RNA–Protein interactions for RNA: ENST00000479510.2

SYNGAP1-206, Transcript of synaptic Ras GTPase activating protein 1, human

TSL 2

Gene SYNGAP1, Length 2,073 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SYNGAP1-206	ENST00000479510	P2RX5	Q93086	422 aa		27.59	■■■□□ 2.01
SYNGAP1-206	ENST00000479510	CHP1	Q99653	195 aa		27.59	■■■□□ 2.01
SYNGAP1-206	ENST00000479510	EXOC1	Q9NV70	894 aa		27.59	■■■□□ 2.01
SYNGAP1-206	ENST00000479510	SBF2	Q86WG5	1849 aa		27.59	■■■□□ 2.01
SYNGAP1-206	ENST00000479510	ESYT2	A0FGR8	921 aa		27.58	■■■□□ 2.01
SYNGAP1-206	ENST00000479510	hCG_1984214	I3L0E3	225 aa		27.58	■■■□□ 2.01
SYNGAP1-206	ENST00000479510	GNPAT	O15228	680 aa		27.58	■■■□□ 2.01
SYNGAP1-206	ENST00000479510	PLCG2	P16885	1265 aa		27.58	■■■□□ 2.01
SYNGAP1-206	ENST00000479510	C16orf86	Q6ZW13	317 aa		27.58	■■■□□ 2.01
SYNGAP1-206	ENST00000479510	CSGALNACT2	Q8N6G5	542 aa		27.58	■■■□□ 2.01
SYNGAP1-206	ENST00000479510	ZNF713	Q8N859	430 aa	Predicted RBP	27.58	■■■□□ 2.01
SYNGAP1-206	ENST00000479510	TRIM9	Q9C026	710 aa		27.58	■■■□□ 2.01
SYNGAP1-206	ENST00000479510	ZSWIM4	Q9H7M6	989 aa		27.58	■■■□□ 2.01
SYNGAP1-206	ENST00000479510	STX8	Q9UNK0	236 aa		27.58	■■■□□ 2.01
SYNGAP1-206	ENST00000479510	JAG2	Q9Y219	1238 aa		27.58	■■■□□ 2.01
SYNGAP1-206	ENST00000479510	PLCG1	P19174	1290 aa		27.58	■■■□□ 2.01
SYNGAP1-206	ENST00000479510	NAPA	P54920	295 aa		27.58	■■■□□ 2.01
SYNGAP1-206	ENST00000479510	FIGN	Q5HY92	759 aa		27.58	■■■□□ 2.01
SYNGAP1-206	ENST00000479510	CCDC170	Q8IYT3	715 aa		27.58	■■■□□ 2.01
SYNGAP1-206	ENST00000479510	DUSP9	Q99956	384 aa	Known RBP	27.58	■■■□□ 2.01
SYNGAP1-206	ENST00000479510	TTYH3	Q9C0H2	523 aa		27.58	■■■□□ 2.01
SYNGAP1-206	ENST00000479510	CALCOCO1	Q9P1Z2	691 aa		27.58	■■■□□ 2.01
SYNGAP1-206	ENST00000479510	CDK17	Q00537	523 aa		27.57	■■■□□ 2
SYNGAP1-206	ENST00000479510	NEK8	Q86SG6	692 aa		27.57	■■■□□ 2
SYNGAP1-206	ENST00000479510	RRP36	Q96EU6	259 aa	Known RBP	27.57	■■■□□ 2
SYNGAP1-206	ENST00000479510	TUBGCP2	Q9BSJ2	902 aa		27.57	■■■□□ 2
SYNGAP1-206	ENST00000479510	RTFDC1	Q9BY42	306 aa	Predicted RBP	27.57	■■■□□ 2
SYNGAP1-206	ENST00000479510	ZNHIT6	Q9NWK9	470 aa	Known RBP	27.57	■■■□□ 2
SYNGAP1-206	ENST00000479510	CYLC1	P35663	651 aa	Predicted RBP	27.56	■■■□□ 2
SYNGAP1-206	ENST00000479510	TRAPPC11	Q7Z392	1133 aa		27.56	■■■□□ 2
SYNGAP1-206	ENST00000479510		A0A1W2PQJ5	194 aa		27.56	■■■□□ 2
SYNGAP1-206	ENST00000479510	POLR3G	O15318	223 aa	Predicted RBP	27.56	■■■□□ 2
SYNGAP1-206	ENST00000479510	NOV	P48745	357 aa		27.56	■■■□□ 2
SYNGAP1-206	ENST00000479510	KCNQ4	P56696	695 aa		27.56	■■■□□ 2
SYNGAP1-206	ENST00000479510	ZBED6	P86452	979 aa		27.56	■■■□□ 2
SYNGAP1-206	ENST00000479510	DIXDC1	Q155Q3	683 aa		27.56	■■■□□ 2
SYNGAP1-206	ENST00000479510	WDR59	Q6PJI9	974 aa		27.56	■■■□□ 2
SYNGAP1-206	ENST00000479510	TXLNB	Q8N3L3	684 aa		27.56	■■■□□ 2
SYNGAP1-206	ENST00000479510	SNED1	Q8TER0	1413 aa		27.55	■■■□□ 2
SYNGAP1-206	ENST00000479510	EIF3J	O75822	258 aa	Known RBP	27.55	■■■□□ 2
SYNGAP1-206	ENST00000479510	TXNRD1	Q16881	649 aa		27.55	■■■□□ 2
SYNGAP1-206	ENST00000479510	SLC4A8	Q2Y0W8	1093 aa		27.55	■■■□□ 2
SYNGAP1-206	ENST00000479510	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	27.55	■■■□□ 2
SYNGAP1-206	ENST00000479510	RPGRIP1	Q96KN7	1286 aa		27.55	■■■□□ 2
SYNGAP1-206	ENST00000479510	PNKP	Q96T60	521 aa		27.55	■■■□□ 2
SYNGAP1-206	ENST00000479510	EYA3	Q99504	573 aa		27.55	■■■□□ 2
SYNGAP1-206	ENST00000479510	SEC63	Q9UGP8	760 aa	Known RBP	27.55	■■■□□ 2
SYNGAP1-206	ENST00000479510	TNRC6C	Q9HCJ0	1690 aa	Known RBP	27.55	■■■□□ 2
SYNGAP1-206	ENST00000479510	GPR75-ASB3	A0A0A6YYF3	556 aa		27.55	■■■□□ 2
SYNGAP1-206	ENST00000479510	SMCO2	A6NFE2	343 aa		27.55	■■■□□ 2
SYNGAP1-206	ENST00000479510	ABL1	P00519	1130 aa		27.55	■■■□□ 2
SYNGAP1-206	ENST00000479510	CDK8	P49336	464 aa		27.55	■■■□□ 2
SYNGAP1-206	ENST00000479510	FAM98C	Q17RN3	349 aa	Known RBP	27.55	■■■□□ 2
SYNGAP1-206	ENST00000479510	SOGA3	Q5TF21	947 aa		27.55	■■■□□ 2
SYNGAP1-206	ENST00000479510	WDR93	Q6P2C0	686 aa		27.55	■■■□□ 2
SYNGAP1-206	ENST00000479510	CNNM4	Q6P4Q7	775 aa		27.55	■■■□□ 2
SYNGAP1-206	ENST00000479510	PSD3	Q9NYI0	1048 aa		27.55	■■■□□ 2
SYNGAP1-206	ENST00000479510	L1RE1	Q9UN81	338 aa		27.55	■■■□□ 2
SYNGAP1-206	ENST00000479510	MYH1	P12882	1939 aa		27.54	■■■□□ 2
SYNGAP1-206	ENST00000479510	NUTM2B	A6NNL0	878 aa	Predicted RBP	27.54	■■■□□ 2
SYNGAP1-206	ENST00000479510	NUTM2E	B1AL46	878 aa	Predicted RBP	27.54	■■■□□ 2
SYNGAP1-206	ENST00000479510	PDE4D	Q08499	809 aa		27.54	■■■□□ 2
SYNGAP1-206	ENST00000479510	SLC44A5	Q8NCS7	719 aa		27.54	■■■□□ 2
SYNGAP1-206	ENST00000479510	LRRC15	Q8TF66	581 aa		27.54	■■■□□ 2
SYNGAP1-206	ENST00000479510	ERGIC2	Q96RQ1	377 aa		27.54	■■■□□ 2
SYNGAP1-206	ENST00000479510	DDX60L	Q5H9U9	1706 aa	Known RBP	27.54	■■■□□ 2
SYNGAP1-206	ENST00000479510	KRT86	O43790	486 aa		27.53	■■■□□ 2
SYNGAP1-206	ENST00000479510	CCNT1	O60563	726 aa	Known RBP	27.53	■■■□□ 2
SYNGAP1-206	ENST00000479510	MCM3	P25205	808 aa		27.53	■■■□□ 2
SYNGAP1-206	ENST00000479510	VPS72	Q15906	364 aa		27.53	■■■□□ 2
SYNGAP1-206	ENST00000479510	PAPD7	Q5XG87	772 aa	Known RBP	27.53	■■■□□ 2
SYNGAP1-206	ENST00000479510	ARHGEF1	Q92888	912 aa	Known RBP	27.53	■■■□□ 2
SYNGAP1-206	ENST00000479510		B4DLN1	442 aa		27.53	■■■□□ 2
SYNGAP1-206	ENST00000479510	EIF3CL	B5ME19	914 aa	Known RBP	27.53	■■■□□ 2
SYNGAP1-206	ENST00000479510	HERVK_113	P62684	666 aa		27.53	■■■□□ 2
SYNGAP1-206	ENST00000479510	LETM2	Q2VYF4	491 aa		27.53	■■■□□ 2
SYNGAP1-206	ENST00000479510	MAPKAPK5	Q8IW41	473 aa		27.53	■■■□□ 2
SYNGAP1-206	ENST00000479510	CALML4	Q96GE6	196 aa		27.53	■■■□□ 2
SYNGAP1-206	ENST00000479510	FAM163A	Q96GL9	167 aa	Predicted RBP	27.53	■■■□□ 2
SYNGAP1-206	ENST00000479510	EIF3C	Q99613	913 aa	Known RBP	27.53	■■■□□ 2
SYNGAP1-206	ENST00000479510	STK17A	Q9UEE5	414 aa		27.53	■■■□□ 2
SYNGAP1-206	ENST00000479510	GUCA1B	Q9UMX6	200 aa		27.53	■■■□□ 2
SYNGAP1-206	ENST00000479510	PES1	O00541	588 aa	Known RBP	27.52	■■■□□ 2
SYNGAP1-206	ENST00000479510	IPO7	O95373	1038 aa	Known RBP	27.52	■■■□□ 2
SYNGAP1-206	ENST00000479510	ASIC1	P78348	528 aa		27.52	■■■□□ 2
SYNGAP1-206	ENST00000479510	TBC1D8B	Q0IIM8	1120 aa		27.52	■■■□□ 2
SYNGAP1-206	ENST00000479510	SMIM5	Q71RC9	77 aa		27.52	■■■□□ 2
SYNGAP1-206	ENST00000479510	SLF2	Q8IX21	1173 aa		27.52	■■■□□ 2
SYNGAP1-206	ENST00000479510	EXOC4	Q96A65	974 aa		27.52	■■■□□ 2
SYNGAP1-206	ENST00000479510	CNOT6L	Q96LI5	555 aa	Known RBP	27.52	■■■□□ 2
SYNGAP1-206	ENST00000479510	ABCB11	O95342	1321 aa		27.52	■■■□□ 2
SYNGAP1-206	ENST00000479510	TRIM21	P19474	475 aa	Known RBP	27.52	■■■□□ 2
SYNGAP1-206	ENST00000479510	BTD	P43251	543 aa		27.51	■■□□□ 1.99
SYNGAP1-206	ENST00000479510	CCDC122	Q5T0U0	273 aa		27.51	■■□□□ 1.99
SYNGAP1-206	ENST00000479510	ANKRD40	Q6AI12	368 aa		27.51	■■□□□ 1.99
SYNGAP1-206	ENST00000479510	CCDC24	Q8N4L8	307 aa		27.51	■■□□□ 1.99
SYNGAP1-206	ENST00000479510	PLIN2	Q99541	437 aa		27.51	■■□□□ 1.99
SYNGAP1-206	ENST00000479510	CCNL1	Q9UK58	526 aa	Predicted RBP	27.51	■■□□□ 1.99
SYNGAP1-206	ENST00000479510	PVALEF	A0A1B0GWK0	134 aa		27.5	■■□□□ 1.99
SYNGAP1-206	ENST00000479510	ANO9	A1A5B4	782 aa		27.5	■■□□□ 1.99

Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms