RNA–Protein interactions for RNA: ENST00000454952.1

NIF3L1-209, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-209ENST00000454952 SLFN13Q68D06 897 aa9.53□□□□□ -0.88
NIF3L1-209ENST00000454952 ARMCX2Q7L311 632 aa9.53□□□□□ -0.88
NIF3L1-209ENST00000454952 NEDD1Q8NHV4 660 aa9.53□□□□□ -0.88
NIF3L1-209ENST00000454952 OSBP2Q969R2 916 aa9.53□□□□□ -0.88
NIF3L1-209ENST00000454952 LENG1Q96BZ8 264 aaPredicted RBP9.53□□□□□ -0.88
NIF3L1-209ENST00000454952 TIFAQ96CG3 184 aa9.53□□□□□ -0.88
NIF3L1-209ENST00000454952 GMCL1Q96IK5 515 aa9.53□□□□□ -0.88
NIF3L1-209ENST00000454952 DCTPP1Q9H773 170 aa9.53□□□□□ -0.88
NIF3L1-209ENST00000454952 RAVER2Q9HCJ3 691 aaKnown RBP9.53□□□□□ -0.88
NIF3L1-209ENST00000454952 ISY1Q9ULR0 285 aaKnown RBP9.53□□□□□ -0.88
NIF3L1-209ENST00000454952 TTC41PQ6P2S7 1318 aa9.53□□□□□ -0.88
NIF3L1-209ENST00000454952 SMARCA5O60264 1052 aaPredicted RBP9.52□□□□□ -0.89
NIF3L1-209ENST00000454952 PLA2G6O60733 806 aa9.52□□□□□ -0.89
NIF3L1-209ENST00000454952 CHGBP05060 677 aa9.52□□□□□ -0.89
NIF3L1-209ENST00000454952 SLC1A4P43007 532 aa9.52□□□□□ -0.89
NIF3L1-209ENST00000454952 TNFAIP2Q03169 654 aa9.52□□□□□ -0.89
NIF3L1-209ENST00000454952 IKQ13123 557 aaPredicted RBP9.52□□□□□ -0.89
NIF3L1-209ENST00000454952 RAB30Q15771 203 aa9.52□□□□□ -0.89
NIF3L1-209ENST00000454952 NOL8Q76FK4 1167 aaKnown RBP9.52□□□□□ -0.89
NIF3L1-209ENST00000454952 CCDC144CPQ8IYA2 1237 aa9.52□□□□□ -0.89
NIF3L1-209ENST00000454952 IFNL3Q8IZI9 196 aa9.52□□□□□ -0.89
NIF3L1-209ENST00000454952 STK11IPQ8N1F8 1099 aa9.52□□□□□ -0.89
NIF3L1-209ENST00000454952 LRRC47Q8N1G4 583 aaKnown RBP9.52□□□□□ -0.89
NIF3L1-209ENST00000454952 STAG1Q8WVM7 1258 aa9.52□□□□□ -0.89
NIF3L1-209ENST00000454952 GAS2L1Q99501 681 aaPredicted RBP9.52□□□□□ -0.89
NIF3L1-209ENST00000454952 AP5M1Q9H0R1 490 aa9.52□□□□□ -0.89
NIF3L1-209ENST00000454952 NAPBQ9H115 298 aa9.52□□□□□ -0.89
NIF3L1-209ENST00000454952 ZNF576Q9H609 170 aa9.52□□□□□ -0.89
NIF3L1-209ENST00000454952 PNMA2Q9UL42 364 aa9.52□□□□□ -0.89
NIF3L1-209ENST00000454952 Q9Y3F1 56 aa9.52□□□□□ -0.89
NIF3L1-209ENST00000454952 LOC102724159A0A0B4J2E5 919 aa9.51□□□□□ -0.89
NIF3L1-209ENST00000454952 TMEM232C9JQI7 657 aa9.51□□□□□ -0.89
NIF3L1-209ENST00000454952 PRDM1O75626 825 aa9.51□□□□□ -0.89
NIF3L1-209ENST00000454952 TFAP4Q01664 338 aa9.51□□□□□ -0.89
NIF3L1-209ENST00000454952 PWP2Q15269 919 aaKnown RBP9.51□□□□□ -0.89
NIF3L1-209ENST00000454952 TJAP1Q5JTD0 557 aa9.51□□□□□ -0.89
NIF3L1-209ENST00000454952 TMEM240Q5SV17 173 aa9.51□□□□□ -0.89
NIF3L1-209ENST00000454952 FAM126BQ8IXS8 530 aa9.51□□□□□ -0.89
NIF3L1-209ENST00000454952 FAM133AQ8N9E0 248 aa9.51□□□□□ -0.89
NIF3L1-209ENST00000454952 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.51□□□□□ -0.89
NIF3L1-209ENST00000454952 EPB41L4AQ9HCS5 686 aaPredicted RBP9.51□□□□□ -0.89
NIF3L1-209ENST00000454952 HOMER2Q9NSB8 354 aa9.51□□□□□ -0.89
NIF3L1-209ENST00000454952 RNF146Q9NTX7 359 aa9.51□□□□□ -0.89
NIF3L1-209ENST00000454952 MSRAQ9UJ68 235 aa9.51□□□□□ -0.89
NIF3L1-209ENST00000454952 MYADML2A6NDP7 307 aa9.5□□□□□ -0.89
NIF3L1-209ENST00000454952 M0R2C6 588 aa9.5□□□□□ -0.89
NIF3L1-209ENST00000454952 PPP1R37O75864 691 aa9.5□□□□□ -0.89
NIF3L1-209ENST00000454952 CSF2RAP15509 400 aa9.5□□□□□ -0.89
NIF3L1-209ENST00000454952 PPARAQ07869 468 aa9.5□□□□□ -0.89
NIF3L1-209ENST00000454952 GRIN2CQ14957 1233 aa9.5□□□□□ -0.89
NIF3L1-209ENST00000454952 FSCN1Q16658 493 aaKnown RBP9.5□□□□□ -0.89
NIF3L1-209ENST00000454952 AKNAD1Q5T1N1 836 aa9.5□□□□□ -0.89
NIF3L1-209ENST00000454952 RASIP1Q5U651 963 aa9.5□□□□□ -0.89
NIF3L1-209ENST00000454952 IQSEC1Q6DN90 963 aa9.5□□□□□ -0.89
NIF3L1-209ENST00000454952 RCSD1Q6JBY9 416 aa9.5□□□□□ -0.89
NIF3L1-209ENST00000454952 TLK2Q86UE8 772 aa9.5□□□□□ -0.89
NIF3L1-209ENST00000454952 RPUSD2Q8IZ73 545 aaKnown RBP9.5□□□□□ -0.89
NIF3L1-209ENST00000454952 HERVK_113Q902F9 699 aa9.5□□□□□ -0.89
NIF3L1-209ENST00000454952 FGD4Q96M96 766 aa9.5□□□□□ -0.89
NIF3L1-209ENST00000454952 TRERF1Q96PN7 1200 aa9.5□□□□□ -0.89
NIF3L1-209ENST00000454952 MPHOSPH6Q99547 160 aaKnown RBP9.5□□□□□ -0.89
NIF3L1-209ENST00000454952 FSD1Q9BTV5 496 aa9.5□□□□□ -0.89
NIF3L1-209ENST00000454952 KATNBL1Q9H079 304 aa9.5□□□□□ -0.89
NIF3L1-209ENST00000454952 IL23AQ9NPF7 189 aa9.5□□□□□ -0.89
NIF3L1-209ENST00000454952 A1CFQ9NQ94 594 aaKnown RBP9.5□□□□□ -0.89
NIF3L1-209ENST00000454952 ADD3Q9UEY8 706 aaKnown RBP9.5□□□□□ -0.89
NIF3L1-209ENST00000454952 UNC80Q8N2C7 3258 aa9.5□□□□□ -0.89
NIF3L1-209ENST00000454952 TTC28Q96AY4 2481 aa9.49□□□□□ -0.89
NIF3L1-209ENST00000454952 LAMA2P24043 3122 aaKnown RBP9.49□□□□□ -0.89
NIF3L1-209ENST00000454952 TSPY2A6NKD2 308 aa9.49□□□□□ -0.89
NIF3L1-209ENST00000454952 CD4P01730 458 aa9.49□□□□□ -0.89
NIF3L1-209ENST00000454952 FGBP02675 491 aa9.49□□□□□ -0.89
NIF3L1-209ENST00000454952 PFKMP08237 780 aa9.49□□□□□ -0.89
NIF3L1-209ENST00000454952 SUPT20HL2P0C7V6 817 aa9.49□□□□□ -0.89
NIF3L1-209ENST00000454952 ALAS1P13196 640 aa9.49□□□□□ -0.89
NIF3L1-209ENST00000454952 PRKCSHP14314 528 aaPredicted RBP9.49□□□□□ -0.89
NIF3L1-209ENST00000454952 CNTN2Q02246 1040 aa9.49□□□□□ -0.89
NIF3L1-209ENST00000454952 ITGA7Q13683 1181 aa9.49□□□□□ -0.89
NIF3L1-209ENST00000454952 BRDTQ58F21 947 aaPredicted RBP9.49□□□□□ -0.89
NIF3L1-209ENST00000454952 ZNF365Q70YC5 407 aa9.49□□□□□ -0.89
NIF3L1-209ENST00000454952 SLC43A3Q8NBI5 491 aa9.49□□□□□ -0.89
NIF3L1-209ENST00000454952 ATXN2LQ8WWM7 1075 aaKnown RBP9.49□□□□□ -0.89
NIF3L1-209ENST00000454952 MS4A3Q96HJ5 214 aa9.49□□□□□ -0.89
NIF3L1-209ENST00000454952 PBX4Q9BYU1 374 aa9.49□□□□□ -0.89
NIF3L1-209ENST00000454952 PPP1R12CQ9BZL4 782 aa9.49□□□□□ -0.89
NIF3L1-209ENST00000454952 HIPK3Q9H422 1215 aa9.49□□□□□ -0.89
NIF3L1-209ENST00000454952 VTA1Q9NP79 307 aa9.49□□□□□ -0.89
NIF3L1-209ENST00000454952 PRDM6Q9NQX0 595 aa9.49□□□□□ -0.89
NIF3L1-209ENST00000454952 STX8Q9UNK0 236 aa9.49□□□□□ -0.89
NIF3L1-209ENST00000454952 TRPC6Q9Y210 931 aa9.49□□□□□ -0.89
NIF3L1-209ENST00000454952 GNEQ9Y223 722 aaKnown RBP9.49□□□□□ -0.89
NIF3L1-209ENST00000454952 LRRC37A2A6NM11 1700 aa9.48□□□□□ -0.89
NIF3L1-209ENST00000454952 CTAGE5O15320 804 aa9.48□□□□□ -0.89
NIF3L1-209ENST00000454952 ADCY6O43306 1168 aa9.48□□□□□ -0.89
NIF3L1-209ENST00000454952 MCCP23508 829 aa9.48□□□□□ -0.89
NIF3L1-209ENST00000454952 ZMYM1Q5SVZ6 1142 aa9.48□□□□□ -0.89
NIF3L1-209ENST00000454952 CXCL17Q6UXB2 119 aa9.48□□□□□ -0.89
NIF3L1-209ENST00000454952 C16orf59Q7L2K0 433 aa9.48□□□□□ -0.89
NIF3L1-209ENST00000454952 TICAM2Q86XR7 235 aa9.48□□□□□ -0.89
NIF3L1-209ENST00000454952 IL27Q8NEV9 243 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms