RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 MRPL18Q9H0U6 180 aaKnown RBP5.78□□□□□ -1.48
SF3B6-202ENST00000478050 NUP62CLQ9H1M0 184 aa5.78□□□□□ -1.48
SF3B6-202ENST00000478050 TMOD3Q9NYL9 352 aa5.78□□□□□ -1.48
SF3B6-202ENST00000478050 MAST3O60307 1309 aa5.77□□□□□ -1.49
SF3B6-202ENST00000478050 CDHR2Q9BYE9 1310 aa5.77□□□□□ -1.49
SF3B6-202ENST00000478050 DOT1LQ8TEK3 1739 aa5.77□□□□□ -1.49
SF3B6-202ENST00000478050 A0A1B0GUL7 405 aa5.77□□□□□ -1.49
SF3B6-202ENST00000478050 H3BQV1 296 aa5.77□□□□□ -1.49
SF3B6-202ENST00000478050 DEAF1O75398 565 aaPredicted RBP5.77□□□□□ -1.49
SF3B6-202ENST00000478050 MED26O95402 600 aa5.77□□□□□ -1.49
SF3B6-202ENST00000478050 ADCY5O95622 1261 aa5.77□□□□□ -1.49
SF3B6-202ENST00000478050 HCLS1P14317 486 aaPredicted RBP5.77□□□□□ -1.49
SF3B6-202ENST00000478050 EPB42P16452 691 aa5.77□□□□□ -1.49
SF3B6-202ENST00000478050 ARID4AP29374 1257 aaPredicted RBP5.77□□□□□ -1.49
SF3B6-202ENST00000478050 FGD1P98174 961 aa5.77□□□□□ -1.49
SF3B6-202ENST00000478050 KIAA2012Q0VF49 1180 aa5.77□□□□□ -1.49
SF3B6-202ENST00000478050 STK3Q13188 491 aa5.77□□□□□ -1.49
SF3B6-202ENST00000478050 CCDC57Q2TAC2 916 aa5.77□□□□□ -1.49
SF3B6-202ENST00000478050 LRRC24Q50LG9 513 aa5.77□□□□□ -1.49
SF3B6-202ENST00000478050 CCDC158Q5M9N0 1113 aa5.77□□□□□ -1.49
SF3B6-202ENST00000478050 TTC39AQ5SRH9 613 aa5.77□□□□□ -1.49
SF3B6-202ENST00000478050 GIMAP6Q6P9H5 292 aa5.77□□□□□ -1.49
SF3B6-202ENST00000478050 STOX1Q6ZVD7 989 aa5.77□□□□□ -1.49
SF3B6-202ENST00000478050 FERMT3Q86UX7 667 aa5.77□□□□□ -1.49
SF3B6-202ENST00000478050 LEO1Q8WVC0 666 aaPredicted RBP5.77□□□□□ -1.49
SF3B6-202ENST00000478050 TTC9Q92623 222 aa5.77□□□□□ -1.49
SF3B6-202ENST00000478050 BRF1Q92994 677 aa5.77□□□□□ -1.49
SF3B6-202ENST00000478050 TCEANC2Q96MN5 208 aa5.77□□□□□ -1.49
SF3B6-202ENST00000478050 SEC62Q99442 399 aaKnown RBP5.77□□□□□ -1.49
SF3B6-202ENST00000478050 USP25Q9UHP3 1055 aa5.77□□□□□ -1.49
SF3B6-202ENST00000478050 CTNNA3Q9UI47 895 aa5.77□□□□□ -1.49
SF3B6-202ENST00000478050 CFAP45Q9UL16 551 aa5.77□□□□□ -1.49
SF3B6-202ENST00000478050 RAXQ9Y2V3 346 aa5.77□□□□□ -1.49
SF3B6-202ENST00000478050 TAF6LQ9Y6J9 622 aa5.77□□□□□ -1.49
SF3B6-202ENST00000478050 MYH6P13533 1939 aa5.77□□□□□ -1.49
SF3B6-202ENST00000478050 CICQ96RK0 1608 aaPredicted RBP5.77□□□□□ -1.49
SF3B6-202ENST00000478050 RIC1Q4ADV7 1423 aa5.76□□□□□ -1.49
SF3B6-202ENST00000478050 GOLGA6L6A8MZA4 724 aa5.76□□□□□ -1.49
SF3B6-202ENST00000478050 USP17L15C9J2P7 530 aa5.76□□□□□ -1.49
SF3B6-202ENST00000478050 USP17L10C9JJH3 530 aa5.76□□□□□ -1.49
SF3B6-202ENST00000478050 USP17L13C9JLJ4 530 aa5.76□□□□□ -1.49
SF3B6-202ENST00000478050 USP17L12C9JPN9 530 aa5.76□□□□□ -1.49
SF3B6-202ENST00000478050 USP17L11C9JVI0 530 aa5.76□□□□□ -1.49
SF3B6-202ENST00000478050 USP17L21D6R901 530 aa5.76□□□□□ -1.49
SF3B6-202ENST00000478050 USP17L18D6R9N7 530 aa5.76□□□□□ -1.49
SF3B6-202ENST00000478050 USP17L22D6RA61 530 aa5.76□□□□□ -1.49
SF3B6-202ENST00000478050 USP17L17D6RBQ6 530 aa5.76□□□□□ -1.49
SF3B6-202ENST00000478050 USP17L19D6RCP7 530 aa5.76□□□□□ -1.49
SF3B6-202ENST00000478050 USP17L20D6RJB6 530 aa5.76□□□□□ -1.49
SF3B6-202ENST00000478050 E7EWF7 191 aa5.76□□□□□ -1.49
SF3B6-202ENST00000478050 JAK2O60674 1132 aa5.76□□□□□ -1.49
SF3B6-202ENST00000478050 MAP3K6O95382 1288 aa5.76□□□□□ -1.49
SF3B6-202ENST00000478050 STARD3NLO95772 234 aa5.76□□□□□ -1.49
SF3B6-202ENST00000478050 CAVIN2O95810 425 aa5.76□□□□□ -1.49
SF3B6-202ENST00000478050 IGLV1-40P01703 118 aa5.76□□□□□ -1.49
SF3B6-202ENST00000478050 CSF1RP07333 972 aa5.76□□□□□ -1.49
SF3B6-202ENST00000478050 HSPD1P10809 573 aaKnown RBP5.76□□□□□ -1.49
SF3B6-202ENST00000478050 GLB1P16278 677 aa5.76□□□□□ -1.49
SF3B6-202ENST00000478050 LIG1P18858 919 aa5.76□□□□□ -1.49
SF3B6-202ENST00000478050 GRIK1P39086 918 aa5.76□□□□□ -1.49
SF3B6-202ENST00000478050 TIMM10P62072 90 aa5.76□□□□□ -1.49
SF3B6-202ENST00000478050 EXOSC10Q01780 885 aaKnown RBP5.76□□□□□ -1.49
SF3B6-202ENST00000478050 USP17L24Q0WX57 530 aa5.76□□□□□ -1.49
SF3B6-202ENST00000478050 SCRN1Q12765 414 aa5.76□□□□□ -1.49
SF3B6-202ENST00000478050 ELOAQ14241 798 aaKnown RBP5.76□□□□□ -1.49
SF3B6-202ENST00000478050 TAF7LQ5H9L4 462 aa5.76□□□□□ -1.49
SF3B6-202ENST00000478050 GORABQ5T7V8 394 aa5.76□□□□□ -1.49
SF3B6-202ENST00000478050 KRTAP5-3Q6L8H2 238 aa5.76□□□□□ -1.49
SF3B6-202ENST00000478050 ZSCAN25Q6NSZ9 544 aa5.76□□□□□ -1.49
SF3B6-202ENST00000478050 RBM43Q6ZSC3 357 aaKnown RBP5.76□□□□□ -1.49
SF3B6-202ENST00000478050 KRT25Q7Z3Z0 450 aa5.76□□□□□ -1.49
SF3B6-202ENST00000478050 TMEM130Q8N3G9 435 aa5.76□□□□□ -1.49
SF3B6-202ENST00000478050 FBXL16Q8N461 479 aa5.76□□□□□ -1.49
SF3B6-202ENST00000478050 NSUN7Q8NE18 718 aaKnown RBP5.76□□□□□ -1.49
SF3B6-202ENST00000478050 FAM200AQ8TCP9 573 aa5.76□□□□□ -1.49
SF3B6-202ENST00000478050 ZNF274Q96GC6 653 aaPredicted RBP5.76□□□□□ -1.49
SF3B6-202ENST00000478050 ZNF594Q96JF6 807 aaPredicted RBP5.76□□□□□ -1.49
SF3B6-202ENST00000478050 ZNF396Q96N95 335 aaPredicted RBP5.76□□□□□ -1.49
SF3B6-202ENST00000478050 TNMDQ9H2S6 317 aa5.76□□□□□ -1.49
SF3B6-202ENST00000478050 CLSTN2Q9H4D0 955 aa5.76□□□□□ -1.49
SF3B6-202ENST00000478050 STOML1Q9UBI4 398 aa5.76□□□□□ -1.49
SF3B6-202ENST00000478050 MKRN1Q9UHC7 482 aaKnown RBP5.76□□□□□ -1.49
SF3B6-202ENST00000478050 THRAP3Q9Y2W1 955 aaKnown RBP5.76□□□□□ -1.49
SF3B6-202ENST00000478050 CD2APQ9Y5K6 639 aa5.76□□□□□ -1.49
SF3B6-202ENST00000478050 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.76□□□□□ -1.49
SF3B6-202ENST00000478050 MAP3K15Q6ZN16 1313 aa5.75□□□□□ -1.49
SF3B6-202ENST00000478050 WDR19Q8NEZ3 1342 aa5.75□□□□□ -1.49
SF3B6-202ENST00000478050 A0A1B0GUL6 1792 aa5.75□□□□□ -1.49
SF3B6-202ENST00000478050 CUL9Q8IWT3 2517 aa5.75□□□□□ -1.49
SF3B6-202ENST00000478050 TIAM2Q8IVF5 1701 aa5.75□□□□□ -1.49
SF3B6-202ENST00000478050 PTPDC1A2A3K4 754 aa5.75□□□□□ -1.49
SF3B6-202ENST00000478050 KIAA1324LA8MWY0 1029 aaPredicted RBP5.75□□□□□ -1.49
SF3B6-202ENST00000478050 F8W735 103 aaPredicted RBP5.75□□□□□ -1.49
SF3B6-202ENST00000478050 M0R2C6 588 aa5.75□□□□□ -1.49
SF3B6-202ENST00000478050 CTAGE5O15320 804 aa5.75□□□□□ -1.49
SF3B6-202ENST00000478050 RRP9O43818 475 aaKnown RBP5.75□□□□□ -1.49
SF3B6-202ENST00000478050 TGFB1P01137 390 aa5.75□□□□□ -1.49
SF3B6-202ENST00000478050 RASA1P20936 1047 aa5.75□□□□□ -1.49
SF3B6-202ENST00000478050 EVCP57679 992 aa5.75□□□□□ -1.49
SF3B6-202ENST00000478050 PLAURQ03405 335 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms