
SIK3-209ENST00000480222 ALAS1P13196 640 aa14.36□□□□□ -0.11
SIK3-209ENST00000480222 TOB1P50616 345 aaPredicted RBP14.36□□□□□ -0.11
SIK3-209ENST00000480222 UBE2SQ16763 222 aa14.36□□□□□ -0.11
SIK3-209ENST00000480222 EARS2Q5JPH6 523 aaKnown RBP14.36□□□□□ -0.11
SIK3-209ENST00000480222 TTC38Q5R3I4 469 aa14.36□□□□□ -0.11
SIK3-209ENST00000480222 JAKMIP3Q5VZ66 844 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms