RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 RCC1LQ96I51 464 aaKnown RBP7.47□□□□□ -1.21
PTCD3-211ENST00000476215 LGR4Q9BXB1 951 aa7.47□□□□□ -1.21
PTCD3-211ENST00000476215 CRTAC1Q9NQ79 661 aa7.47□□□□□ -1.21
PTCD3-211ENST00000476215 TNFRSF10DQ9UBN6 386 aa7.47□□□□□ -1.21
PTCD3-211ENST00000476215 CGGBP1Q9UFW8 167 aaPredicted RBP7.47□□□□□ -1.21
PTCD3-211ENST00000476215 PFDN2Q9UHV9 154 aa7.47□□□□□ -1.21
PTCD3-211ENST00000476215 AKT3Q9Y243 479 aa7.47□□□□□ -1.21
PTCD3-211ENST00000476215 DIS3Q9Y2L1 958 aaKnown RBP7.47□□□□□ -1.21
PTCD3-211ENST00000476215 SSU72P8A0A1W2PR75 194 aa7.46□□□□□ -1.22
PTCD3-211ENST00000476215 FADS2P1A8MWK0 482 aa7.46□□□□□ -1.22
PTCD3-211ENST00000476215 H0Y8X5 98 aa7.46□□□□□ -1.22
PTCD3-211ENST00000476215 PSPNO60542 156 aa7.46□□□□□ -1.22
PTCD3-211ENST00000476215 PEX10O60683 326 aa7.46□□□□□ -1.22
PTCD3-211ENST00000476215 GSNP06396 782 aa7.46□□□□□ -1.22
PTCD3-211ENST00000476215 GLDCP23378 1020 aa7.46□□□□□ -1.22
PTCD3-211ENST00000476215 RPL10P27635 214 aaKnown RBP7.46□□□□□ -1.22
PTCD3-211ENST00000476215 SYDE1Q6ZW31 735 aaPredicted RBP7.46□□□□□ -1.22
PTCD3-211ENST00000476215 SPATC1Q76KD6 591 aa7.46□□□□□ -1.22
PTCD3-211ENST00000476215 ARHGEF39Q8N4T4 335 aa7.46□□□□□ -1.22
PTCD3-211ENST00000476215 SLC26A8Q96RN1 970 aa7.46□□□□□ -1.22
PTCD3-211ENST00000476215 DNAJC7Q99615 494 aa7.46□□□□□ -1.22
PTCD3-211ENST00000476215 DCP1AQ9NPI6 582 aaPredicted RBP7.46□□□□□ -1.22
PTCD3-211ENST00000476215 IQCA1LA6NCM1 817 aa7.45□□□□□ -1.22
PTCD3-211ENST00000476215 HRKO00198 91 aa7.45□□□□□ -1.22
PTCD3-211ENST00000476215 ITGAVP06756 1048 aa7.45□□□□□ -1.22
PTCD3-211ENST00000476215 VAV1P15498 845 aa7.45□□□□□ -1.22
PTCD3-211ENST00000476215 SSRP1Q08945 709 aaKnown RBP7.45□□□□□ -1.22
PTCD3-211ENST00000476215 KRTAP19-4Q3LI73 84 aa7.45□□□□□ -1.22
PTCD3-211ENST00000476215 POMZP3Q6PJE2 187 aa7.45□□□□□ -1.22
PTCD3-211ENST00000476215 CRACR2BQ8N4Y2 399 aaPredicted RBP7.45□□□□□ -1.22
PTCD3-211ENST00000476215 DIRC2Q96SL1 478 aa7.45□□□□□ -1.22
PTCD3-211ENST00000476215 ZNF552Q9H707 407 aaPredicted RBP7.45□□□□□ -1.22
PTCD3-211ENST00000476215 ERVK13-1Q9NX77 482 aa7.45□□□□□ -1.22
PTCD3-211ENST00000476215 ZMYM5Q9UJ78 669 aa7.45□□□□□ -1.22
PTCD3-211ENST00000476215 EMC9Q9Y3B6 208 aa7.45□□□□□ -1.22
PTCD3-211ENST00000476215 USP2O75604 605 aaPredicted RBP7.44□□□□□ -1.22
PTCD3-211ENST00000476215 KCNH1O95259 989 aa7.44□□□□□ -1.22
PTCD3-211ENST00000476215 RTP2Q5QGT7 225 aa7.44□□□□□ -1.22
PTCD3-211ENST00000476215 ZNF227Q86WZ6 799 aa7.44□□□□□ -1.22
PTCD3-211ENST00000476215 C1QL4Q86Z23 238 aa7.44□□□□□ -1.22
PTCD3-211ENST00000476215 ZNF669Q96BR6 464 aaPredicted RBP7.44□□□□□ -1.22
PTCD3-211ENST00000476215 CD320Q9NPF0 282 aa7.44□□□□□ -1.22
PTCD3-211ENST00000476215 DIAPH1O60610 1272 aaKnown RBP7.43□□□□□ -1.22
PTCD3-211ENST00000476215 FKTNO75072 461 aa7.43□□□□□ -1.22
PTCD3-211ENST00000476215 VAMP4O75379 141 aa7.43□□□□□ -1.22
PTCD3-211ENST00000476215 RAP1GAPP47736 663 aa7.43□□□□□ -1.22
PTCD3-211ENST00000476215 AMPD2Q01433 879 aa7.43□□□□□ -1.22
PTCD3-211ENST00000476215 POU4F1Q01851 419 aa7.43□□□□□ -1.22
PTCD3-211ENST00000476215 DPY19L1Q2PZI1 675 aa7.43□□□□□ -1.22
PTCD3-211ENST00000476215 ZPBP2Q6X784 338 aa7.43□□□□□ -1.22
PTCD3-211ENST00000476215 SLCO6A1Q86UG4 719 aa7.43□□□□□ -1.22
PTCD3-211ENST00000476215 TRIM59Q8IWR1 403 aa7.43□□□□□ -1.22
PTCD3-211ENST00000476215 LRRC47Q8N1G4 583 aaKnown RBP7.43□□□□□ -1.22
PTCD3-211ENST00000476215 SGSM3Q96HU1 749 aa7.43□□□□□ -1.22
PTCD3-211ENST00000476215 GPR160Q9UJ42 338 aa7.43□□□□□ -1.22
PTCD3-211ENST00000476215 KDM2BQ8NHM5 1336 aa7.43□□□□□ -1.22
PTCD3-211ENST00000476215 KRTAP4-8A0A0G2JLE6 195 aa7.42□□□□□ -1.22
PTCD3-211ENST00000476215 A0A1W2PQU0 124 aa7.42□□□□□ -1.22
PTCD3-211ENST00000476215 TBX1O43435 398 aa7.42□□□□□ -1.22
PTCD3-211ENST00000476215 CD3EP07766 207 aa7.42□□□□□ -1.22
PTCD3-211ENST00000476215 C1QTNF9P0C862 333 aa7.42□□□□□ -1.22
PTCD3-211ENST00000476215 PNLIPP16233 465 aa7.42□□□□□ -1.22
PTCD3-211ENST00000476215 GRB10Q13322 594 aa7.42□□□□□ -1.22
PTCD3-211ENST00000476215 NOP9Q86U38 636 aaKnown RBP7.42□□□□□ -1.22
PTCD3-211ENST00000476215 TMEM52Q8NDY8 209 aa7.42□□□□□ -1.22
PTCD3-211ENST00000476215 MRGPRX3Q96LB0 322 aa7.42□□□□□ -1.22
PTCD3-211ENST00000476215 SPATA9Q9BWV2 254 aa7.42□□□□□ -1.22
PTCD3-211ENST00000476215 SLC12A9Q9BXP2 914 aa7.42□□□□□ -1.22
PTCD3-211ENST00000476215 GPR55Q9Y2T6 319 aaPredicted RBP7.42□□□□□ -1.22
PTCD3-211ENST00000476215 MYOCOSA0A1B0GUC4 107 aa7.41□□□□□ -1.22
PTCD3-211ENST00000476215 A0A1W2PQ45 241 aaPredicted RBP7.41□□□□□ -1.22
PTCD3-211ENST00000476215 A0A1W2PQY0 241 aa7.41□□□□□ -1.22
PTCD3-211ENST00000476215 SEMA7AO75326 666 aa7.41□□□□□ -1.22
PTCD3-211ENST00000476215 NOP2P46087 812 aaKnown RBP7.41□□□□□ -1.22
PTCD3-211ENST00000476215 ERVFRD-1P60508 538 aa7.41□□□□□ -1.22
PTCD3-211ENST00000476215 PPP2R2AP63151 447 aa7.41□□□□□ -1.22
PTCD3-211ENST00000476215 HSP90AA2PQ14568 343 aaPredicted RBP7.41□□□□□ -1.22
PTCD3-211ENST00000476215 HSF5Q4G112 596 aaPredicted RBP7.41□□□□□ -1.22
PTCD3-211ENST00000476215 GTF2IRD2BQ6EKJ0 949 aa7.41□□□□□ -1.22
PTCD3-211ENST00000476215 CEP128Q6ZU80 1094 aa7.41□□□□□ -1.22
PTCD3-211ENST00000476215 GTF2IRD2Q86UP8 949 aa7.41□□□□□ -1.22
PTCD3-211ENST00000476215 BTN2A2Q8WVV5 523 aa7.41□□□□□ -1.22
PTCD3-211ENST00000476215 MCOLN1Q9GZU1 580 aa7.41□□□□□ -1.22
PTCD3-211ENST00000476215 ACSL6Q9UKU0 697 aa7.41□□□□□ -1.22
PTCD3-211ENST00000476215 TEX51A0A1B0GUA7 166 aa7.4□□□□□ -1.22
PTCD3-211ENST00000476215 STXBP3O00186 592 aa7.4□□□□□ -1.22
PTCD3-211ENST00000476215 NFIBO00712 420 aa7.4□□□□□ -1.22
PTCD3-211ENST00000476215 GSTM1P09488 218 aa7.4□□□□□ -1.22
PTCD3-211ENST00000476215 IFNGR1P15260 489 aa7.4□□□□□ -1.22
PTCD3-211ENST00000476215 RTP1P59025 263 aa7.4□□□□□ -1.22
PTCD3-211ENST00000476215 YBX1P67809 324 aaKnown RBP7.4□□□□□ -1.22
PTCD3-211ENST00000476215 GALNT18Q6P9A2 607 aa7.4□□□□□ -1.22
PTCD3-211ENST00000476215 SPOCD1Q6ZMY3 1216 aa7.4□□□□□ -1.22
PTCD3-211ENST00000476215 LILRB2Q8N423 598 aa7.4□□□□□ -1.22
PTCD3-211ENST00000476215 FCRL3Q96P31 734 aaPredicted RBP7.4□□□□□ -1.22
PTCD3-211ENST00000476215 PLCD4Q9BRC7 762 aa7.4□□□□□ -1.22
PTCD3-211ENST00000476215 CDADC1Q9BWV3 514 aa7.4□□□□□ -1.22
PTCD3-211ENST00000476215 KCNK12Q9HB15 430 aa7.4□□□□□ -1.22
PTCD3-211ENST00000476215 WTIPA6NIX2 430 aaPredicted RBP7.39□□□□□ -1.23
PTCD3-211ENST00000476215 ETV2O00321 342 aaPredicted RBP7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms