RNA–Protein interactions for RNA: ENST00000468963.1

SDCCAG3-209, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 2

Gene SDCCAG3, Length 686 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-209ENST00000468963 ASB14A6NK59 587 aa17.45■□□□□ 0.38
SDCCAG3-209ENST00000468963 PQBP1O60828 265 aaKnown RBP17.45■□□□□ 0.38
SDCCAG3-209ENST00000468963 ICAM1P05362 532 aa17.45■□□□□ 0.38
SDCCAG3-209ENST00000468963 SLC16A2P36021 539 aa17.45■□□□□ 0.38
SDCCAG3-209ENST00000468963 FAAP100Q0VG06 881 aa17.45■□□□□ 0.38
SDCCAG3-209ENST00000468963 MFSD6Q6ZSS7 791 aa17.45■□□□□ 0.38
SDCCAG3-209ENST00000468963 PCSK9Q8NBP7 692 aaKnown RBP17.45■□□□□ 0.38
SDCCAG3-209ENST00000468963 ELP1O95163 1332 aa17.45■□□□□ 0.38
SDCCAG3-209ENST00000468963 ASGR1P07306 291 aa17.44■□□□□ 0.38
SDCCAG3-209ENST00000468963 C6orf222P0C671 652 aaPredicted RBP17.44■□□□□ 0.38
SDCCAG3-209ENST00000468963 CCDC96Q2M329 555 aa17.44■□□□□ 0.38
SDCCAG3-209ENST00000468963 GNASQ5JWF2 1037 aa17.44■□□□□ 0.38
SDCCAG3-209ENST00000468963 SYDE2Q5VT97 1194 aa17.44■□□□□ 0.38
SDCCAG3-209ENST00000468963 TBC1D10CQ8IV04 446 aa17.44■□□□□ 0.38
SDCCAG3-209ENST00000468963 SPC25Q9HBM1 224 aa17.44■□□□□ 0.38
SDCCAG3-209ENST00000468963 GPCPD1Q9NPB8 672 aa17.44■□□□□ 0.38
SDCCAG3-209ENST00000468963 TMEM39AQ9NV64 488 aa17.44■□□□□ 0.38
SDCCAG3-209ENST00000468963 CCPG1Q9ULG6 757 aa17.44■□□□□ 0.38
SDCCAG3-209ENST00000468963 GNEQ9Y223 722 aaKnown RBP17.44■□□□□ 0.38
SDCCAG3-209ENST00000468963 STXBP5LQ9Y2K9 1186 aa17.44■□□□□ 0.38
SDCCAG3-209ENST00000468963 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.43■□□□□ 0.38
SDCCAG3-209ENST00000468963 DCDC2CA8MYV0 355 aa17.43■□□□□ 0.38
SDCCAG3-209ENST00000468963 SNHG28P0DPA3 235 aa17.43■□□□□ 0.38
SDCCAG3-209ENST00000468963 PDHBP11177 359 aa17.43■□□□□ 0.38
SDCCAG3-209ENST00000468963 EPHB4P54760 987 aa17.43■□□□□ 0.38
SDCCAG3-209ENST00000468963 MFAP1P55081 439 aaKnown RBP17.43■□□□□ 0.38
SDCCAG3-209ENST00000468963 TNFAIP2Q03169 654 aa17.43■□□□□ 0.38
SDCCAG3-209ENST00000468963 TAPT1Q6NXT6 567 aa17.43■□□□□ 0.38
SDCCAG3-209ENST00000468963 MORC4Q8TE76 937 aa17.43■□□□□ 0.38
SDCCAG3-209ENST00000468963 GLT1D1Q96MS3 346 aa17.43■□□□□ 0.38
SDCCAG3-209ENST00000468963 PURBQ96QR8 312 aaKnown RBP17.43■□□□□ 0.38
SDCCAG3-209ENST00000468963 DDX49Q9Y6V7 483 aaKnown RBP17.43■□□□□ 0.38
SDCCAG3-209ENST00000468963 ZNF213O14771 459 aa17.42■□□□□ 0.38
SDCCAG3-209ENST00000468963 RAG1P15918 1043 aa17.42■□□□□ 0.38
SDCCAG3-209ENST00000468963 BAATQ14032 418 aaPredicted RBP17.42■□□□□ 0.38
SDCCAG3-209ENST00000468963 IQSEC1Q6DN90 963 aa17.42■□□□□ 0.38
SDCCAG3-209ENST00000468963 CWC27Q6UX04 472 aaKnown RBP17.42■□□□□ 0.38
SDCCAG3-209ENST00000468963 SLC17A8Q8NDX2 589 aa17.42■□□□□ 0.38
SDCCAG3-209ENST00000468963 RNF41Q9H4P4 317 aaPredicted RBP17.42■□□□□ 0.38
SDCCAG3-209ENST00000468963 PDGFCQ9NRA1 345 aa17.42■□□□□ 0.38
SDCCAG3-209ENST00000468963 FRMPD2Q68DX3 1309 aaPredicted RBP17.42■□□□□ 0.38
SDCCAG3-209ENST00000468963 ARVCFO00192 962 aa17.41■□□□□ 0.38
SDCCAG3-209ENST00000468963 SMPD1P17405 629 aa17.41■□□□□ 0.38
SDCCAG3-209ENST00000468963 ZNF543Q08ER8 600 aa17.41■□□□□ 0.38
SDCCAG3-209ENST00000468963 NSMFQ6X4W1 530 aa17.41■□□□□ 0.38
SDCCAG3-209ENST00000468963 DGKHQ86XP1 1220 aa17.41■□□□□ 0.38
SDCCAG3-209ENST00000468963 CLEC4DQ8WXI8 215 aa17.41■□□□□ 0.38
SDCCAG3-209ENST00000468963 ANKS1AQ92625 1134 aa17.41■□□□□ 0.38
SDCCAG3-209ENST00000468963 TBX21Q9UL17 535 aa17.41■□□□□ 0.38
SDCCAG3-209ENST00000468963 TIMP1P01033 207 aa17.4■□□□□ 0.38
SDCCAG3-209ENST00000468963 NT5C2P49902 561 aa17.4■□□□□ 0.38
SDCCAG3-209ENST00000468963 BEX3Q00994 111 aa17.4■□□□□ 0.38
SDCCAG3-209ENST00000468963 TMEM63BQ5T3F8 832 aa17.4■□□□□ 0.38
SDCCAG3-209ENST00000468963 SLC43A3Q8NBI5 491 aa17.4■□□□□ 0.38
SDCCAG3-209ENST00000468963 ESR2Q92731 530 aa17.4■□□□□ 0.38
SDCCAG3-209ENST00000468963 VTI1AQ96AJ9 217 aa17.4■□□□□ 0.38
SDCCAG3-209ENST00000468963 GUCD1Q96NT3 240 aa17.4■□□□□ 0.38
SDCCAG3-209ENST00000468963 Q9Y3F1 56 aa17.4■□□□□ 0.38
SDCCAG3-209ENST00000468963 NEDD4P46934 1319 aa17.4■□□□□ 0.38
SDCCAG3-209ENST00000468963 A0A0U1RQG5 324 aaPredicted RBP17.39■□□□□ 0.37
SDCCAG3-209ENST00000468963 HIP1O00291 1037 aa17.39■□□□□ 0.37
SDCCAG3-209ENST00000468963 NFIBO00712 420 aa17.39■□□□□ 0.37
SDCCAG3-209ENST00000468963 DYNC1LI2O43237 492 aaPredicted RBP17.39■□□□□ 0.37
SDCCAG3-209ENST00000468963 PTGS1P23219 599 aa17.39■□□□□ 0.37
SDCCAG3-209ENST00000468963 NOL8Q76FK4 1167 aaKnown RBP17.39■□□□□ 0.37
SDCCAG3-209ENST00000468963 EEPD1Q7L9B9 569 aa17.39■□□□□ 0.37
SDCCAG3-209ENST00000468963 ZKSCAN3Q9BRR0 538 aa17.39■□□□□ 0.37
SDCCAG3-209ENST00000468963 DSCC1Q9BVC3 393 aa17.39■□□□□ 0.37
SDCCAG3-209ENST00000468963 VTA1Q9NP79 307 aa17.39■□□□□ 0.37
SDCCAG3-209ENST00000468963 MROH7Q68CQ1 1323 aa17.39■□□□□ 0.37
SDCCAG3-209ENST00000468963 CUL9Q8IWT3 2517 aa17.38■□□□□ 0.37
SDCCAG3-209ENST00000468963 LOC102724159A0A0B4J2E5 919 aa17.38■□□□□ 0.37
SDCCAG3-209ENST00000468963 CD4P01730 458 aa17.38■□□□□ 0.37
SDCCAG3-209ENST00000468963 SMAD3P84022 425 aaKnown RBP17.38■□□□□ 0.37
SDCCAG3-209ENST00000468963 FPGSQ05932 587 aa17.38■□□□□ 0.37
SDCCAG3-209ENST00000468963 PWP2Q15269 919 aaKnown RBP17.38■□□□□ 0.37
SDCCAG3-209ENST00000468963 FSCN1Q16658 493 aaKnown RBP17.38■□□□□ 0.37
SDCCAG3-209ENST00000468963 TLK2Q86UE8 772 aa17.38■□□□□ 0.37
SDCCAG3-209ENST00000468963 FBXO16Q8IX29 292 aaPredicted RBP17.38■□□□□ 0.37
SDCCAG3-209ENST00000468963 FAM126BQ8IXS8 530 aa17.38■□□□□ 0.37
SDCCAG3-209ENST00000468963 AP5M1Q9H0R1 490 aa17.38■□□□□ 0.37
SDCCAG3-209ENST00000468963 SEMA6BQ9H3T3 888 aa17.38■□□□□ 0.37
SDCCAG3-209ENST00000468963 DIAPH3Q9NSV4 1193 aa17.38■□□□□ 0.37
SDCCAG3-209ENST00000468963 ADD3Q9UEY8 706 aaKnown RBP17.38■□□□□ 0.37
SDCCAG3-209ENST00000468963 PNMA2Q9UL42 364 aa17.38■□□□□ 0.37
SDCCAG3-209ENST00000468963 GRIN2DO15399 1336 aa17.38■□□□□ 0.37
SDCCAG3-209ENST00000468963 LCTP09848 1927 aa17.37■□□□□ 0.37
SDCCAG3-209ENST00000468963 RBM47A0AV96 593 aaKnown RBP17.37■□□□□ 0.37
SDCCAG3-209ENST00000468963 KDM4AO75164 1064 aa17.37■□□□□ 0.37
SDCCAG3-209ENST00000468963 CABYRO75952 493 aa17.37■□□□□ 0.37
SDCCAG3-209ENST00000468963 ALDH5A1P51649 535 aaPredicted RBP17.37■□□□□ 0.37
SDCCAG3-209ENST00000468963 CCDC178Q5BJE1 867 aa17.37■□□□□ 0.37
SDCCAG3-209ENST00000468963 GPATCH4Q5T3I0 446 aaKnown RBP17.37■□□□□ 0.37
SDCCAG3-209ENST00000468963 MFSD5Q6N075 450 aa17.37■□□□□ 0.37
SDCCAG3-209ENST00000468963 CXCL17Q6UXB2 119 aa17.37■□□□□ 0.37
SDCCAG3-209ENST00000468963 KIAA1211Q6ZU35 1233 aa17.37■□□□□ 0.37
SDCCAG3-209ENST00000468963 C16orf59Q7L2K0 433 aa17.37■□□□□ 0.37
SDCCAG3-209ENST00000468963 UBA5Q9GZZ9 404 aa17.37■□□□□ 0.37
SDCCAG3-209ENST00000468963 ZSWIM5Q9P217 1185 aa17.37■□□□□ 0.37
SDCCAG3-209ENST00000468963 SUPT16HQ9Y5B9 1047 aaKnown RBP17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms