RNA–Protein interactions for RNA: ENST00000460509.1

VBP1-202, Transcript of VHL binding protein 1, humanhuman

TSL 2

Gene VBP1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-202ENST00000460509 SLC23A3Q6PIS1 610 aa6.97□□□□□ -1.29
VBP1-202ENST00000460509 NFXL1Q6ZNB6 911 aa6.97□□□□□ -1.29
VBP1-202ENST00000460509 SCUBE1Q8IWY4 988 aa6.97□□□□□ -1.29
VBP1-202ENST00000460509 TMEM145Q8NBT3 493 aa6.97□□□□□ -1.29
VBP1-202ENST00000460509 SLC26A8Q96RN1 970 aa6.97□□□□□ -1.29
VBP1-202ENST00000460509 TMEM59LQ9UK28 342 aa6.97□□□□□ -1.29
VBP1-202ENST00000460509 TBX22Q9Y458 520 aa6.97□□□□□ -1.29
VBP1-202ENST00000460509 KRTAP4-8A0A0G2JLE6 195 aa6.96□□□□□ -1.3
VBP1-202ENST00000460509 NPHP3-ACAD11A0A0J9YXS1 232 aa6.96□□□□□ -1.3
VBP1-202ENST00000460509 BLACEA4D250 179 aa6.96□□□□□ -1.3
VBP1-202ENST00000460509 BTBD11A6QL63 1104 aa6.96□□□□□ -1.3
VBP1-202ENST00000460509 DLX3O60479 287 aa6.96□□□□□ -1.3
VBP1-202ENST00000460509 TBC1D8O95759 1140 aa6.96□□□□□ -1.3
VBP1-202ENST00000460509 PLS3P13797 630 aa6.96□□□□□ -1.3
VBP1-202ENST00000460509 PAMP19021 973 aa6.96□□□□□ -1.3
VBP1-202ENST00000460509 DUSP4Q13115 394 aa6.96□□□□□ -1.3
VBP1-202ENST00000460509 SQSTM1Q13501 440 aa6.96□□□□□ -1.3
VBP1-202ENST00000460509 SDE2Q6IQ49 451 aa6.96□□□□□ -1.3
VBP1-202ENST00000460509 RCSD1Q6JBY9 416 aa6.96□□□□□ -1.3
VBP1-202ENST00000460509 USP53Q70EK8 1073 aa6.96□□□□□ -1.3
VBP1-202ENST00000460509 HOMER1Q86YM7 354 aa6.96□□□□□ -1.3
VBP1-202ENST00000460509 CPNE8Q86YQ8 564 aa6.96□□□□□ -1.3
VBP1-202ENST00000460509 JAMLQ86YT9 394 aa6.96□□□□□ -1.3
VBP1-202ENST00000460509 APPBP2Q92624 585 aa6.96□□□□□ -1.3
VBP1-202ENST00000460509 OSBP2Q969R2 916 aa6.96□□□□□ -1.3
VBP1-202ENST00000460509 EXOC2Q96KP1 924 aa6.96□□□□□ -1.3
VBP1-202ENST00000460509 PTCHD1Q96NR3 888 aa6.96□□□□□ -1.3
VBP1-202ENST00000460509 DHRS4Q9BTZ2 278 aa6.96□□□□□ -1.3
VBP1-202ENST00000460509 SHROOM4Q9ULL8 1493 aa6.96□□□□□ -1.3
VBP1-202ENST00000460509 FGF10O15520 208 aaPredicted RBP6.95□□□□□ -1.3
VBP1-202ENST00000460509 SLC14A2Q15849 920 aa6.95□□□□□ -1.3
VBP1-202ENST00000460509 LONRF2Q1L5Z9 754 aa6.95□□□□□ -1.3
VBP1-202ENST00000460509 TMEM67Q5HYA8 995 aa6.95□□□□□ -1.3
VBP1-202ENST00000460509 PPIL6Q8IXY8 311 aa6.95□□□□□ -1.3
VBP1-202ENST00000460509 FRS2Q8WU20 508 aa6.95□□□□□ -1.3
VBP1-202ENST00000460509 COPS5Q92905 334 aa6.95□□□□□ -1.3
VBP1-202ENST00000460509 MAP6Q96JE9 813 aa6.95□□□□□ -1.3
VBP1-202ENST00000460509 FCRL2Q96LA5 508 aaPredicted RBP6.95□□□□□ -1.3
VBP1-202ENST00000460509 ERVK13-1Q9NX77 482 aa6.95□□□□□ -1.3
VBP1-202ENST00000460509 ADAMTS6Q9UKP5 1117 aa6.95□□□□□ -1.3
VBP1-202ENST00000460509 MEFVO15553 781 aaPredicted RBP6.94□□□□□ -1.3
VBP1-202ENST00000460509 CDC45O75419 566 aa6.94□□□□□ -1.3
VBP1-202ENST00000460509 USP2O75604 605 aaPredicted RBP6.94□□□□□ -1.3
VBP1-202ENST00000460509 ASMTLO95671 621 aa6.94□□□□□ -1.3
VBP1-202ENST00000460509 RNASE1P07998 156 aaKnown RBP6.94□□□□□ -1.3
VBP1-202ENST00000460509 ZGLP1P0C6A0 271 aa6.94□□□□□ -1.3
VBP1-202ENST00000460509 GP2P55259 537 aaKnown RBP6.94□□□□□ -1.3
VBP1-202ENST00000460509 SUMO1P63165 101 aaKnown RBP6.94□□□□□ -1.3
VBP1-202ENST00000460509 MAP4K2Q12851 820 aa6.94□□□□□ -1.3
VBP1-202ENST00000460509 ZNF792Q3KQV3 632 aa6.94□□□□□ -1.3
VBP1-202ENST00000460509 ZC3H12BQ5HYM0 836 aaKnown RBP6.94□□□□□ -1.3
VBP1-202ENST00000460509 HLA-DQA1Q5Y7H0 255 aa6.94□□□□□ -1.3
VBP1-202ENST00000460509 CEP128Q6ZU80 1094 aa6.94□□□□□ -1.3
VBP1-202ENST00000460509 NLGN1Q8N2Q7 840 aa6.94□□□□□ -1.3
VBP1-202ENST00000460509 JMYQ8N9B5 988 aa6.94□□□□□ -1.3
VBP1-202ENST00000460509 CCDC120Q96HB5 630 aa6.94□□□□□ -1.3
VBP1-202ENST00000460509 RC3H2Q9HBD1 1191 aaKnown RBP6.94□□□□□ -1.3
VBP1-202ENST00000460509 MBNL3Q9NUK0 354 aaKnown RBP6.94□□□□□ -1.3
VBP1-202ENST00000460509 EBF1Q9UH73 591 aa6.94□□□□□ -1.3
VBP1-202ENST00000460509 MRPS23Q9Y3D9 190 aaKnown RBP6.94□□□□□ -1.3
VBP1-202ENST00000460509 A0A1W2PQ27 194 aa6.93□□□□□ -1.3
VBP1-202ENST00000460509 A0A1W2PQ64 194 aa6.93□□□□□ -1.3
VBP1-202ENST00000460509 A0A1W2PQC6 194 aa6.93□□□□□ -1.3
VBP1-202ENST00000460509 A0A1W2PQD8 194 aa6.93□□□□□ -1.3
VBP1-202ENST00000460509 CAPNS1P04632 268 aa6.93□□□□□ -1.3
VBP1-202ENST00000460509 SCG5P05408 212 aa6.93□□□□□ -1.3
VBP1-202ENST00000460509 CYP4F3Q08477 520 aa6.93□□□□□ -1.3
VBP1-202ENST00000460509 CYP2R1Q6VVX0 501 aa6.93□□□□□ -1.3
VBP1-202ENST00000460509 ABI1Q8IZP0 508 aa6.93□□□□□ -1.3
VBP1-202ENST00000460509 OXR1Q8N573 874 aa6.93□□□□□ -1.3
VBP1-202ENST00000460509 DIO2Q92813 273 aa6.93□□□□□ -1.3
VBP1-202ENST00000460509 HHIPL1Q96JK4 782 aa6.93□□□□□ -1.3
VBP1-202ENST00000460509 TMEM260Q9NX78 707 aa6.93□□□□□ -1.3
VBP1-202ENST00000460509 TMEFF2Q9UIK5 374 aaPredicted RBP6.93□□□□□ -1.3
VBP1-202ENST00000460509 PPP1R12AO14974 1030 aaPredicted RBP6.92□□□□□ -1.3
VBP1-202ENST00000460509 CLSTN1O94985 981 aa6.92□□□□□ -1.3
VBP1-202ENST00000460509 RTP1P59025 263 aa6.92□□□□□ -1.3
VBP1-202ENST00000460509 ERVFC1P60507 584 aa6.92□□□□□ -1.3
VBP1-202ENST00000460509 C21orf62-AS1Q17RA5 79 aa6.92□□□□□ -1.3
VBP1-202ENST00000460509 DENND5AQ6IQ26 1287 aa6.92□□□□□ -1.3
VBP1-202ENST00000460509 SPPL2CQ8IUH8 684 aa6.92□□□□□ -1.3
VBP1-202ENST00000460509 ANKS4BQ8N8V4 417 aa6.92□□□□□ -1.3
VBP1-202ENST00000460509 KREMEN2Q8NCW0 462 aa6.92□□□□□ -1.3
VBP1-202ENST00000460509 TMEM52Q8NDY8 209 aa6.92□□□□□ -1.3
VBP1-202ENST00000460509 NPLOC4Q8TAT6 608 aa6.92□□□□□ -1.3
VBP1-202ENST00000460509 LINC01599Q8WXQ3 324 aa6.92□□□□□ -1.3
VBP1-202ENST00000460509 CHAMP1Q96JM3 812 aa6.92□□□□□ -1.3
VBP1-202ENST00000460509 G6PC3Q9BUM1 346 aa6.92□□□□□ -1.3
VBP1-202ENST00000460509 C19orf44Q9H6X5 657 aa6.92□□□□□ -1.3
VBP1-202ENST00000460509 BTG4Q9NY30 223 aa6.92□□□□□ -1.3
VBP1-202ENST00000460509 TNFRSF10DQ9UBN6 386 aa6.92□□□□□ -1.3
VBP1-202ENST00000460509 ZNF281Q9Y2X9 895 aa6.92□□□□□ -1.3
VBP1-202ENST00000460509 TRBV23OR9-2A0A075B6M9 112 aa6.91□□□□□ -1.3
VBP1-202ENST00000460509 CCDC163A0A0D9SF12 145 aa6.91□□□□□ -1.3
VBP1-202ENST00000460509 FADS2P1A8MWK0 482 aa6.91□□□□□ -1.3
VBP1-202ENST00000460509 RAC2P15153 192 aa6.91□□□□□ -1.3
VBP1-202ENST00000460509 TRHRP34981 398 aaPredicted RBP6.91□□□□□ -1.3
VBP1-202ENST00000460509 SLC35F1Q5T1Q4 408 aa6.91□□□□□ -1.3
VBP1-202ENST00000460509 KCNT2Q6UVM3 1135 aa6.91□□□□□ -1.3
VBP1-202ENST00000460509 PDZD8Q8NEN9 1154 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms