RNA–Protein interactions for RNA: ENST00000470463.1

SND1-208, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-208ENST00000470463 SAMD3Q8N6K7 520 aa12.47□□□□□ -0.41
SND1-208ENST00000470463 TRIML1Q8N9V2 468 aa12.47□□□□□ -0.41
SND1-208ENST00000470463 IQUBQ8NA54 791 aa12.47□□□□□ -0.41
SND1-208ENST00000470463 TBCKQ8TEA7 893 aa12.47□□□□□ -0.41
SND1-208ENST00000470463 COA7Q96BR5 231 aa12.47□□□□□ -0.41
SND1-208ENST00000470463 CLIC6Q96NY7 704 aa12.47□□□□□ -0.41
SND1-208ENST00000470463 CPVLQ9H3G5 476 aa12.47□□□□□ -0.41
SND1-208ENST00000470463 EHMT1Q9H9B1 1298 aa12.47□□□□□ -0.41
SND1-208ENST00000470463 MAGEF1Q9HAY2 307 aa12.47□□□□□ -0.41
SND1-208ENST00000470463 PICK1Q9NRD5 415 aa12.47□□□□□ -0.41
SND1-208ENST00000470463 MRVI1Q9Y6F6 885 aa12.47□□□□□ -0.41
SND1-208ENST00000470463 SHTN1A0MZ66 631 aa12.46□□□□□ -0.41
SND1-208ENST00000470463 FAM205CA6NFA0 338 aa12.46□□□□□ -0.41
SND1-208ENST00000470463 SLC26A4O43511 780 aa12.46□□□□□ -0.41
SND1-208ENST00000470463 CCNT1O60563 726 aaKnown RBP12.46□□□□□ -0.41
SND1-208ENST00000470463 SMC2O95347 1197 aa12.46□□□□□ -0.41
SND1-208ENST00000470463 MYL1P05976 194 aa12.46□□□□□ -0.41
SND1-208ENST00000470463 OR52Z1P0C646 297 aa12.46□□□□□ -0.41
SND1-208ENST00000470463 SLFN14P0C7P3 912 aa12.46□□□□□ -0.41
SND1-208ENST00000470463 ZNF165P49910 485 aa12.46□□□□□ -0.41
SND1-208ENST00000470463 TPM4P67936 248 aa12.46□□□□□ -0.41
SND1-208ENST00000470463 TMEM266Q2M3C6 531 aa12.46□□□□□ -0.41
SND1-208ENST00000470463 ANGEL2Q5VTE6 544 aaKnown RBP12.46□□□□□ -0.41
SND1-208ENST00000470463 SCYL3Q8IZE3 742 aa12.46□□□□□ -0.41
SND1-208ENST00000470463 PPP1R9BQ96SB3 815 aa12.46□□□□□ -0.41
SND1-208ENST00000470463 BPIFA3Q9BQP9 254 aa12.46□□□□□ -0.41
SND1-208ENST00000470463 WDR18Q9BV38 432 aa12.46□□□□□ -0.41
SND1-208ENST00000470463 GTPBP4Q9BZE4 634 aaKnown RBP12.46□□□□□ -0.41
SND1-208ENST00000470463 MAF1Q9H063 256 aa12.46□□□□□ -0.41
SND1-208ENST00000470463 CUEDC2Q9H467 287 aa12.46□□□□□ -0.41
SND1-208ENST00000470463 CREBZFQ9NS37 354 aa12.46□□□□□ -0.41
SND1-208ENST00000470463 CCDC39Q9UFE4 941 aa12.46□□□□□ -0.41
SND1-208ENST00000470463 DACH1Q9UI36 760 aa12.46□□□□□ -0.41
SND1-208ENST00000470463 TUBE1Q9UJT0 475 aa12.46□□□□□ -0.41
SND1-208ENST00000470463 MRPL11Q9Y3B7 192 aaKnown RBP12.46□□□□□ -0.41
SND1-208ENST00000470463 RABGAP1Q9Y3P9 1069 aa12.46□□□□□ -0.41
SND1-208ENST00000470463 VWA3AA6NCI4 1184 aa12.45□□□□□ -0.42
SND1-208ENST00000470463 C19orf81C9J6K1 198 aa12.45□□□□□ -0.42
SND1-208ENST00000470463 GOLGA6L19H0YKK7 550 aa12.45□□□□□ -0.42
SND1-208ENST00000470463 PIK3CDO00329 1044 aa12.45□□□□□ -0.42
SND1-208ENST00000470463 POLR2DO15514 142 aaKnown RBP12.45□□□□□ -0.42
SND1-208ENST00000470463 SLURP2P0DP57 97 aa12.45□□□□□ -0.42
SND1-208ENST00000470463 ECE1P42892 770 aa12.45□□□□□ -0.42
SND1-208ENST00000470463 JAG1P78504 1218 aa12.45□□□□□ -0.42
SND1-208ENST00000470463 LETM2Q2VYF4 491 aa12.45□□□□□ -0.42
SND1-208ENST00000470463 ANO6Q4KMQ2 910 aa12.45□□□□□ -0.42
SND1-208ENST00000470463 HS1BP3Q53T59 392 aa12.45□□□□□ -0.42
SND1-208ENST00000470463 NOL9Q5SY16 702 aaKnown RBP12.45□□□□□ -0.42
SND1-208ENST00000470463 C4orf32Q8N8J7 132 aa12.45□□□□□ -0.42
SND1-208ENST00000470463 PRPF38AQ8NAV1 312 aaKnown RBP12.45□□□□□ -0.42
SND1-208ENST00000470463 RNF214Q8ND24 703 aa12.45□□□□□ -0.42
SND1-208ENST00000470463 RASGRP4Q8TDF6 673 aa12.45□□□□□ -0.42
SND1-208ENST00000470463 ZC3H15Q8WU90 426 aaKnown RBP12.45□□□□□ -0.42
SND1-208ENST00000470463 SYMPKQ92797 1274 aaKnown RBP12.45□□□□□ -0.42
SND1-208ENST00000470463 DCPSQ96C86 337 aaKnown RBP12.45□□□□□ -0.42
SND1-208ENST00000470463 TRIM44Q96DX7 344 aaPredicted RBP12.45□□□□□ -0.42
SND1-208ENST00000470463 CCSER1Q9C0I3 900 aa12.45□□□□□ -0.42
SND1-208ENST00000470463 RANBP17Q9H2T7 1088 aaKnown RBP12.45□□□□□ -0.42
SND1-208ENST00000470463 MAP3K20Q9NYL2 800 aaKnown RBP12.45□□□□□ -0.42
SND1-208ENST00000470463 BIN2Q9UBW5 565 aaPredicted RBP12.45□□□□□ -0.42
SND1-208ENST00000470463 PRR12Q9ULL5 1215 aa12.45□□□□□ -0.42
SND1-208ENST00000470463 STK24Q9Y6E0 443 aa12.45□□□□□ -0.42
SND1-208ENST00000470463 SBF1O95248 1867 aa12.44□□□□□ -0.42
SND1-208ENST00000470463 ABCB11O95342 1321 aa12.44□□□□□ -0.42
SND1-208ENST00000470463 SPDYE3A6NKU9 549 aa12.44□□□□□ -0.42
SND1-208ENST00000470463 SMTNL1A8MU46 457 aa12.44□□□□□ -0.42
SND1-208ENST00000470463 BECN2A8MW95 431 aa12.44□□□□□ -0.42
SND1-208ENST00000470463 PPP1R11O60927 126 aaPredicted RBP12.44□□□□□ -0.42
SND1-208ENST00000470463 EGFRP00533 1210 aa12.44□□□□□ -0.42
SND1-208ENST00000470463 UBA7P41226 1012 aa12.44□□□□□ -0.42
SND1-208ENST00000470463 NLRP12P59046 1061 aa12.44□□□□□ -0.42
SND1-208ENST00000470463 PDIA5Q14554 519 aa12.44□□□□□ -0.42
SND1-208ENST00000470463 POSTNQ15063 836 aa12.44□□□□□ -0.42
SND1-208ENST00000470463 LONRF3Q496Y0 759 aa12.44□□□□□ -0.42
SND1-208ENST00000470463 FAM83BQ5T0W9 1011 aa12.44□□□□□ -0.42
SND1-208ENST00000470463 NT5DC1Q5TFE4 455 aa12.44□□□□□ -0.42
SND1-208ENST00000470463 JAKMIP3Q5VZ66 844 aa12.44□□□□□ -0.42
SND1-208ENST00000470463 USP50Q70EL3 339 aaPredicted RBP12.44□□□□□ -0.42
SND1-208ENST00000470463 ACER1Q8TDN7 264 aa12.44□□□□□ -0.42
SND1-208ENST00000470463 L3MBTL3Q96JM7 780 aaPredicted RBP12.44□□□□□ -0.42
SND1-208ENST00000470463 GGA3Q9NZ52 723 aa12.44□□□□□ -0.42
SND1-208ENST00000470463 TBX3O15119 743 aa12.43□□□□□ -0.42
SND1-208ENST00000470463 HOXA7P31268 230 aaPredicted RBP12.43□□□□□ -0.42
SND1-208ENST00000470463 NF2P35240 595 aa12.43□□□□□ -0.42
SND1-208ENST00000470463 FXR2P51116 673 aaKnown RBP eCLIP12.43□□□□□ -0.428e-13■□□□□ 11.2
SND1-208ENST00000470463 CALCRLQ16602 461 aa12.43□□□□□ -0.42
SND1-208ENST00000470463 SHROOM1Q2M3G4 852 aaPredicted RBP12.43□□□□□ -0.42
SND1-208ENST00000470463 NBPF12Q5TAG4 269 aaPredicted RBP12.43□□□□□ -0.42
SND1-208ENST00000470463 CHADLQ6NUI6 762 aa12.43□□□□□ -0.42
SND1-208ENST00000470463 SULF1Q8IWU6 871 aa12.43□□□□□ -0.42
SND1-208ENST00000470463 SLFN12Q8IYM2 578 aa12.43□□□□□ -0.42
SND1-208ENST00000470463 SPICE1Q8N0Z3 855 aa12.43□□□□□ -0.42
SND1-208ENST00000470463 TRPM4Q8TD43 1214 aa12.43□□□□□ -0.42
SND1-208ENST00000470463 SMARCE1Q969G3 411 aa12.43□□□□□ -0.42
SND1-208ENST00000470463 PDLIM2Q96JY6 352 aa12.43□□□□□ -0.42
SND1-208ENST00000470463 GSDMAQ96QA5 445 aa12.43□□□□□ -0.42
SND1-208ENST00000470463 NUP88Q99567 741 aaPredicted RBP12.43□□□□□ -0.42
SND1-208ENST00000470463 PRDM10Q9NQV6 1147 aa12.43□□□□□ -0.42
SND1-208ENST00000470463 WDR90Q96KV7 1748 aa12.42□□□□□ -0.42
SND1-208ENST00000470463 CYP3A7-CYP3A51PA0A087WV96 503 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms