RNA–Protein interactions for RNA: ENST00000470170.1

COL11A1-208, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 785 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-208ENST00000470170 A0A1W2PQ27 194 aa8.9□□□□□ -0.98
COL11A1-208ENST00000470170 A0A1W2PQ64 194 aa8.9□□□□□ -0.98
COL11A1-208ENST00000470170 A0A1W2PQC6 194 aa8.9□□□□□ -0.98
COL11A1-208ENST00000470170 A0A1W2PQD8 194 aa8.9□□□□□ -0.98
COL11A1-208ENST00000470170 OLFML2BQ68BL8 750 aa8.9□□□□□ -0.98
COL11A1-208ENST00000470170 TMC6Q7Z403 805 aa8.9□□□□□ -0.98
COL11A1-208ENST00000470170 ADAT2Q7Z6V5 191 aaKnown RBP8.9□□□□□ -0.98
COL11A1-208ENST00000470170 PTCHD1Q96NR3 888 aa8.9□□□□□ -0.98
COL11A1-208ENST00000470170 MCMBPQ9BTE3 642 aa8.9□□□□□ -0.98
COL11A1-208ENST00000470170 GBP3Q9H0R5 595 aa8.9□□□□□ -0.98
COL11A1-208ENST00000470170 CCSER2Q9H7U1 834 aa8.9□□□□□ -0.98
COL11A1-208ENST00000470170 ABLIM1O14639 778 aa8.89□□□□□ -0.99
COL11A1-208ENST00000470170 PI3P19957 117 aa8.89□□□□□ -0.99
COL11A1-208ENST00000470170 CDR1P51861 262 aa8.89□□□□□ -0.99
COL11A1-208ENST00000470170 RPTNQ6XPR3 784 aa8.89□□□□□ -0.99
COL11A1-208ENST00000470170 SEC16BQ96JE7 1060 aa8.89□□□□□ -0.99
COL11A1-208ENST00000470170 STXBP3O00186 592 aa8.88□□□□□ -0.99
COL11A1-208ENST00000470170 N4BP3O15049 544 aa8.88□□□□□ -0.99
COL11A1-208ENST00000470170 VAMP4O75379 141 aa8.88□□□□□ -0.99
COL11A1-208ENST00000470170 PANK1Q8TE04 598 aa8.88□□□□□ -0.99
COL11A1-208ENST00000470170 SIGLEC10Q96LC7 697 aa8.88□□□□□ -0.99
COL11A1-208ENST00000470170 IRAK3Q9Y616 596 aa8.88□□□□□ -0.99
COL11A1-208ENST00000470170 PPM1BO75688 479 aa8.87□□□□□ -0.99
COL11A1-208ENST00000470170 CASP7P55210 303 aa8.87□□□□□ -0.99
COL11A1-208ENST00000470170 DPY19L1Q2PZI1 675 aa8.87□□□□□ -0.99
COL11A1-208ENST00000470170 ZNF385BQ569K4 471 aa8.87□□□□□ -0.99
COL11A1-208ENST00000470170 KIAA1211LQ6NV74 962 aa8.87□□□□□ -0.99
COL11A1-208ENST00000470170 ANAPC16Q96DE5 110 aa8.87□□□□□ -0.99
COL11A1-208ENST00000470170 CGGBP1Q9UFW8 167 aaPredicted RBP8.87□□□□□ -0.99
COL11A1-208ENST00000470170 SUSD2Q9UGT4 822 aa8.87□□□□□ -0.99
COL11A1-208ENST00000470170 RFXAPO00287 272 aa8.86□□□□□ -0.99
COL11A1-208ENST00000470170 TBC1D8O95759 1140 aa8.86□□□□□ -0.99
COL11A1-208ENST00000470170 TACR1P25103 407 aa8.86□□□□□ -0.99
COL11A1-208ENST00000470170 TMEM62Q0P6H9 643 aa8.86□□□□□ -0.99
COL11A1-208ENST00000470170 PLEKHN1Q494U1 663 aaPredicted RBP8.86□□□□□ -0.99
COL11A1-208ENST00000470170 VHLLQ6RSH7 139 aa8.86□□□□□ -0.99
COL11A1-208ENST00000470170 MZB1Q8WU39 189 aa8.86□□□□□ -0.99
COL11A1-208ENST00000470170 AURKAO14965 403 aa8.85□□□□□ -0.99
COL11A1-208ENST00000470170 BICRALQ6AI39 1079 aa8.85□□□□□ -0.99
COL11A1-208ENST00000470170 RCSD1Q6JBY9 416 aa8.85□□□□□ -0.99
COL11A1-208ENST00000470170 LDHDQ86WU2 507 aa8.85□□□□□ -0.99
COL11A1-208ENST00000470170 EPB41L4AQ9HCS5 686 aaPredicted RBP8.85□□□□□ -0.99
COL11A1-208ENST00000470170 SUGT1Q9Y2Z0 365 aa8.85□□□□□ -0.99
COL11A1-208ENST00000470170 A0A1W2PQJ5 194 aa8.84□□□□□ -0.99
COL11A1-208ENST00000470170 IRS4O14654 1257 aaPredicted RBP8.84□□□□□ -0.99
COL11A1-208ENST00000470170 DBHP09172 617 aa8.84□□□□□ -0.99
COL11A1-208ENST00000470170 INHBBP09529 407 aa8.84□□□□□ -0.99
COL11A1-208ENST00000470170 L1CAMP32004 1257 aa8.84□□□□□ -0.99
COL11A1-208ENST00000470170 NCKAP1LP55160 1127 aa8.84□□□□□ -0.99
COL11A1-208ENST00000470170 CBX2Q14781 532 aaPredicted RBP8.84□□□□□ -0.99
COL11A1-208ENST00000470170 TCERG1LQ5VWI1 586 aa8.84□□□□□ -0.99
COL11A1-208ENST00000470170 EEF1DP3Q658K8 133 aa8.84□□□□□ -0.99
COL11A1-208ENST00000470170 IGDCC3Q8IVU1 814 aa8.84□□□□□ -0.99
COL11A1-208ENST00000470170 ARHGEF39Q8N4T4 335 aa8.84□□□□□ -0.99
COL11A1-208ENST00000470170 PDLIM7Q9NR12 457 aa8.84□□□□□ -0.99
COL11A1-208ENST00000470170 APEX2Q9UBZ4 518 aa8.84□□□□□ -0.99
COL11A1-208ENST00000470170 STRIP2Q9ULQ0 834 aa8.84□□□□□ -0.99
COL11A1-208ENST00000470170 HCFC2Q9Y5Z7 792 aa8.84□□□□□ -0.99
COL11A1-208ENST00000470170 ATF4P18848 351 aaPredicted RBP8.83□□□□□ -1
COL11A1-208ENST00000470170 MAPKAPK2P49137 400 aa8.83□□□□□ -1
COL11A1-208ENST00000470170 AMPD2Q01433 879 aa8.83□□□□□ -1
COL11A1-208ENST00000470170 NR1I3Q14994 352 aa8.83□□□□□ -1
COL11A1-208ENST00000470170 TTLL10Q6ZVT0 673 aa8.83□□□□□ -1
COL11A1-208ENST00000470170 TMEFF1Q8IYR6 380 aa8.83□□□□□ -1
COL11A1-208ENST00000470170 ZNF513Q8N8E2 541 aaPredicted RBP8.83□□□□□ -1
COL11A1-208ENST00000470170 PCDHA5Q9Y5H7 936 aa8.83□□□□□ -1
COL11A1-208ENST00000470170 BACE2Q9Y5Z0 518 aa8.83□□□□□ -1
COL11A1-208ENST00000470170 ANKRD34BA5PLL1 514 aa8.82□□□□□ -1
COL11A1-208ENST00000470170 SRGAP3O43295 1099 aa8.82□□□□□ -1
COL11A1-208ENST00000470170 SEPHS1P49903 392 aa8.82□□□□□ -1
COL11A1-208ENST00000470170 CORO7P57737 925 aa8.82□□□□□ -1
COL11A1-208ENST00000470170 ZNF200P98182 395 aaPredicted RBP8.82□□□□□ -1
COL11A1-208ENST00000470170 ZC3H14Q6PJT7 736 aaKnown RBP8.82□□□□□ -1
COL11A1-208ENST00000470170 RCC1LQ96I51 464 aaKnown RBP8.82□□□□□ -1
COL11A1-208ENST00000470170 MRVI1Q9Y6F6 885 aa8.82□□□□□ -1
COL11A1-208ENST00000470170 C2orf71A6NGG8 1288 aa8.81□□□□□ -1
COL11A1-208ENST00000470170 CYBBP04839 570 aa8.81□□□□□ -1
COL11A1-208ENST00000470170 BMP7P18075 431 aa8.81□□□□□ -1
COL11A1-208ENST00000470170 ERCC5P28715 1186 aaPredicted RBP8.81□□□□□ -1
COL11A1-208ENST00000470170 GRB10Q13322 594 aa8.81□□□□□ -1
COL11A1-208ENST00000470170 PAQR3Q6TCH7 311 aa8.81□□□□□ -1
COL11A1-208ENST00000470170 DACT3Q96B18 629 aaPredicted RBP8.81□□□□□ -1
COL11A1-208ENST00000470170 PLA2G2DQ9UNK4 145 aa8.81□□□□□ -1
COL11A1-208ENST00000470170 BUB1BO60566 1050 aaPredicted RBP8.8□□□□□ -1
COL11A1-208ENST00000470170 AFF3P51826 1226 aaKnown RBP8.8□□□□□ -1
COL11A1-208ENST00000470170 CPNE8Q86YQ8 564 aa8.8□□□□□ -1
COL11A1-208ENST00000470170 TMEM151BQ8IW70 566 aa8.8□□□□□ -1
COL11A1-208ENST00000470170 NLGN2Q8NFZ4 835 aa8.8□□□□□ -1
COL11A1-208ENST00000470170 KRTAP4-7Q9BYR0 210 aa8.8□□□□□ -1
COL11A1-208ENST00000470170 CAPN10Q9HC96 672 aa8.8□□□□□ -1
COL11A1-208ENST00000470170 FBLN5Q9UBX5 448 aa8.8□□□□□ -1
COL11A1-208ENST00000470170 AKT3Q9Y243 479 aa8.8□□□□□ -1
COL11A1-208ENST00000470170 KRTAP9-7A8MTY7 169 aa8.79□□□□□ -1
COL11A1-208ENST00000470170 KCNH1O95259 989 aa8.79□□□□□ -1
COL11A1-208ENST00000470170 CNKSR3Q6P9H4 555 aa8.79□□□□□ -1
COL11A1-208ENST00000470170 FAM129CQ86XR2 697 aa8.79□□□□□ -1
COL11A1-208ENST00000470170 ZNF428Q96B54 188 aa8.79□□□□□ -1
COL11A1-208ENST00000470170 LGR4Q9BXB1 951 aa8.79□□□□□ -1
COL11A1-208ENST00000470170 RWDD3Q9Y3V2 267 aa8.79□□□□□ -1
COL11A1-208ENST00000470170 ZC3H12DA2A288 527 aaKnown RBP8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms