RNA–Protein interactions for RNA: ENST00000477403.1

RPL39-203, Transcript of ribosomal protein L39, humanhuman

TSL 3

Gene RPL39, Length 405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-203ENST00000477403 ZNRF3Q9ULT6 936 aa5.58□□□□□ -1.52
RPL39-203ENST00000477403 RNF17Q9BXT8 1623 aaKnown RBP5.58□□□□□ -1.52
RPL39-203ENST00000477403 SRCAPQ6ZRS2 3230 aa5.57□□□□□ -1.52
RPL39-203ENST00000477403 PRAMEF1O95521 474 aa5.57□□□□□ -1.52
RPL39-203ENST00000477403 VAMP1P23763 118 aa5.57□□□□□ -1.52
RPL39-203ENST00000477403 RPL10P27635 214 aaKnown RBP5.57□□□□□ -1.52
RPL39-203ENST00000477403 MESP2Q0VG99 397 aa5.57□□□□□ -1.52
RPL39-203ENST00000477403 DUSP4Q13115 394 aa5.57□□□□□ -1.52
RPL39-203ENST00000477403 USHBP1Q8N6Y0 703 aa5.57□□□□□ -1.52
RPL39-203ENST00000477403 DAGLBQ8NCG7 672 aa5.57□□□□□ -1.52
RPL39-203ENST00000477403 RNF32Q9H0A6 362 aa5.57□□□□□ -1.52
RPL39-203ENST00000477403 PPT2Q9UMR5 302 aa5.57□□□□□ -1.52
RPL39-203ENST00000477403 MINPP1Q9UNW1 487 aa5.57□□□□□ -1.52
RPL39-203ENST00000477403 SYNMO15061 1565 aa5.57□□□□□ -1.52
RPL39-203ENST00000477403 LRRC9Q6ZRR7 1453 aa5.57□□□□□ -1.52
RPL39-203ENST00000477403 ARHGAP23Q9P227 1491 aa5.57□□□□□ -1.52
RPL39-203ENST00000477403 POLR1AO95602 1720 aaPredicted RBP5.57□□□□□ -1.52
RPL39-203ENST00000477403 CDC42BPAQ5VT25 1732 aa5.57□□□□□ -1.52
RPL39-203ENST00000477403 ADGBQ8N7X0 1667 aa5.56□□□□□ -1.52
RPL39-203ENST00000477403 MSH6P52701 1360 aa5.56□□□□□ -1.52
RPL39-203ENST00000477403 TMEM2Q9UHN6 1383 aa5.56□□□□□ -1.52
RPL39-203ENST00000477403 FITM1A5D6W6 292 aa5.56□□□□□ -1.52
RPL39-203ENST00000477403 MEIS1O00470 390 aa5.56□□□□□ -1.52
RPL39-203ENST00000477403 SIGLEC6O43699 453 aa5.56□□□□□ -1.52
RPL39-203ENST00000477403 FKTNO75072 461 aa5.56□□□□□ -1.52
RPL39-203ENST00000477403 SYPP08247 313 aa5.56□□□□□ -1.52
RPL39-203ENST00000477403 IMPDH2P12268 514 aa5.56□□□□□ -1.52
RPL39-203ENST00000477403 PCBP3P57721 371 aaKnown RBP5.56□□□□□ -1.52
RPL39-203ENST00000477403 PAK2Q13177 524 aa5.56□□□□□ -1.52
RPL39-203ENST00000477403 MEX3CQ5U5Q3 659 aaKnown RBP5.56□□□□□ -1.52
RPL39-203ENST00000477403 RNF111Q6ZNA4 994 aa5.56□□□□□ -1.52
RPL39-203ENST00000477403 WAPLQ7Z5K2 1190 aa5.56□□□□□ -1.52
RPL39-203ENST00000477403 SPPL2CQ8IUH8 684 aa5.56□□□□□ -1.52
RPL39-203ENST00000477403 ZNF654Q8IZM8 581 aa5.56□□□□□ -1.52
RPL39-203ENST00000477403 LILRA2Q8N149 483 aa5.56□□□□□ -1.52
RPL39-203ENST00000477403 ZNF655Q8N720 491 aaPredicted RBP5.56□□□□□ -1.52
RPL39-203ENST00000477403 SP110Q9HB58 689 aa5.56□□□□□ -1.52
RPL39-203ENST00000477403 GFOD1Q9NXC2 390 aa5.56□□□□□ -1.52
RPL39-203ENST00000477403 EBF1Q9UH73 591 aa5.56□□□□□ -1.52
RPL39-203ENST00000477403 ZMYM5Q9UJ78 669 aa5.56□□□□□ -1.52
RPL39-203ENST00000477403 TCFL5Q9UL49 500 aa5.56□□□□□ -1.52
RPL39-203ENST00000477403 PCDHB12Q9Y5F1 795 aa5.56□□□□□ -1.52
RPL39-203ENST00000477403 ERVK-7P63135 1459 aa5.56□□□□□ -1.52
RPL39-203ENST00000477403 CCDC141Q6ZP82 1450 aa5.56□□□□□ -1.52
RPL39-203ENST00000477403 IQGAP1P46940 1657 aa5.56□□□□□ -1.52
RPL39-203ENST00000477403 ARHGAP31Q2M1Z3 1444 aa5.56□□□□□ -1.52
RPL39-203ENST00000477403 CEP162Q5TB80 1403 aa5.56□□□□□ -1.52
RPL39-203ENST00000477403 FGD6Q6ZV73 1430 aa5.56□□□□□ -1.52
RPL39-203ENST00000477403 NCOA3Q9Y6Q9 1424 aa5.56□□□□□ -1.52
RPL39-203ENST00000477403 SLIT1O75093 1534 aa5.55□□□□□ -1.52
RPL39-203ENST00000477403 ACRP10323 421 aa5.55□□□□□ -1.52
RPL39-203ENST00000477403 CHRNEQ04844 493 aa5.55□□□□□ -1.52
RPL39-203ENST00000477403 TIGD5Q53EQ6 642 aa5.55□□□□□ -1.52
RPL39-203ENST00000477403 C9orf131Q5VYM1 1079 aa5.55□□□□□ -1.52
RPL39-203ENST00000477403 TDRD10Q5VZ19 366 aaKnown RBP5.55□□□□□ -1.52
RPL39-203ENST00000477403 SYDE1Q6ZW31 735 aaPredicted RBP5.55□□□□□ -1.52
RPL39-203ENST00000477403 CCDC144CPQ8IYA2 1237 aa5.55□□□□□ -1.52
RPL39-203ENST00000477403 ANKS4BQ8N8V4 417 aa5.55□□□□□ -1.52
RPL39-203ENST00000477403 SLC26A8Q96RN1 970 aa5.55□□□□□ -1.52
RPL39-203ENST00000477403 KCNK12Q9HB15 430 aa5.55□□□□□ -1.52
RPL39-203ENST00000477403 DCP1AQ9NPI6 582 aaPredicted RBP5.55□□□□□ -1.52
RPL39-203ENST00000477403 CHST7Q9NS84 486 aa5.55□□□□□ -1.52
RPL39-203ENST00000477403 SLC52A1Q9NWF4 448 aa5.55□□□□□ -1.52
RPL39-203ENST00000477403 GPR160Q9UJ42 338 aa5.55□□□□□ -1.52
RPL39-203ENST00000477403 NCOA2Q15596 1464 aa5.55□□□□□ -1.52
RPL39-203ENST00000477403 CDK12Q9NYV4 1490 aaPredicted RBP5.54□□□□□ -1.52
RPL39-203ENST00000477403 BTBD11A6QL63 1104 aa5.54□□□□□ -1.52
RPL39-203ENST00000477403 C9IYK1 514 aa5.54□□□□□ -1.52
RPL39-203ENST00000477403 E9PSI1 815 aa5.54□□□□□ -1.52
RPL39-203ENST00000477403 USP2O75604 605 aaPredicted RBP5.54□□□□□ -1.52
RPL39-203ENST00000477403 JAG1P78504 1218 aa5.54□□□□□ -1.52
RPL39-203ENST00000477403 FZD5Q13467 585 aa5.54□□□□□ -1.52
RPL39-203ENST00000477403 AUHQ13825 339 aaKnown RBP5.54□□□□□ -1.52
RPL39-203ENST00000477403 IDI1Q13907 227 aa5.54□□□□□ -1.52
RPL39-203ENST00000477403 INTS3Q68E01 1043 aaKnown RBP5.54□□□□□ -1.52
RPL39-203ENST00000477403 ZPBP2Q6X784 338 aa5.54□□□□□ -1.52
RPL39-203ENST00000477403 CCDC81Q6ZN84 652 aa5.54□□□□□ -1.52
RPL39-203ENST00000477403 RUFY4Q6ZNE9 571 aa5.54□□□□□ -1.52
RPL39-203ENST00000477403 METTL16Q86W50 562 aaKnown RBP5.54□□□□□ -1.52
RPL39-203ENST00000477403 NT5DC4Q86YG4 428 aa5.54□□□□□ -1.52
RPL39-203ENST00000477403 FBXO15Q8NCQ5 510 aaPredicted RBP5.54□□□□□ -1.52
RPL39-203ENST00000477403 DHRS1Q96LJ7 313 aa5.54□□□□□ -1.52
RPL39-203ENST00000477403 TM9SF2Q99805 663 aa5.54□□□□□ -1.52
RPL39-203ENST00000477403 EPB41L4BQ9H329 900 aa5.54□□□□□ -1.52
RPL39-203ENST00000477403 GINM1Q9NU53 330 aa5.54□□□□□ -1.52
RPL39-203ENST00000477403 FAM86C1Q9NVL1 165 aa5.54□□□□□ -1.52
RPL39-203ENST00000477403 SUCOQ9UBS9 1254 aaKnown RBP5.54□□□□□ -1.52
RPL39-203ENST00000477403 TBX22Q9Y458 520 aa5.54□□□□□ -1.52
RPL39-203ENST00000477403 ABCC3O15438 1527 aa5.53□□□□□ -1.52
RPL39-203ENST00000477403 PSPNO60542 156 aa5.53□□□□□ -1.52
RPL39-203ENST00000477403 ATF3P18847 181 aa5.53□□□□□ -1.52
RPL39-203ENST00000477403 GALK1P51570 392 aa5.53□□□□□ -1.52
RPL39-203ENST00000477403 RBM6P78332 1123 aaKnown RBP5.53□□□□□ -1.52
RPL39-203ENST00000477403 HDLBPQ00341 1268 aaKnown RBP5.53□□□□□ -1.52
RPL39-203ENST00000477403 NR0B2Q15466 257 aa5.53□□□□□ -1.52
RPL39-203ENST00000477403 BBS9Q3SYG4 887 aa5.53□□□□□ -1.52
RPL39-203ENST00000477403 LINC00116Q8NCU8 138 aa5.53□□□□□ -1.52
RPL39-203ENST00000477403 LINC01599Q8WXQ3 324 aa5.53□□□□□ -1.52
RPL39-203ENST00000477403 CRBNQ96SW2 442 aa5.53□□□□□ -1.52
RPL39-203ENST00000477403 PPP1R16BQ96T49 567 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms