RNA–Protein interactions for RNA: ENST00000480102.1

PTCD3-213, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-213ENST00000480102 CTCFP49711 727 aaPredicted RBP5.94□□□□□ -1.46
PTCD3-213ENST00000480102 MECOMQ03112 1051 aa5.94□□□□□ -1.46
PTCD3-213ENST00000480102 MAP3K12Q12852 859 aa5.94□□□□□ -1.46
PTCD3-213ENST00000480102 DGKZQ13574 1117 aa5.94□□□□□ -1.46
PTCD3-213ENST00000480102 UBE3CQ15386 1083 aa5.94□□□□□ -1.46
PTCD3-213ENST00000480102 GRIK5Q16478 980 aa5.94□□□□□ -1.46
PTCD3-213ENST00000480102 LRRFIP1Q32MZ4 808 aaKnown RBP5.94□□□□□ -1.46
PTCD3-213ENST00000480102 TTC39AQ5SRH9 613 aa5.94□□□□□ -1.46
PTCD3-213ENST00000480102 CHSY3Q70JA7 882 aa5.94□□□□□ -1.46
PTCD3-213ENST00000480102 ERO1BQ86YB8 467 aa5.94□□□□□ -1.46
PTCD3-213ENST00000480102 DZIP1Q86YF9 867 aaKnown RBP5.94□□□□□ -1.46
PTCD3-213ENST00000480102 SMC5Q8IY18 1101 aa5.94□□□□□ -1.46
PTCD3-213ENST00000480102 ZNF384Q8TF68 577 aa5.94□□□□□ -1.46
PTCD3-213ENST00000480102 PRIMPOLQ96LW4 560 aa5.94□□□□□ -1.46
PTCD3-213ENST00000480102 NEUROD6Q96NK8 337 aa5.94□□□□□ -1.46
PTCD3-213ENST00000480102 DBNDD2Q9BQY9 259 aa5.94□□□□□ -1.46
PTCD3-213ENST00000480102 TRAIPQ9BWF2 469 aa5.94□□□□□ -1.46
PTCD3-213ENST00000480102 EHD4Q9H223 541 aa5.94□□□□□ -1.46
PTCD3-213ENST00000480102 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.94□□□□□ -1.46
PTCD3-213ENST00000480102 KLK14Q9P0G3 267 aa5.94□□□□□ -1.46
PTCD3-213ENST00000480102 DMGDHQ9UI17 866 aaKnown RBP5.94□□□□□ -1.46
PTCD3-213ENST00000480102 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.94□□□□□ -1.46
PTCD3-213ENST00000480102 ASTN2O75129 1339 aaPredicted RBP5.94□□□□□ -1.46
PTCD3-213ENST00000480102 CACNA1SQ13698 1873 aa5.94□□□□□ -1.46
PTCD3-213ENST00000480102 SSC5DA1L4H1 1573 aa5.93□□□□□ -1.46
PTCD3-213ENST00000480102 ZNF646O15015 1829 aaPredicted RBP5.93□□□□□ -1.46
PTCD3-213ENST00000480102 MANSC4A6NHS7 340 aaPredicted RBP5.93□□□□□ -1.46
PTCD3-213ENST00000480102 CXCL11O14625 94 aa5.93□□□□□ -1.46
PTCD3-213ENST00000480102 USP2O75604 605 aaPredicted RBP5.93□□□□□ -1.46
PTCD3-213ENST00000480102 GDF11O95390 407 aa5.93□□□□□ -1.46
PTCD3-213ENST00000480102 ZFYP08048 801 aaPredicted RBP5.93□□□□□ -1.46
PTCD3-213ENST00000480102 IFIT2P09913 472 aaKnown RBP5.93□□□□□ -1.46
PTCD3-213ENST00000480102 ZNF157P51786 506 aaPredicted RBP5.93□□□□□ -1.46
PTCD3-213ENST00000480102 RBM5P52756 815 aaKnown RBP eCLIP5.93□□□□□ -1.46
PTCD3-213ENST00000480102 PPATQ06203 517 aa5.93□□□□□ -1.46
PTCD3-213ENST00000480102 CHAF1AQ13111 956 aaPredicted RBP5.93□□□□□ -1.46
PTCD3-213ENST00000480102 ZSCAN25Q6NSZ9 544 aa5.93□□□□□ -1.46
PTCD3-213ENST00000480102 AACSQ86V21 672 aa5.93□□□□□ -1.46
PTCD3-213ENST00000480102 RASAL3Q86YV0 1011 aa5.93□□□□□ -1.46
PTCD3-213ENST00000480102 FOXP4Q8IVH2 680 aaPredicted RBP5.93□□□□□ -1.46
PTCD3-213ENST00000480102 TMEM151AQ8N4L1 468 aa5.93□□□□□ -1.46
PTCD3-213ENST00000480102 CLP1Q92989 425 aaKnown RBP5.93□□□□□ -1.46
PTCD3-213ENST00000480102 TNFRSF25Q93038 417 aa5.93□□□□□ -1.46
PTCD3-213ENST00000480102 GPATCH3Q96I76 525 aa5.93□□□□□ -1.46
PTCD3-213ENST00000480102 BTBD6Q96KE9 485 aa5.93□□□□□ -1.46
PTCD3-213ENST00000480102 MDFIQ99750 246 aa5.93□□□□□ -1.46
PTCD3-213ENST00000480102 HAUS7Q99871 368 aa5.93□□□□□ -1.46
PTCD3-213ENST00000480102 TDRD3Q9H7E2 651 aaKnown RBP5.93□□□□□ -1.46
PTCD3-213ENST00000480102 ECHDC1Q9NTX5 307 aa5.93□□□□□ -1.46
PTCD3-213ENST00000480102 CXXC1Q9P0U4 656 aaPredicted RBP5.93□□□□□ -1.46
PTCD3-213ENST00000480102 LRP2BPQ9P2M1 347 aa5.93□□□□□ -1.46
PTCD3-213ENST00000480102 STAP2Q9UGK3 403 aa5.93□□□□□ -1.46
PTCD3-213ENST00000480102 MKL2Q9ULH7 1088 aa5.93□□□□□ -1.46
PTCD3-213ENST00000480102 EXOC6BQ9Y2D4 811 aa5.93□□□□□ -1.46
PTCD3-213ENST00000480102 SLC45A1Q9Y2W3 748 aa5.93□□□□□ -1.46
PTCD3-213ENST00000480102 AOX1Q06278 1338 aa5.93□□□□□ -1.46
PTCD3-213ENST00000480102 SALL3Q9BXA9 1300 aa5.93□□□□□ -1.46
PTCD3-213ENST00000480102 ELOA3CA0A087WX78 387 aaPredicted RBP5.92□□□□□ -1.46
PTCD3-213ENST00000480102 CLRN2A0PK11 232 aa5.92□□□□□ -1.46
PTCD3-213ENST00000480102 ELOA3DA6NLF2 546 aaPredicted RBP5.92□□□□□ -1.46
PTCD3-213ENST00000480102 ERC2O15083 957 aa5.92□□□□□ -1.46
PTCD3-213ENST00000480102 CTNND1O60716 968 aaKnown RBP5.92□□□□□ -1.46
PTCD3-213ENST00000480102 GLRX3O76003 335 aaKnown RBP5.92□□□□□ -1.46
PTCD3-213ENST00000480102 HSPA1AP0DMV8 641 aaKnown RBP5.92□□□□□ -1.46
PTCD3-213ENST00000480102 HSPA1BP0DMV9 641 aaKnown RBP5.92□□□□□ -1.46
PTCD3-213ENST00000480102 BTDP43251 543 aa5.92□□□□□ -1.46
PTCD3-213ENST00000480102 DGKGP49619 791 aa5.92□□□□□ -1.46
PTCD3-213ENST00000480102 GTF2A2P52657 109 aa5.92□□□□□ -1.46
PTCD3-213ENST00000480102 PPIL2Q13356 520 aa5.92□□□□□ -1.46
PTCD3-213ENST00000480102 C11orf91Q3C1V1 193 aa5.92□□□□□ -1.46
PTCD3-213ENST00000480102 ELOA3BQ3SY89 546 aa5.92□□□□□ -1.46
PTCD3-213ENST00000480102 NBPF12Q5TAG4 269 aaPredicted RBP5.92□□□□□ -1.46
PTCD3-213ENST00000480102 NAA16Q6N069 864 aaPredicted RBP5.92□□□□□ -1.46
PTCD3-213ENST00000480102 CYP4F22Q6NT55 531 aa5.92□□□□□ -1.46
PTCD3-213ENST00000480102 GIMAP6Q6P9H5 292 aa5.92□□□□□ -1.46
PTCD3-213ENST00000480102 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.92□□□□□ -1.46
PTCD3-213ENST00000480102 RAB44Q7Z6P3 723 aaPredicted RBP5.92□□□□□ -1.46
PTCD3-213ENST00000480102 ELOA3Q8NG57 546 aa5.92□□□□□ -1.46
PTCD3-213ENST00000480102 COL26A1Q96A83 441 aa5.92□□□□□ -1.46
PTCD3-213ENST00000480102 CSRNP1Q96S65 589 aa5.92□□□□□ -1.46
PTCD3-213ENST00000480102 RIOK1Q9BRS2 568 aaKnown RBP5.92□□□□□ -1.46
PTCD3-213ENST00000480102 NOL10Q9BSC4 688 aaKnown RBP5.92□□□□□ -1.46
PTCD3-213ENST00000480102 ZNF341Q9BYN7 854 aa5.92□□□□□ -1.46
PTCD3-213ENST00000480102 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.92□□□□□ -1.463e-7■■■□□ 15.4
PTCD3-213ENST00000480102 OSBPL5Q9H0X9 879 aaPredicted RBP5.92□□□□□ -1.46
PTCD3-213ENST00000480102 RWDD1Q9H446 243 aaPredicted RBP5.92□□□□□ -1.46
PTCD3-213ENST00000480102 USP40Q9NVE5 1235 aa5.92□□□□□ -1.46
PTCD3-213ENST00000480102 PI4KBQ9UBF8 816 aa5.92□□□□□ -1.46
PTCD3-213ENST00000480102 ABCF2Q9UG63 623 aa5.92□□□□□ -1.46
PTCD3-213ENST00000480102 LRFN2Q9ULH4 789 aa5.92□□□□□ -1.46
PTCD3-213ENST00000480102 ARAP2Q8WZ64 1704 aa5.91□□□□□ -1.46
PTCD3-213ENST00000480102 A0A1B0GUL6 1792 aa5.91□□□□□ -1.46
PTCD3-213ENST00000480102 TCRBV5S4A2TA0A5A2 114 aa5.91□□□□□ -1.46
PTCD3-213ENST00000480102 ADARB2-AS1A8MUL3 147 aa5.91□□□□□ -1.46
PTCD3-213ENST00000480102 F8W031 263 aaPredicted RBP5.91□□□□□ -1.46
PTCD3-213ENST00000480102 EPB42P16452 691 aa5.91□□□□□ -1.46
PTCD3-213ENST00000480102 CAPN2P17655 700 aa5.91□□□□□ -1.46
PTCD3-213ENST00000480102 ZAP70P43403 619 aa5.91□□□□□ -1.46
PTCD3-213ENST00000480102 RGS3P49796 1198 aa5.91□□□□□ -1.46
PTCD3-213ENST00000480102 IDH3AP50213 366 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms