RNA–Protein interactions for RNA: ENST00000472045.1

IRF1-208, Transcript of interferon regulatory factor 1, humanhuman

TSL 2

Gene IRF1, Length 5,153 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-208ENST00000472045 FASTKD5Q7L8L6 764 aaKnown RBP13.58□□□□□ -0.24
IRF1-208ENST00000472045 TICAM2Q86XR7 235 aa13.58□□□□□ -0.24
IRF1-208ENST00000472045 TBCKQ8TEA7 893 aa13.58□□□□□ -0.24
IRF1-208ENST00000472045 KIAA1024Q9UPX6 916 aa13.58□□□□□ -0.24
IRF1-208ENST00000472045 TMEM191BP0C7N4 346 aa13.58□□□□□ -0.24
IRF1-208ENST00000472045 NLRP12P59046 1061 aa13.58□□□□□ -0.24
IRF1-208ENST00000472045 CD2APQ9Y5K6 639 aa13.58□□□□□ -0.24
IRF1-208ENST00000472045 INO80B-WBP1J3KQ70 363 aa13.58□□□□□ -0.24
IRF1-208ENST00000472045 ZSCAN20P17040 1043 aaPredicted RBP13.58□□□□□ -0.24
IRF1-208ENST00000472045 SNRNP48Q6IEG0 339 aaKnown RBP13.58□□□□□ -0.24
IRF1-208ENST00000472045 MMS19Q96T76 1030 aa13.58□□□□□ -0.24
IRF1-208ENST00000472045 INO80BQ9C086 356 aaPredicted RBP13.58□□□□□ -0.24
IRF1-208ENST00000472045 XPOTO43592 962 aaKnown RBP13.58□□□□□ -0.24
IRF1-208ENST00000472045 NKX1-1Q15270 411 aaPredicted RBP13.58□□□□□ -0.24
IRF1-208ENST00000472045 ADALQ6DHV7 355 aa13.58□□□□□ -0.24
IRF1-208ENST00000472045 ARMCX5Q6P1M9 558 aa13.58□□□□□ -0.24
IRF1-208ENST00000472045 FBXO18Q8NFZ0 1043 aa13.58□□□□□ -0.24
IRF1-208ENST00000472045 HERC5Q9UII4 1024 aaKnown RBP13.58□□□□□ -0.24
IRF1-208ENST00000472045 NUB1Q9Y5A7 615 aa13.58□□□□□ -0.24
IRF1-208ENST00000472045 DCUN1D2Q6PH85 259 aa13.57□□□□□ -0.24
IRF1-208ENST00000472045 CEP170P1Q96L14 293 aa13.57□□□□□ -0.24
IRF1-208ENST00000472045 FOXP1Q9H334 677 aaPredicted RBP13.57□□□□□ -0.24
IRF1-208ENST00000472045 DCP1AQ9NPI6 582 aaPredicted RBP13.57□□□□□ -0.24
IRF1-208ENST00000472045 HOXA13P31271 388 aaPredicted RBP13.57□□□□□ -0.24
IRF1-208ENST00000472045 ODR4Q5SWX8 454 aa13.57□□□□□ -0.24
IRF1-208ENST00000472045 SIRT2Q8IXJ6 389 aa13.57□□□□□ -0.24
IRF1-208ENST00000472045 RAVER2Q9HCJ3 691 aaKnown RBP13.57□□□□□ -0.24
IRF1-208ENST00000472045 TAB2Q9NYJ8 693 aa13.57□□□□□ -0.24
IRF1-208ENST00000472045 RIPOR2Q9Y4F9 1068 aa13.57□□□□□ -0.24
IRF1-208ENST00000472045 PSAPP07602 524 aa13.57□□□□□ -0.24
IRF1-208ENST00000472045 MYL3P08590 195 aa13.57□□□□□ -0.24
IRF1-208ENST00000472045 PFKFB1P16118 471 aa13.57□□□□□ -0.24
IRF1-208ENST00000472045 SEL1L2Q5TEA6 688 aa13.57□□□□□ -0.24
IRF1-208ENST00000472045 MAATS1Q7Z4T9 603 aa13.57□□□□□ -0.24
IRF1-208ENST00000472045 PI4K2BQ8TCG2 481 aa13.57□□□□□ -0.24
IRF1-208ENST00000472045 USP28Q96RU2 1077 aa13.57□□□□□ -0.24
IRF1-208ENST00000472045 RIOK1Q9BRS2 568 aaKnown RBP13.57□□□□□ -0.24
IRF1-208ENST00000472045 NUP58Q9BVL2 599 aa13.57□□□□□ -0.24
IRF1-208ENST00000472045 MTUS1Q9ULD2 1270 aa13.57□□□□□ -0.24
IRF1-208ENST00000472045 XRCC5P13010 732 aaKnown RBP13.57□□□□□ -0.24
IRF1-208ENST00000472045 UBE2SQ16763 222 aa13.57□□□□□ -0.24
IRF1-208ENST00000472045 SLC17A8Q8NDX2 589 aa13.57□□□□□ -0.24
IRF1-208ENST00000472045 TSGA10Q9BZW7 698 aa13.57□□□□□ -0.24
IRF1-208ENST00000472045 ELP3Q9H9T3 547 aa13.57□□□□□ -0.24
IRF1-208ENST00000472045 NTSR2O95665 410 aa13.56□□□□□ -0.24
IRF1-208ENST00000472045 GAS8O95995 478 aa13.56□□□□□ -0.24
IRF1-208ENST00000472045 LIFRP42702 1097 aa13.56□□□□□ -0.24
IRF1-208ENST00000472045 RBM10P98175 930 aaKnown RBP13.56□□□□□ -0.24
IRF1-208ENST00000472045 MAP2K1Q02750 393 aaPredicted RBP13.56□□□□□ -0.24
IRF1-208ENST00000472045 COL23A1Q86Y22 540 aaPredicted RBP13.56□□□□□ -0.24
IRF1-208ENST00000472045 IPO4Q8TEX9 1081 aaKnown RBP13.56□□□□□ -0.24
IRF1-208ENST00000472045 STAG1Q8WVM7 1258 aa13.56□□□□□ -0.24
IRF1-208ENST00000472045 DNAI1Q9UI46 699 aa13.56□□□□□ -0.24
IRF1-208ENST00000472045 NFE2L3Q9Y4A8 694 aa13.56□□□□□ -0.24
IRF1-208ENST00000472045 CTAGE15A4D2H0 777 aa13.56□□□□□ -0.24
IRF1-208ENST00000472045 CTAGE9A4FU28 777 aa13.56□□□□□ -0.24
IRF1-208ENST00000472045 PRPF3O43395 683 aaKnown RBP13.56□□□□□ -0.24
IRF1-208ENST00000472045 CTAGE8P0CG41 777 aa13.56□□□□□ -0.24
IRF1-208ENST00000472045 LRMPQ12912 555 aa13.56□□□□□ -0.24
IRF1-208ENST00000472045 RSBN1LQ6PCB5 846 aaPredicted RBP13.56□□□□□ -0.24
IRF1-208ENST00000472045 CTAGE6Q86UF2 777 aa13.56□□□□□ -0.24
IRF1-208ENST00000472045 CTAGE4Q8IX94 777 aa13.56□□□□□ -0.24
IRF1-208ENST00000472045 NLRP7Q8WX94 980 aa13.56□□□□□ -0.24
IRF1-208ENST00000472045 RNF216Q9NWF9 866 aaPredicted RBP13.56□□□□□ -0.24
IRF1-208ENST00000472045 PARP2Q9UGN5 583 aa13.56□□□□□ -0.24
IRF1-208ENST00000472045 HNRNPDLO14979 420 aaKnown RBP13.56□□□□□ -0.24
IRF1-208ENST00000472045 ARL1P40616 181 aaPredicted RBP13.56□□□□□ -0.24
IRF1-208ENST00000472045 RNASELQ05823 741 aaKnown RBP13.56□□□□□ -0.24
IRF1-208ENST00000472045 PNOCQ13519 176 aa13.56□□□□□ -0.24
IRF1-208ENST00000472045 RASA3Q14644 834 aa13.56□□□□□ -0.24
IRF1-208ENST00000472045 GMPSP49915 693 aaPredicted RBP13.56□□□□□ -0.24
IRF1-208ENST00000472045 ZNF157P51786 506 aaPredicted RBP13.56□□□□□ -0.24
IRF1-208ENST00000472045 FAM26FQ5R3K3 315 aa13.56□□□□□ -0.24
IRF1-208ENST00000472045 PDXDC2PQ6P474 469 aa13.56□□□□□ -0.24
IRF1-208ENST00000472045 SRRTQ9BXP5 876 aaKnown RBP13.56□□□□□ -0.24
IRF1-208ENST00000472045 ZBTB12Q9Y330 459 aaPredicted RBP13.56□□□□□ -0.24
IRF1-208ENST00000472045 IFNAR1P17181 557 aa13.55□□□□□ -0.24
IRF1-208ENST00000472045 ARHGAP44Q17R89 818 aa13.55□□□□□ -0.24
IRF1-208ENST00000472045 CCDC84Q86UT8 332 aaPredicted RBP13.55□□□□□ -0.24
IRF1-208ENST00000472045 SLC44A5Q8NCS7 719 aa13.55□□□□□ -0.24
IRF1-208ENST00000472045 POMGNT1Q8WZA1 660 aa13.55□□□□□ -0.24
IRF1-208ENST00000472045 NACC1Q96RE7 527 aa13.55□□□□□ -0.24
IRF1-208ENST00000472045 RGS12O14924 1447 aa13.55□□□□□ -0.24
IRF1-208ENST00000472045 TLR3O15455 904 aaKnown RBP13.55□□□□□ -0.24
IRF1-208ENST00000472045 LMNB1P20700 586 aa13.55□□□□□ -0.24
IRF1-208ENST00000472045 STXBP2Q15833 593 aa13.55□□□□□ -0.24
IRF1-208ENST00000472045 SLC9C1Q4G0N8 1177 aa13.55□□□□□ -0.24
IRF1-208ENST00000472045 MFSD14CQ5VZR4 134 aa13.55□□□□□ -0.24
IRF1-208ENST00000472045 PPP1R14CQ8TAE6 165 aa13.55□□□□□ -0.24
IRF1-208ENST00000472045 LZTFL1Q9NQ48 299 aa13.55□□□□□ -0.24
IRF1-208ENST00000472045 GGA3Q9NZ52 723 aa13.55□□□□□ -0.24
IRF1-208ENST00000472045 ABL1P00519 1130 aa13.55□□□□□ -0.24
IRF1-208ENST00000472045 DLATP10515 647 aaKnown RBP13.55□□□□□ -0.24
IRF1-208ENST00000472045 ANGEL2Q5VTE6 544 aaKnown RBP13.55□□□□□ -0.24
IRF1-208ENST00000472045 PNMA8AQ86V59 439 aaPredicted RBP13.55□□□□□ -0.24
IRF1-208ENST00000472045 ST7Q9NRC1 585 aa13.55□□□□□ -0.24
IRF1-208ENST00000472045 N4BP1O75113 896 aaKnown RBP13.55□□□□□ -0.24
IRF1-208ENST00000472045 MTERF2Q49AM1 385 aa13.55□□□□□ -0.24
IRF1-208ENST00000472045 RCSD1Q6JBY9 416 aa13.55□□□□□ -0.24
IRF1-208ENST00000472045 CCDC155Q8N6L0 562 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms