RNA–Protein interactions for RNA: ENST00000460925.1

SF3A3-202, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-202ENST00000460925 PTF1AQ7RTS3 328 aa6.29□□□□□ -1.4
SF3A3-202ENST00000460925 TTC6Q86TZ1 520 aa6.29□□□□□ -1.4
SF3A3-202ENST00000460925 IL17REQ8NFR9 667 aa6.29□□□□□ -1.4
SF3A3-202ENST00000460925 ZNF669Q96BR6 464 aaPredicted RBP6.29□□□□□ -1.4
SF3A3-202ENST00000460925 WDR18Q9BV38 432 aa6.29□□□□□ -1.4
SF3A3-202ENST00000460925 ANTXR1Q9H6X2 564 aa6.29□□□□□ -1.4
SF3A3-202ENST00000460925 CNNM2Q9H8M5 875 aa6.29□□□□□ -1.4
SF3A3-202ENST00000460925 REV1Q9UBZ9 1251 aa6.29□□□□□ -1.4
SF3A3-202ENST00000460925 MAPK8IP1Q9UQF2 711 aa6.29□□□□□ -1.4
SF3A3-202ENST00000460925 THRAP3Q9Y2W1 955 aaKnown RBP6.29□□□□□ -1.4
SF3A3-202ENST00000460925 LAS1LQ9Y4W2 734 aaKnown RBP6.29□□□□□ -1.4
SF3A3-202ENST00000460925 CORINQ9Y5Q5 1042 aa6.29□□□□□ -1.4
SF3A3-202ENST00000460925 UBR2Q8IWV8 1755 aa6.29□□□□□ -1.4
SF3A3-202ENST00000460925 ZNF521Q96K83 1311 aa6.28□□□□□ -1.4
SF3A3-202ENST00000460925 MEGF11A6BM72 1044 aa6.28□□□□□ -1.4
SF3A3-202ENST00000460925 SLC22A31A6NKX4 558 aa6.28□□□□□ -1.4
SF3A3-202ENST00000460925 GNAT3A8MTJ3 354 aa6.28□□□□□ -1.4
SF3A3-202ENST00000460925 EXOC5O00471 708 aa6.28□□□□□ -1.4
SF3A3-202ENST00000460925 RNMTO43148 476 aaKnown RBP6.28□□□□□ -1.4
SF3A3-202ENST00000460925 DLGAP3O95886 979 aa6.28□□□□□ -1.4
SF3A3-202ENST00000460925 CELA2BP08218 269 aaPredicted RBP6.28□□□□□ -1.4
SF3A3-202ENST00000460925 NME1P15531 152 aaKnown RBP6.28□□□□□ -1.4
SF3A3-202ENST00000460925 PLCG1P19174 1290 aa6.28□□□□□ -1.4
SF3A3-202ENST00000460925 RXRBP28702 533 aa6.28□□□□□ -1.4
SF3A3-202ENST00000460925 NLRP12P59046 1061 aa6.28□□□□□ -1.4
SF3A3-202ENST00000460925 AKAP4Q5JQC9 854 aa6.28□□□□□ -1.4
SF3A3-202ENST00000460925 EXOSC6Q5RKV6 272 aaKnown RBP6.28□□□□□ -1.4
SF3A3-202ENST00000460925 RUFY4Q6ZNE9 571 aa6.28□□□□□ -1.4
SF3A3-202ENST00000460925 FBXO11Q86XK2 927 aa6.28□□□□□ -1.4
SF3A3-202ENST00000460925 DMRTC2Q8IXT2 367 aaPredicted RBP6.28□□□□□ -1.4
SF3A3-202ENST00000460925 JMYQ8N9B5 988 aa6.28□□□□□ -1.4
SF3A3-202ENST00000460925 ZSCAN1Q8NBB4 408 aa6.28□□□□□ -1.4
SF3A3-202ENST00000460925 MICAL1Q8TDZ2 1067 aa6.28□□□□□ -1.4
SF3A3-202ENST00000460925 TSR2Q969E8 191 aaKnown RBP6.28□□□□□ -1.4
SF3A3-202ENST00000460925 ELMO3Q96BJ8 720 aa6.28□□□□□ -1.4
SF3A3-202ENST00000460925 ATG4CQ96DT6 458 aa6.28□□□□□ -1.4
SF3A3-202ENST00000460925 PLCD4Q9BRC7 762 aa6.28□□□□□ -1.4
SF3A3-202ENST00000460925 USP26Q9BXU7 913 aa6.28□□□□□ -1.4
SF3A3-202ENST00000460925 WNT10AQ9GZT5 417 aa6.28□□□□□ -1.4
SF3A3-202ENST00000460925 MIS18AQ9NYP9 233 aa6.28□□□□□ -1.4
SF3A3-202ENST00000460925 ZBED9Q6R2W3 1325 aa6.27□□□□□ -1.41
SF3A3-202ENST00000460925 DLL1O00548 723 aa6.27□□□□□ -1.41
SF3A3-202ENST00000460925 FANCGO15287 622 aa6.27□□□□□ -1.41
SF3A3-202ENST00000460925 DDX3YO15523 660 aaKnown RBP6.27□□□□□ -1.41
SF3A3-202ENST00000460925 KCNQ3O43525 872 aa6.27□□□□□ -1.41
SF3A3-202ENST00000460925 KCNQ2O43526 872 aa6.27□□□□□ -1.41
SF3A3-202ENST00000460925 IFRD2Q12894 506 aaPredicted RBP6.27□□□□□ -1.41
SF3A3-202ENST00000460925 SLC39A6Q13433 755 aa6.27□□□□□ -1.41
SF3A3-202ENST00000460925 KRT24Q2M2I5 525 aa6.27□□□□□ -1.41
SF3A3-202ENST00000460925 AMOTQ4VCS5 1084 aa6.27□□□□□ -1.41
SF3A3-202ENST00000460925 PLEKHG4Q58EX7 1191 aa6.27□□□□□ -1.41
SF3A3-202ENST00000460925 ZNF787Q6DD87 383 aa6.27□□□□□ -1.41
SF3A3-202ENST00000460925 OVOS1Q6IE37 1185 aa6.27□□□□□ -1.41
SF3A3-202ENST00000460925 NLRC3Q7RTR2 1065 aa6.27□□□□□ -1.41
SF3A3-202ENST00000460925 IFNL2Q8IZJ0 200 aa6.27□□□□□ -1.41
SF3A3-202ENST00000460925 ST13P5Q8NFI4 369 aaPredicted RBP6.27□□□□□ -1.41
SF3A3-202ENST00000460925 RTF1Q92541 710 aaKnown RBP6.27□□□□□ -1.41
SF3A3-202ENST00000460925 SYTL4Q96C24 671 aaPredicted RBP6.27□□□□□ -1.41
SF3A3-202ENST00000460925 TMPRSS13Q9BYE2 586 aa6.27□□□□□ -1.41
SF3A3-202ENST00000460925 PNNQ9H307 717 aaKnown RBP6.27□□□□□ -1.41
SF3A3-202ENST00000460925 ST7Q9NRC1 585 aa6.27□□□□□ -1.41
SF3A3-202ENST00000460925 KCNK4Q9NYG8 393 aa6.27□□□□□ -1.41
SF3A3-202ENST00000460925 CEMIPQ8WUJ3 1361 aa6.27□□□□□ -1.41
SF3A3-202ENST00000460925 TJP1Q07157 1748 aa6.27□□□□□ -1.41
SF3A3-202ENST00000460925 LAMB4A4D0S4 1761 aa6.26□□□□□ -1.41
SF3A3-202ENST00000460925 KCPQ6ZWJ8 1503 aa6.26□□□□□ -1.41
SF3A3-202ENST00000460925 DCDC2CA8MYV0 355 aa6.26□□□□□ -1.41
SF3A3-202ENST00000460925 UPK3BL1B0FP48 263 aa6.26□□□□□ -1.41
SF3A3-202ENST00000460925 UPK3BL2E5RIL1 263 aa6.26□□□□□ -1.41
SF3A3-202ENST00000460925 TMPRSS2O15393 492 aa6.26□□□□□ -1.41
SF3A3-202ENST00000460925 DNAJA2O60884 412 aa6.26□□□□□ -1.41
SF3A3-202ENST00000460925 GJB6O95452 261 aa6.26□□□□□ -1.41
SF3A3-202ENST00000460925 ACRP10323 421 aa6.26□□□□□ -1.41
SF3A3-202ENST00000460925 ID3Q02535 119 aa6.26□□□□□ -1.41
SF3A3-202ENST00000460925 PPP2R5EQ16537 467 aa6.26□□□□□ -1.41
SF3A3-202ENST00000460925 ZBTB37Q5TC79 503 aa6.26□□□□□ -1.41
SF3A3-202ENST00000460925 LARP1BQ659C4 914 aaKnown RBP6.26□□□□□ -1.41
SF3A3-202ENST00000460925 LYPD4Q6UWN0 246 aa6.26□□□□□ -1.41
SF3A3-202ENST00000460925 FAM43BQ6ZT52 329 aaPredicted RBP6.26□□□□□ -1.41
SF3A3-202ENST00000460925 KRT27Q7Z3Y8 459 aa6.26□□□□□ -1.41
SF3A3-202ENST00000460925 FAM178BQ8IXR5 827 aa6.26□□□□□ -1.41
SF3A3-202ENST00000460925 LILRB2Q8N423 598 aa6.26□□□□□ -1.41
SF3A3-202ENST00000460925 DNAJC7Q99615 494 aa6.26□□□□□ -1.41
SF3A3-202ENST00000460925 CHMP4BQ9H444 224 aaKnown RBP6.26□□□□□ -1.41
SF3A3-202ENST00000460925 SUGCTQ9HAC7 445 aa6.26□□□□□ -1.41
SF3A3-202ENST00000460925 CRIM1Q9NZV1 1036 aa6.26□□□□□ -1.41
SF3A3-202ENST00000460925 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.26□□□□□ -1.41
SF3A3-202ENST00000460925 HIF3AQ9Y2N7 669 aa6.26□□□□□ -1.41
SF3A3-202ENST00000460925 LY75O60449 1722 aa6.25□□□□□ -1.41
SF3A3-202ENST00000460925 TAF1LQ8IZX4 1826 aa6.25□□□□□ -1.41
SF3A3-202ENST00000460925 TUBGCP6Q96RT7 1819 aa6.25□□□□□ -1.41
SF3A3-202ENST00000460925 PGRP06401 933 aa6.25□□□□□ -1.41
SF3A3-202ENST00000460925 AMPD1P23109 780 aa6.25□□□□□ -1.41
SF3A3-202ENST00000460925 GRK4P32298 578 aa6.25□□□□□ -1.41
SF3A3-202ENST00000460925 NTF4P34130 210 aa6.25□□□□□ -1.41
SF3A3-202ENST00000460925 CCNFP41002 786 aa6.25□□□□□ -1.41
SF3A3-202ENST00000460925 TEFQ10587 303 aa6.25□□□□□ -1.41
SF3A3-202ENST00000460925 NCAPHQ15003 741 aa6.25□□□□□ -1.41
SF3A3-202ENST00000460925 UNC5AQ6ZN44 842 aa6.25□□□□□ -1.41
SF3A3-202ENST00000460925 C12orf40Q86WS4 652 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms