RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 C6orf222P0C671 652 aaPredicted RBP8.3□□□□□ -1.08
HDAC3-207ENST00000475549 SNHG28P0DPA3 235 aa8.3□□□□□ -1.08
HDAC3-207ENST00000475549 ALAS1P13196 640 aa8.3□□□□□ -1.08
HDAC3-207ENST00000475549 SMPD1P17405 629 aa8.3□□□□□ -1.08
HDAC3-207ENST00000475549 BEX3Q00994 111 aa8.3□□□□□ -1.08
HDAC3-207ENST00000475549 RRP12Q5JTH9 1297 aaKnown RBP8.3□□□□□ -1.08
HDAC3-207ENST00000475549 GNASQ5JWF2 1037 aa8.3□□□□□ -1.08
HDAC3-207ENST00000475549 TICAM2Q86XR7 235 aa8.3□□□□□ -1.08
HDAC3-207ENST00000475549 RILPL2Q969X0 211 aa8.3□□□□□ -1.08
HDAC3-207ENST00000475549 FAM161BQ96MY7 647 aa8.3□□□□□ -1.08
HDAC3-207ENST00000475549 IL25Q9H293 177 aa8.3□□□□□ -1.08
HDAC3-207ENST00000475549 RANBP17Q9H2T7 1088 aaKnown RBP8.3□□□□□ -1.08
HDAC3-207ENST00000475549 RWDD1Q9H446 243 aaPredicted RBP8.3□□□□□ -1.08
HDAC3-207ENST00000475549 OSBPL3Q9H4L5 887 aa8.3□□□□□ -1.08
HDAC3-207ENST00000475549 STARD7Q9NQZ5 370 aa8.3□□□□□ -1.08
HDAC3-207ENST00000475549 STXBP5LQ9Y2K9 1186 aa8.3□□□□□ -1.08
HDAC3-207ENST00000475549 PARP14Q460N5 1801 aa8.3□□□□□ -1.08
HDAC3-207ENST00000475549 GRIN2DO15399 1336 aa8.29□□□□□ -1.08
HDAC3-207ENST00000475549 ELP1O95163 1332 aa8.29□□□□□ -1.08
HDAC3-207ENST00000475549 FRMPD2Q68DX3 1309 aaPredicted RBP8.29□□□□□ -1.08
HDAC3-207ENST00000475549 CCDC171Q6TFL3 1326 aa8.29□□□□□ -1.08
HDAC3-207ENST00000475549 MOXD2PA6NHM9 499 aa8.29□□□□□ -1.08
HDAC3-207ENST00000475549 TRIM6-TRIM34B2RNG4 842 aa8.29□□□□□ -1.08
HDAC3-207ENST00000475549 NFIBO00712 420 aa8.29□□□□□ -1.08
HDAC3-207ENST00000475549 PDHBP11177 359 aa8.29□□□□□ -1.08
HDAC3-207ENST00000475549 TOP1P11387 765 aaKnown RBP8.29□□□□□ -1.08
HDAC3-207ENST00000475549 TNFAIP2Q03169 654 aa8.29□□□□□ -1.08
HDAC3-207ENST00000475549 IKQ13123 557 aaPredicted RBP8.29□□□□□ -1.08
HDAC3-207ENST00000475549 BAATQ14032 418 aaPredicted RBP8.29□□□□□ -1.08
HDAC3-207ENST00000475549 TKFCQ3LXA3 575 aa8.29□□□□□ -1.08
HDAC3-207ENST00000475549 PPP4R3BQ5MIZ7 849 aa8.29□□□□□ -1.08
HDAC3-207ENST00000475549 AKNAD1Q5T1N1 836 aa8.29□□□□□ -1.08
HDAC3-207ENST00000475549 CWC27Q6UX04 472 aaKnown RBP8.29□□□□□ -1.08
HDAC3-207ENST00000475549 EEPD1Q7L9B9 569 aa8.29□□□□□ -1.08
HDAC3-207ENST00000475549 SLC43A3Q8NBI5 491 aa8.29□□□□□ -1.08
HDAC3-207ENST00000475549 MORC4Q8TE76 937 aa8.29□□□□□ -1.08
HDAC3-207ENST00000475549 NUP133Q8WUM0 1156 aa8.29□□□□□ -1.08
HDAC3-207ENST00000475549 DCAF4Q8WV16 495 aa8.29□□□□□ -1.08
HDAC3-207ENST00000475549 CLEC4DQ8WXI8 215 aa8.29□□□□□ -1.08
HDAC3-207ENST00000475549 TTC14Q96N46 770 aa8.29□□□□□ -1.08
HDAC3-207ENST00000475549 ZKSCAN3Q9BRR0 538 aa8.29□□□□□ -1.08
HDAC3-207ENST00000475549 TTYH1Q9H313 450 aaPredicted RBP8.29□□□□□ -1.08
HDAC3-207ENST00000475549 CPVLQ9H3G5 476 aa8.29□□□□□ -1.08
HDAC3-207ENST00000475549 SEMA6BQ9H3T3 888 aa8.29□□□□□ -1.08
HDAC3-207ENST00000475549 GPCPD1Q9NPB8 672 aa8.29□□□□□ -1.08
HDAC3-207ENST00000475549 TOMM22Q9NS69 142 aa8.29□□□□□ -1.08
HDAC3-207ENST00000475549 TMEM39AQ9NV64 488 aa8.29□□□□□ -1.08
HDAC3-207ENST00000475549 ZBTB47Q9UFB7 747 aaPredicted RBP8.29□□□□□ -1.08
HDAC3-207ENST00000475549 TBX21Q9UL17 535 aa8.29□□□□□ -1.08
HDAC3-207ENST00000475549 CCPG1Q9ULG6 757 aa8.29□□□□□ -1.08
HDAC3-207ENST00000475549 ISY1Q9ULR0 285 aaKnown RBP8.29□□□□□ -1.08
HDAC3-207ENST00000475549 ZMYM6O95789 1325 aa8.29□□□□□ -1.08
HDAC3-207ENST00000475549 NEDD4P46934 1319 aa8.29□□□□□ -1.08
HDAC3-207ENST00000475549 ARVCFO00192 962 aa8.28□□□□□ -1.08
HDAC3-207ENST00000475549 TIMP1P01033 207 aa8.28□□□□□ -1.08
HDAC3-207ENST00000475549 GOLGA8HP0CJ92 632 aa8.28□□□□□ -1.08
HDAC3-207ENST00000475549 RAG1P15918 1043 aa8.28□□□□□ -1.08
HDAC3-207ENST00000475549 ZNF543Q08ER8 600 aa8.28□□□□□ -1.08
HDAC3-207ENST00000475549 AAMPQ13685 434 aa8.28□□□□□ -1.08
HDAC3-207ENST00000475549 CCDC96Q2M329 555 aa8.28□□□□□ -1.08
HDAC3-207ENST00000475549 SYDE2Q5VT97 1194 aa8.28□□□□□ -1.08
HDAC3-207ENST00000475549 CXCL17Q6UXB2 119 aa8.28□□□□□ -1.08
HDAC3-207ENST00000475549 NSMFQ6X4W1 530 aa8.28□□□□□ -1.08
HDAC3-207ENST00000475549 MFSD6Q6ZSS7 791 aa8.28□□□□□ -1.08
HDAC3-207ENST00000475549 FBXO16Q8IX29 292 aaPredicted RBP8.28□□□□□ -1.08
HDAC3-207ENST00000475549 FAM126BQ8IXS8 530 aa8.28□□□□□ -1.08
HDAC3-207ENST00000475549 PCSK9Q8NBP7 692 aaKnown RBP8.28□□□□□ -1.08
HDAC3-207ENST00000475549 CDX2Q99626 313 aaPredicted RBP8.28□□□□□ -1.08
HDAC3-207ENST00000475549 RTN4Q9NQC3 1192 aaKnown RBP8.28□□□□□ -1.08
HDAC3-207ENST00000475549 PRUNE2Q8WUY3 3088 aa8.28□□□□□ -1.08
HDAC3-207ENST00000475549 ASB14A6NK59 587 aa8.27□□□□□ -1.09
HDAC3-207ENST00000475549 DCDC2CA8MYV0 355 aa8.27□□□□□ -1.09
HDAC3-207ENST00000475549 DLL1O00548 723 aa8.27□□□□□ -1.09
HDAC3-207ENST00000475549 DYNC1LI2O43237 492 aaPredicted RBP8.27□□□□□ -1.09
HDAC3-207ENST00000475549 CD4P01730 458 aa8.27□□□□□ -1.09
HDAC3-207ENST00000475549 PDE4AP27815 886 aa8.27□□□□□ -1.09
HDAC3-207ENST00000475549 SMAD3P84022 425 aaKnown RBP8.27□□□□□ -1.09
HDAC3-207ENST00000475549 FPGSQ05932 587 aa8.27□□□□□ -1.09
HDAC3-207ENST00000475549 FSCN1Q16658 493 aaKnown RBP8.27□□□□□ -1.09
HDAC3-207ENST00000475549 IQSEC1Q6DN90 963 aa8.27□□□□□ -1.09
HDAC3-207ENST00000475549 MFSD5Q6N075 450 aa8.27□□□□□ -1.09
HDAC3-207ENST00000475549 SLC30A10Q6XR72 485 aa8.27□□□□□ -1.09
HDAC3-207ENST00000475549 NOL8Q76FK4 1167 aaKnown RBP8.27□□□□□ -1.09
HDAC3-207ENST00000475549 DGKHQ86XP1 1220 aa8.27□□□□□ -1.09
HDAC3-207ENST00000475549 TBC1D5Q92609 795 aa8.27□□□□□ -1.09
HDAC3-207ENST00000475549 ANKS1AQ92625 1134 aa8.27□□□□□ -1.09
HDAC3-207ENST00000475549 VTI1AQ96AJ9 217 aa8.27□□□□□ -1.09
HDAC3-207ENST00000475549 VWCEQ96DN2 955 aa8.27□□□□□ -1.09
HDAC3-207ENST00000475549 GLT1D1Q96MS3 346 aa8.27□□□□□ -1.09
HDAC3-207ENST00000475549 UBA5Q9GZZ9 404 aa8.27□□□□□ -1.09
HDAC3-207ENST00000475549 ZSWIM5Q9P217 1185 aa8.27□□□□□ -1.09
HDAC3-207ENST00000475549 MYH7P12883 1935 aa8.27□□□□□ -1.09
HDAC3-207ENST00000475549 UMODL1Q5DID0 1318 aa8.27□□□□□ -1.09
HDAC3-207ENST00000475549 COL11A1P12107 1806 aaPredicted RBP8.26□□□□□ -1.09
HDAC3-207ENST00000475549 FRMPD3Q5JV73 1810 aa8.26□□□□□ -1.09
HDAC3-207ENST00000475549 SMCHD1A6NHR9 2005 aa8.26□□□□□ -1.09
HDAC3-207ENST00000475549 SPTBN5Q9NRC6 3674 aaKnown RBP8.26□□□□□ -1.09
HDAC3-207ENST00000475549 A0A0U1RQG5 324 aaPredicted RBP8.26□□□□□ -1.09
HDAC3-207ENST00000475549 RBM47A0AV96 593 aaKnown RBP8.26□□□□□ -1.09
HDAC3-207ENST00000475549 GRXCR1A8MXD5 290 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms