RNA–Protein interactions for RNA: ENST00000476742.1

NPHP3-207, Transcript of nephrocystin 3, humanhuman

TSL 3

Gene NPHP3, Length 650 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-207ENST00000476742 FOXD2O60548 495 aaPredicted RBP5□□□□□ -1.61
NPHP3-207ENST00000476742 GLI1P08151 1106 aa5□□□□□ -1.61
NPHP3-207ENST00000476742 SNX17Q15036 470 aa5□□□□□ -1.61
NPHP3-207ENST00000476742 SOGA3Q5TF21 947 aa5□□□□□ -1.61
NPHP3-207ENST00000476742 CYP2R1Q6VVX0 501 aa5□□□□□ -1.61
NPHP3-207ENST00000476742 ZPBP2Q6X784 338 aa5□□□□□ -1.61
NPHP3-207ENST00000476742 CEP128Q6ZU80 1094 aa5□□□□□ -1.61
NPHP3-207ENST00000476742 MICAL1Q8TDZ2 1067 aa5□□□□□ -1.61
NPHP3-207ENST00000476742 FCRL3Q96P31 734 aaPredicted RBP5□□□□□ -1.61
NPHP3-207ENST00000476742 G6PC3Q9BUM1 346 aa5□□□□□ -1.61
NPHP3-207ENST00000476742 APEX2Q9UBZ4 518 aa5□□□□□ -1.61
NPHP3-207ENST00000476742 GPR160Q9UJ42 338 aa5□□□□□ -1.61
NPHP3-207ENST00000476742 A0A1W2PQ27 194 aa4.99□□□□□ -1.61
NPHP3-207ENST00000476742 A0A1W2PQ45 241 aaPredicted RBP4.99□□□□□ -1.61
NPHP3-207ENST00000476742 A0A1W2PQ64 194 aa4.99□□□□□ -1.61
NPHP3-207ENST00000476742 A0A1W2PQC6 194 aa4.99□□□□□ -1.61
NPHP3-207ENST00000476742 A0A1W2PQD8 194 aa4.99□□□□□ -1.61
NPHP3-207ENST00000476742 A0A1W2PQY0 241 aa4.99□□□□□ -1.61
NPHP3-207ENST00000476742 VAMP4O75379 141 aa4.99□□□□□ -1.61
NPHP3-207ENST00000476742 USP2O75604 605 aaPredicted RBP4.99□□□□□ -1.61
NPHP3-207ENST00000476742 KCNH1O95259 989 aa4.99□□□□□ -1.61
NPHP3-207ENST00000476742 TBC1D8O95759 1140 aa4.99□□□□□ -1.61
NPHP3-207ENST00000476742 SEPHS1P49903 392 aa4.99□□□□□ -1.61
NPHP3-207ENST00000476742 RTP1P59025 263 aa4.99□□□□□ -1.61
NPHP3-207ENST00000476742 ERVFC1P60507 584 aa4.99□□□□□ -1.61
NPHP3-207ENST00000476742 DPY19L1Q2PZI1 675 aa4.99□□□□□ -1.61
NPHP3-207ENST00000476742 RTP2Q5QGT7 225 aa4.99□□□□□ -1.61
NPHP3-207ENST00000476742 FYB2Q5VWT5 728 aa4.99□□□□□ -1.61
NPHP3-207ENST00000476742 HLA-DQA1Q5Y7H0 255 aa4.99□□□□□ -1.61
NPHP3-207ENST00000476742 MPZL3Q6UWV2 235 aa4.99□□□□□ -1.61
NPHP3-207ENST00000476742 JAMLQ86YT9 394 aa4.99□□□□□ -1.61
NPHP3-207ENST00000476742 CELF2-AS1Q8N7Q2 184 aa4.99□□□□□ -1.61
NPHP3-207ENST00000476742 HHIPL1Q96JK4 782 aa4.99□□□□□ -1.61
NPHP3-207ENST00000476742 C19orf44Q9H6X5 657 aa4.99□□□□□ -1.61
NPHP3-207ENST00000476742 CWC22Q9HCG8 908 aaKnown RBP4.99□□□□□ -1.61
NPHP3-207ENST00000476742 ERVK13-1Q9NX77 482 aa4.99□□□□□ -1.61
NPHP3-207ENST00000476742 EMC9Q9Y3B6 208 aa4.99□□□□□ -1.61
NPHP3-207ENST00000476742 C2orf71A6NGG8 1288 aa4.98□□□□□ -1.61
NPHP3-207ENST00000476742 WTIPA6NIX2 430 aaPredicted RBP4.98□□□□□ -1.61
NPHP3-207ENST00000476742 AURKAO14965 403 aa4.98□□□□□ -1.61
NPHP3-207ENST00000476742 FGF10O15520 208 aaPredicted RBP4.98□□□□□ -1.61
NPHP3-207ENST00000476742 NRDCO43847 1150 aa4.98□□□□□ -1.61
NPHP3-207ENST00000476742 IFNGR1P15260 489 aa4.98□□□□□ -1.61
NPHP3-207ENST00000476742 TRHRP34981 398 aaPredicted RBP4.98□□□□□ -1.61
NPHP3-207ENST00000476742 NFKB2Q00653 900 aa4.98□□□□□ -1.61
NPHP3-207ENST00000476742 RBL2Q08999 1139 aa4.98□□□□□ -1.61
NPHP3-207ENST00000476742 EEF1DP3Q658K8 133 aa4.98□□□□□ -1.61
NPHP3-207ENST00000476742 MRM1Q6IN84 353 aaKnown RBP4.98□□□□□ -1.61
NPHP3-207ENST00000476742 RCSD1Q6JBY9 416 aa4.98□□□□□ -1.61
NPHP3-207ENST00000476742 GALNT18Q6P9A2 607 aa4.98□□□□□ -1.61
NPHP3-207ENST00000476742 SIRPGQ9P1W8 387 aa4.98□□□□□ -1.61
NPHP3-207ENST00000476742 EBF1Q9UH73 591 aa4.98□□□□□ -1.61
NPHP3-207ENST00000476742 GPR55Q9Y2T6 319 aaPredicted RBP4.98□□□□□ -1.61
NPHP3-207ENST00000476742 BACE2Q9Y5Z0 518 aa4.98□□□□□ -1.61
NPHP3-207ENST00000476742 TAF6LQ9Y6J9 622 aa4.98□□□□□ -1.61
NPHP3-207ENST00000476742 TRBV23OR9-2A0A075B6M9 112 aa4.97□□□□□ -1.61
NPHP3-207ENST00000476742 IQCA1LA6NCM1 817 aa4.97□□□□□ -1.61
NPHP3-207ENST00000476742 FADS2P1A8MWK0 482 aa4.97□□□□□ -1.61
NPHP3-207ENST00000476742 STXBP3O00186 592 aa4.97□□□□□ -1.61
NPHP3-207ENST00000476742 RBM10P98175 930 aaKnown RBP4.97□□□□□ -1.61
NPHP3-207ENST00000476742 GTF2IRD2BQ6EKJ0 949 aa4.97□□□□□ -1.61
NPHP3-207ENST00000476742 GTF2IRD2Q86UP8 949 aa4.97□□□□□ -1.61
NPHP3-207ENST00000476742 TRIM59Q8IWR1 403 aa4.97□□□□□ -1.61
NPHP3-207ENST00000476742 ZNF513Q8N8E2 541 aaPredicted RBP4.97□□□□□ -1.61
NPHP3-207ENST00000476742 ST13P5Q8NFI4 369 aaPredicted RBP4.97□□□□□ -1.61
NPHP3-207ENST00000476742 DRC1Q96MC2 740 aa4.97□□□□□ -1.61
NPHP3-207ENST00000476742 PTCHD1Q96NR3 888 aa4.97□□□□□ -1.61
NPHP3-207ENST00000476742 SLC6A17Q9H1V8 727 aa4.97□□□□□ -1.61
NPHP3-207ENST00000476742 ITGAVP06756 1048 aa4.96□□□□□ -1.62
NPHP3-207ENST00000476742 ARL4AP40617 200 aa4.96□□□□□ -1.62
NPHP3-207ENST00000476742 HSF5Q4G112 596 aaPredicted RBP4.96□□□□□ -1.62
NPHP3-207ENST00000476742 ZNF227Q86WZ6 799 aa4.96□□□□□ -1.62
NPHP3-207ENST00000476742 MRGPRX3Q96LB0 322 aa4.96□□□□□ -1.62
NPHP3-207ENST00000476742 CCDC140Q96MF4 163 aa4.96□□□□□ -1.62
NPHP3-207ENST00000476742 RNF32Q9H0A6 362 aa4.96□□□□□ -1.62
NPHP3-207ENST00000476742 CCDC113Q9H0I3 377 aa4.96□□□□□ -1.62
NPHP3-207ENST00000476742 SP110Q9HB58 689 aa4.96□□□□□ -1.62
NPHP3-207ENST00000476742 CRTAC1Q9NQ79 661 aa4.96□□□□□ -1.62
NPHP3-207ENST00000476742 CYP26B1Q9NR63 512 aa4.96□□□□□ -1.62
NPHP3-207ENST00000476742 A0A1W2PQJ5 194 aa4.95□□□□□ -1.62
NPHP3-207ENST00000476742 ZNF503-AS2A6NEH8 195 aa4.95□□□□□ -1.62
NPHP3-207ENST00000476742 LRRC10BA6NIK2 292 aa4.95□□□□□ -1.62
NPHP3-207ENST00000476742 CCDC85CA6NKD9 419 aa4.95□□□□□ -1.62
NPHP3-207ENST00000476742 PDPK1O15530 556 aa4.95□□□□□ -1.62
NPHP3-207ENST00000476742 PAMP19021 973 aa4.95□□□□□ -1.62
NPHP3-207ENST00000476742 HOXC12P31275 282 aa4.95□□□□□ -1.62
NPHP3-207ENST00000476742 SCRN1Q12765 414 aa4.95□□□□□ -1.62
NPHP3-207ENST00000476742 LAPTM5Q13571 262 aa4.95□□□□□ -1.62
NPHP3-207ENST00000476742 SLC10A6Q3KNW5 377 aa4.95□□□□□ -1.62
NPHP3-207ENST00000476742 TIGD5Q53EQ6 642 aa4.95□□□□□ -1.62
NPHP3-207ENST00000476742 SLCO6A1Q86UG4 719 aa4.95□□□□□ -1.62
NPHP3-207ENST00000476742 NLRX1Q86UT6 975 aa4.95□□□□□ -1.62
NPHP3-207ENST00000476742 SIRT2Q8IXJ6 389 aa4.95□□□□□ -1.62
NPHP3-207ENST00000476742 TMEM52Q8NDY8 209 aa4.95□□□□□ -1.62
NPHP3-207ENST00000476742 NUP43Q8NFH3 380 aa4.95□□□□□ -1.62
NPHP3-207ENST00000476742 PMFBP1Q8TBY8 1022 aa4.95□□□□□ -1.62
NPHP3-207ENST00000476742 BTN2A2Q8WVV5 523 aa4.95□□□□□ -1.62
NPHP3-207ENST00000476742 ZNF669Q96BR6 464 aaPredicted RBP4.95□□□□□ -1.62
NPHP3-207ENST00000476742 LIN37Q96GY3 246 aaPredicted RBP4.95□□□□□ -1.62
NPHP3-207ENST00000476742 SGSM3Q96HU1 749 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms