RNA–Protein interactions for RNA: ENST00000471047.1

CLK2-204, Transcript of CDC like kinase 2, humanhuman

TSL 3

Gene CLK2, Length 701 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-204ENST00000471047 NUP88Q99567 741 aaPredicted RBP11.33□□□□□ -0.6
CLK2-204ENST00000471047 COL25A1Q9BXS0 654 aaPredicted RBP11.33□□□□□ -0.6
CLK2-204ENST00000471047 FOXP1Q9H334 677 aaPredicted RBP11.33□□□□□ -0.6
CLK2-204ENST00000471047 AS3MTQ9HBK9 375 aa11.33□□□□□ -0.6
CLK2-204ENST00000471047 PICK1Q9NRD5 415 aa11.33□□□□□ -0.6
CLK2-204ENST00000471047 CSADQ9Y600 493 aa11.33□□□□□ -0.6
CLK2-204ENST00000471047 SNCAIPQ9Y6H5 919 aa11.33□□□□□ -0.6
CLK2-204ENST00000471047 VCANP13611 3396 aa11.33□□□□□ -0.6
CLK2-204ENST00000471047 SPDYE5A6NIY4 337 aa11.32□□□□□ -0.6
CLK2-204ENST00000471047 BTBD18B2RXH4 712 aa11.32□□□□□ -0.6
CLK2-204ENST00000471047 USP17L10C9JJH3 530 aa11.32□□□□□ -0.6
CLK2-204ENST00000471047 TMEM232C9JQI7 657 aa11.32□□□□□ -0.6
CLK2-204ENST00000471047 IRF6O14896 467 aa11.32□□□□□ -0.6
CLK2-204ENST00000471047 ZBTB5O15062 677 aa11.32□□□□□ -0.6
CLK2-204ENST00000471047 CETPP11597 493 aa11.32□□□□□ -0.6
CLK2-204ENST00000471047 SLC16A2P36021 539 aa11.32□□□□□ -0.6
CLK2-204ENST00000471047 STAT2P52630 851 aa11.32□□□□□ -0.6
CLK2-204ENST00000471047 BACE1P56817 501 aa11.32□□□□□ -0.6
CLK2-204ENST00000471047 SAFBQ15424 915 aaKnown RBP eCLIP11.32□□□□□ -0.6
CLK2-204ENST00000471047 FAM83BQ5T0W9 1011 aa11.32□□□□□ -0.6
CLK2-204ENST00000471047 SPICE1Q8N0Z3 855 aa11.32□□□□□ -0.6
CLK2-204ENST00000471047 DEFB123Q8N688 67 aa11.32□□□□□ -0.6
CLK2-204ENST00000471047 DAGLBQ8NCG7 672 aa11.32□□□□□ -0.6
CLK2-204ENST00000471047 ZNF280CQ8ND82 737 aa11.32□□□□□ -0.6
CLK2-204ENST00000471047 PIBF1Q8WXW3 757 aa11.32□□□□□ -0.6
CLK2-204ENST00000471047 GPKOWQ92917 476 aaPredicted RBP eCLIP11.32□□□□□ -0.6
CLK2-204ENST00000471047 TNFRSF25Q93038 417 aa11.32□□□□□ -0.6
CLK2-204ENST00000471047 C12orf42Q96LP6 360 aa11.32□□□□□ -0.6
CLK2-204ENST00000471047 UNC93B1Q9H1C4 597 aa11.32□□□□□ -0.6
CLK2-204ENST00000471047 VAT1LQ9HCJ6 419 aa11.32□□□□□ -0.6
CLK2-204ENST00000471047 BIN2Q9UBW5 565 aaPredicted RBP11.32□□□□□ -0.6
CLK2-204ENST00000471047 SEC63Q9UGP8 760 aaKnown RBP11.32□□□□□ -0.6
CLK2-204ENST00000471047 AFG3L2Q9Y4W6 797 aa11.32□□□□□ -0.6
CLK2-204ENST00000471047 EYSQ5T1H1 3165 aa11.31□□□□□ -0.6
CLK2-204ENST00000471047 ESYT2A0FGR8 921 aa11.31□□□□□ -0.6
CLK2-204ENST00000471047 C19orf81C9J6K1 198 aa11.31□□□□□ -0.6
CLK2-204ENST00000471047 M0R2N6 131 aa11.31□□□□□ -0.6
CLK2-204ENST00000471047 WDR46O15213 610 aaKnown RBP11.31□□□□□ -0.6
CLK2-204ENST00000471047 RAD21O60216 631 aa11.31□□□□□ -0.6
CLK2-204ENST00000471047 EVI5O60447 810 aa11.31□□□□□ -0.6
CLK2-204ENST00000471047 PPP1R11O60927 126 aaPredicted RBP11.31□□□□□ -0.6
CLK2-204ENST00000471047 PTMSP20962 102 aa11.31□□□□□ -0.6
CLK2-204ENST00000471047 CALML3P27482 149 aa11.31□□□□□ -0.6
CLK2-204ENST00000471047 USP14P54578 494 aa11.31□□□□□ -0.6
CLK2-204ENST00000471047 KRT85P78386 507 aa11.31□□□□□ -0.6
CLK2-204ENST00000471047 SPP2Q13103 211 aa11.31□□□□□ -0.6
CLK2-204ENST00000471047 ZYXQ15942 572 aaKnown RBP11.31□□□□□ -0.6
CLK2-204ENST00000471047 FOXD4L6Q3SYB3 417 aaPredicted RBP11.31□□□□□ -0.6
CLK2-204ENST00000471047 SH3D19Q5HYK7 790 aa11.31□□□□□ -0.6
CLK2-204ENST00000471047 SYDE2Q5VT97 1194 aa11.31□□□□□ -0.6
CLK2-204ENST00000471047 MYSM1Q5VVJ2 828 aa11.31□□□□□ -0.6
CLK2-204ENST00000471047 GALNT17Q6IS24 598 aa11.31□□□□□ -0.6
CLK2-204ENST00000471047 FOXD4L3Q6VB84 417 aaPredicted RBP11.31□□□□□ -0.6
CLK2-204ENST00000471047 HEATR3Q7Z4Q2 680 aa11.31□□□□□ -0.6
CLK2-204ENST00000471047 FAM160B2Q86V87 743 aa11.31□□□□□ -0.6
CLK2-204ENST00000471047 HOMER1Q86YM7 354 aa11.31□□□□□ -0.6
CLK2-204ENST00000471047 NOSTRINQ8IVI9 506 aa11.31□□□□□ -0.6
CLK2-204ENST00000471047 CCDC148Q8NFR7 591 aa11.31□□□□□ -0.6
CLK2-204ENST00000471047 OXER1Q8TDS5 423 aa11.31□□□□□ -0.6
CLK2-204ENST00000471047 FEZ1Q99689 392 aa11.31□□□□□ -0.6
CLK2-204ENST00000471047 ZMYND12Q9H0C1 365 aa11.31□□□□□ -0.6
CLK2-204ENST00000471047 EMILIN3Q9NT22 766 aa11.31□□□□□ -0.6
CLK2-204ENST00000471047 LMBRD1Q9NUN5 540 aa11.31□□□□□ -0.6
CLK2-204ENST00000471047 FEM1BQ9UK73 627 aa11.31□□□□□ -0.6
CLK2-204ENST00000471047 PRR12Q9ULL5 1215 aa11.31□□□□□ -0.6
CLK2-204ENST00000471047 CNPY2Q9Y2B0 182 aa11.31□□□□□ -0.6
CLK2-204ENST00000471047 ZHX2Q9Y6X8 837 aa11.31□□□□□ -0.6
CLK2-204ENST00000471047 LAMA2P24043 3122 aaKnown RBP11.31□□□□□ -0.6
CLK2-204ENST00000471047 MYPNQ86TC9 1320 aa11.31□□□□□ -0.6
CLK2-204ENST00000471047 PTPRFP10586 1907 aa11.31□□□□□ -0.6
CLK2-204ENST00000471047 PARP14Q460N5 1801 aa11.3□□□□□ -0.6
CLK2-204ENST00000471047 GOLGA6L22H0YM25 854 aa11.3□□□□□ -0.6
CLK2-204ENST00000471047 KRT2P35908 639 aa11.3□□□□□ -0.6
CLK2-204ENST00000471047 NLRP5P59047 1200 aa11.3□□□□□ -0.6
CLK2-204ENST00000471047 PRKCZQ05513 592 aa11.3□□□□□ -0.6
CLK2-204ENST00000471047 NR5A1Q13285 461 aa11.3□□□□□ -0.6
CLK2-204ENST00000471047 SNAPC2Q13487 334 aa11.3□□□□□ -0.6
CLK2-204ENST00000471047 MTMR2Q13614 643 aa11.3□□□□□ -0.6
CLK2-204ENST00000471047 QRICH1Q2TAL8 776 aa11.3□□□□□ -0.6
CLK2-204ENST00000471047 PPP1R18Q6NYC8 613 aa11.3□□□□□ -0.6
CLK2-204ENST00000471047 ERO1BQ86YB8 467 aa11.3□□□□□ -0.6
CLK2-204ENST00000471047 CCDC12Q8WUD4 166 aaPredicted RBP11.3□□□□□ -0.6
CLK2-204ENST00000471047 CHURC1Q8WUH1 139 aa11.3□□□□□ -0.6
CLK2-204ENST00000471047 ZNF396Q96N95 335 aaPredicted RBP11.3□□□□□ -0.6
CLK2-204ENST00000471047 ZCCHC17Q9NP64 241 aaKnown RBP11.3□□□□□ -0.6
CLK2-204ENST00000471047 CFAP45Q9UL16 551 aa11.3□□□□□ -0.6
CLK2-204ENST00000471047 PCDHA4Q9UN74 947 aa11.3□□□□□ -0.6
CLK2-204ENST00000471047 STXBP5LQ9Y2K9 1186 aa11.3□□□□□ -0.6
CLK2-204ENST00000471047 ELP1O95163 1332 aa11.3□□□□□ -0.6
CLK2-204ENST00000471047 ADGRA2Q96PE1 1338 aa11.3□□□□□ -0.6
CLK2-204ENST00000471047 RLFQ13129 1914 aa11.29□□□□□ -0.6
CLK2-204ENST00000471047 LOC285556D6RIA3 1793 aa11.29□□□□□ -0.6
CLK2-204ENST00000471047 TRIM75PA6NK02 468 aa11.29□□□□□ -0.6
CLK2-204ENST00000471047 ADAMTS3O15072 1205 aa11.29□□□□□ -0.6
CLK2-204ENST00000471047 PRPF40AO75400 957 aaKnown RBP11.29□□□□□ -0.6
CLK2-204ENST00000471047 VCAM1P19320 739 aa11.29□□□□□ -0.6
CLK2-204ENST00000471047 NAPAP54920 295 aa11.29□□□□□ -0.6
CLK2-204ENST00000471047 UBXN2AP68543 259 aa11.29□□□□□ -0.6
CLK2-204ENST00000471047 GNL2Q13823 731 aaKnown RBP11.29□□□□□ -0.6
CLK2-204ENST00000471047 CDC37Q16543 378 aaPredicted RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms