RNA–Protein interactions for RNA: ENST00000465659.5

ARHGEF3-204, Transcript of Rho guanine nucleotide exchange factor 3, humanhuman

TSL 1 (best)

Gene ARHGEF3, Length 2,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3-204ENST00000465659 USP17L1Q7RTZ2 530 aa14.3□□□□□ -0.12
ARHGEF3-204ENST00000465659 NBPF5PQ86XG9 351 aaPredicted RBP14.3□□□□□ -0.12
ARHGEF3-204ENST00000465659 FAM114A1Q8IWE2 563 aa14.3□□□□□ -0.12
ARHGEF3-204ENST00000465659 AMOTL1Q8IY63 956 aa14.3□□□□□ -0.12
ARHGEF3-204ENST00000465659 NOA1Q8NC60 698 aaKnown RBP14.3□□□□□ -0.12
ARHGEF3-204ENST00000465659 SH3RF3Q8TEJ3 882 aaPredicted RBP14.3□□□□□ -0.12
ARHGEF3-204ENST00000465659 P2RX5Q93086 422 aa14.3□□□□□ -0.12
ARHGEF3-204ENST00000465659 TMEM47Q9BQJ4 181 aa14.3□□□□□ -0.12
ARHGEF3-204ENST00000465659 TRIM9Q9C026 710 aa14.3□□□□□ -0.12
ARHGEF3-204ENST00000465659 OR52Z1P0C646 297 aa14.3□□□□□ -0.12
ARHGEF3-204ENST00000465659 RHOXF2BP0C7M4 288 aa14.3□□□□□ -0.12
ARHGEF3-204ENST00000465659 PLCG1P19174 1290 aa14.3□□□□□ -0.12
ARHGEF3-204ENST00000465659 SMARCA1P28370 1054 aa14.3□□□□□ -0.12
ARHGEF3-204ENST00000465659 CABP7Q86V35 215 aa14.3□□□□□ -0.12
ARHGEF3-204ENST00000465659 ZSCAN29Q8IWY8 852 aaPredicted RBP14.3□□□□□ -0.12
ARHGEF3-204ENST00000465659 CSGALNACT2Q8N6G5 542 aa14.3□□□□□ -0.12
ARHGEF3-204ENST00000465659 CCDC47Q96A33 483 aaKnown RBP14.3□□□□□ -0.12
ARHGEF3-204ENST00000465659 IQCDQ96DY2 449 aa14.3□□□□□ -0.12
ARHGEF3-204ENST00000465659 RPGRIP1Q96KN7 1286 aa14.3□□□□□ -0.12
ARHGEF3-204ENST00000465659 RHOXF2Q9BQY4 288 aa14.3□□□□□ -0.12
ARHGEF3-204ENST00000465659 PDE11AQ9HCR9 933 aa14.3□□□□□ -0.12
ARHGEF3-204ENST00000465659 A0A1W2PQJ5 194 aa14.29□□□□□ -0.12
ARHGEF3-204ENST00000465659 RASSF10A6NK89 507 aa14.29□□□□□ -0.12
ARHGEF3-204ENST00000465659 BAG3O95817 575 aa14.29□□□□□ -0.12
ARHGEF3-204ENST00000465659 CYLC1P35663 651 aaPredicted RBP14.29□□□□□ -0.12
ARHGEF3-204ENST00000465659 ZBED6P86452 979 aa14.29□□□□□ -0.12
ARHGEF3-204ENST00000465659 TPTE2Q6XPS3 522 aa14.29□□□□□ -0.12
ARHGEF3-204ENST00000465659 CERS3Q8IU89 383 aa14.29□□□□□ -0.12
ARHGEF3-204ENST00000465659 ZNF444Q8N0Y2 327 aaPredicted RBP14.29□□□□□ -0.12
ARHGEF3-204ENST00000465659 NEK11Q8NG66 645 aa14.29□□□□□ -0.12
ARHGEF3-204ENST00000465659 TRIM10Q9UDY6 481 aa14.29□□□□□ -0.12
ARHGEF3-204ENST00000465659 CDK5RAP2Q96SN8 1893 aa14.29□□□□□ -0.12
ARHGEF3-204ENST00000465659 B4DLN1 442 aa14.29□□□□□ -0.12
ARHGEF3-204ENST00000465659 EIF3CLB5ME19 914 aaKnown RBP14.29□□□□□ -0.12
ARHGEF3-204ENST00000465659 RPS6KA4O75676 772 aa14.29□□□□□ -0.12
ARHGEF3-204ENST00000465659 RASA1P20936 1047 aa14.29□□□□□ -0.12
ARHGEF3-204ENST00000465659 MCM6Q14566 821 aa14.29□□□□□ -0.12
ARHGEF3-204ENST00000465659 CCDC122Q5T0U0 273 aa14.29□□□□□ -0.12
ARHGEF3-204ENST00000465659 NCAPH2Q6IBW4 605 aa14.29□□□□□ -0.12
ARHGEF3-204ENST00000465659 ERGIC2Q96RQ1 377 aa14.29□□□□□ -0.12
ARHGEF3-204ENST00000465659 EIF3CQ99613 913 aaKnown RBP14.29□□□□□ -0.12
ARHGEF3-204ENST00000465659 LEMD3Q9Y2U8 911 aa14.29□□□□□ -0.12
ARHGEF3-204ENST00000465659 SAR1BQ9Y6B6 198 aa14.29□□□□□ -0.12
ARHGEF3-204ENST00000465659 DDX60LQ5H9U9 1706 aaKnown RBP14.29□□□□□ -0.12
ARHGEF3-204ENST00000465659 KRT86O43790 486 aa14.28□□□□□ -0.12
ARHGEF3-204ENST00000465659 MCM3P25205 808 aa14.28□□□□□ -0.12
ARHGEF3-204ENST00000465659 USP14P54578 494 aa14.28□□□□□ -0.12
ARHGEF3-204ENST00000465659 CASP8Q14790 479 aa14.28□□□□□ -0.12
ARHGEF3-204ENST00000465659 NONOQ15233 471 aaKnown RBP eCLIP14.28□□□□□ -0.12
ARHGEF3-204ENST00000465659 TXNRD1Q16881 649 aa14.28□□□□□ -0.12
ARHGEF3-204ENST00000465659 PURBQ96QR8 312 aaKnown RBP14.28□□□□□ -0.12
ARHGEF3-204ENST00000465659 ZNF287Q9HBT7 754 aa14.28□□□□□ -0.12
ARHGEF3-204ENST00000465659 ANO9A1A5B4 782 aa14.28□□□□□ -0.12
ARHGEF3-204ENST00000465659 KLRF2D3W0D1 207 aa14.28□□□□□ -0.12
ARHGEF3-204ENST00000465659 AMPD3Q01432 767 aa14.28□□□□□ -0.12
ARHGEF3-204ENST00000465659 MIIPQ5JXC2 388 aa14.28□□□□□ -0.12
ARHGEF3-204ENST00000465659 ANKRD40Q6AI12 368 aa14.28□□□□□ -0.12
ARHGEF3-204ENST00000465659 C15orf52Q6ZUT6 534 aaKnown RBP14.28□□□□□ -0.12
ARHGEF3-204ENST00000465659 VIPAS39Q9H9C1 493 aa14.28□□□□□ -0.12
ARHGEF3-204ENST00000465659 ZNHIT6Q9NWK9 470 aaKnown RBP14.28□□□□□ -0.12
ARHGEF3-204ENST00000465659 TARSL2A2RTX5 802 aaKnown RBP14.28□□□□□ -0.12
ARHGEF3-204ENST00000465659 TULP2O00295 520 aa14.28□□□□□ -0.12
ARHGEF3-204ENST00000465659 LDHCP07864 332 aa14.28□□□□□ -0.12
ARHGEF3-204ENST00000465659 TRIM21P19474 475 aaKnown RBP14.28□□□□□ -0.12
ARHGEF3-204ENST00000465659 GNA11P29992 359 aa14.28□□□□□ -0.12
ARHGEF3-204ENST00000465659 PDE4DQ08499 809 aa14.28□□□□□ -0.12
ARHGEF3-204ENST00000465659 TBC1D8BQ0IIM8 1120 aa14.28□□□□□ -0.12
ARHGEF3-204ENST00000465659 SLC4A8Q2Y0W8 1093 aa14.28□□□□□ -0.12
ARHGEF3-204ENST00000465659 JAKMIP2Q96AA8 810 aa14.28□□□□□ -0.12
ARHGEF3-204ENST00000465659 CNOT6LQ96LI5 555 aaKnown RBP14.28□□□□□ -0.12
ARHGEF3-204ENST00000465659 PLIN2Q99541 437 aa14.28□□□□□ -0.12
ARHGEF3-204ENST00000465659 AGPAT5Q9NUQ2 364 aa14.28□□□□□ -0.12
ARHGEF3-204ENST00000465659 JAG2Q9Y219 1238 aa14.28□□□□□ -0.12
ARHGEF3-204ENST00000465659 ATP1A1P05023 1023 aaKnown RBP14.27□□□□□ -0.12
ARHGEF3-204ENST00000465659 HNRNPH3P31942 346 aaKnown RBP14.27□□□□□ -0.12
ARHGEF3-204ENST00000465659 CKAP4Q07065 602 aaKnown RBP14.27□□□□□ -0.12
ARHGEF3-204ENST00000465659 STK4Q13043 487 aa14.27□□□□□ -0.12
ARHGEF3-204ENST00000465659 NEK8Q86SG6 692 aa14.27□□□□□ -0.12
ARHGEF3-204ENST00000465659 NHEJ1Q9H9Q4 299 aaPredicted RBP14.27□□□□□ -0.12
ARHGEF3-204ENST00000465659 C6orf50Q9HD87 102 aa14.27□□□□□ -0.12
ARHGEF3-204ENST00000465659 SRP68Q9UHB9 627 aaKnown RBP14.27□□□□□ -0.12
ARHGEF3-204ENST00000465659 SNED1Q8TER0 1413 aa14.27□□□□□ -0.13
ARHGEF3-204ENST00000465659 TNRC6CQ9HCJ0 1690 aaKnown RBP14.27□□□□□ -0.13
ARHGEF3-204ENST00000465659 ESYT2A0FGR8 921 aa14.27□□□□□ -0.13
ARHGEF3-204ENST00000465659 PES1O00541 588 aaKnown RBP14.27□□□□□ -0.13
ARHGEF3-204ENST00000465659 HOXA7P31268 230 aaPredicted RBP14.27□□□□□ -0.13
ARHGEF3-204ENST00000465659 NAPAP54920 295 aa14.27□□□□□ -0.13
ARHGEF3-204ENST00000465659 CNNM4Q6P4Q7 775 aa14.27□□□□□ -0.13
ARHGEF3-204ENST00000465659 KIAA1328Q86T90 577 aa14.27□□□□□ -0.13
ARHGEF3-204ENST00000465659 FAM71BQ8TC56 605 aa14.27□□□□□ -0.13
ARHGEF3-204ENST00000465659 TGFBRAP1Q8WUH2 860 aa14.27□□□□□ -0.13
ARHGEF3-204ENST00000465659 MMTAG2Q9BU76 263 aaKnown RBP14.27□□□□□ -0.13
ARHGEF3-204ENST00000465659 ACBD3Q9H3P7 528 aa14.27□□□□□ -0.13
ARHGEF3-204ENST00000465659 SUGCTQ9HAC7 445 aa14.27□□□□□ -0.13
ARHGEF3-204ENST00000465659 MED4Q9NPJ6 270 aa14.27□□□□□ -0.13
ARHGEF3-204ENST00000465659 STX8Q9UNK0 236 aa14.27□□□□□ -0.13
ARHGEF3-204ENST00000465659 CCNT1O60563 726 aaKnown RBP14.26□□□□□ -0.13
ARHGEF3-204ENST00000465659 NOVP48745 357 aa14.26□□□□□ -0.13
ARHGEF3-204ENST00000465659 ASIC1P78348 528 aa14.26□□□□□ -0.13
ARHGEF3-204ENST00000465659 C16orf86Q6ZW13 317 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms