RNA–Protein interactions for RNA: ENST00000454591.6

ECHDC1-209, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-209ENST00000454591 IGKV6D-41A0A0C4DH26 115 aa14.06□□□□□ -0.16
ECHDC1-209ENST00000454591 BICDL2A1A5D9 508 aa14.06□□□□□ -0.16
ECHDC1-209ENST00000454591 ONECUT3O60422 494 aaPredicted RBP14.06□□□□□ -0.16
ECHDC1-209ENST00000454591 TUBBP07437 444 aa14.06□□□□□ -0.16
ECHDC1-209ENST00000454591 SNHG28P0DPA3 235 aa14.06□□□□□ -0.16
ECHDC1-209ENST00000454591 SRGNP10124 158 aa14.06□□□□□ -0.16
ECHDC1-209ENST00000454591 ARHGAP25P42331 645 aa14.06□□□□□ -0.16
ECHDC1-209ENST00000454591 BRD3Q15059 726 aa14.06□□□□□ -0.16
ECHDC1-209ENST00000454591 PPP1R18Q6NYC8 613 aa14.06□□□□□ -0.16
ECHDC1-209ENST00000454591 CC2D1AQ6P1N0 951 aaPredicted RBP14.06□□□□□ -0.16
ECHDC1-209ENST00000454591 NEK8Q86SG6 692 aa14.06□□□□□ -0.16
ECHDC1-209ENST00000454591 CABP7Q86V35 215 aa14.06□□□□□ -0.16
ECHDC1-209ENST00000454591 FAM114A1Q8IWE2 563 aa14.06□□□□□ -0.16
ECHDC1-209ENST00000454591 TEX11Q8IYF3 940 aa14.06□□□□□ -0.16
ECHDC1-209ENST00000454591 MSANTD4Q8NCY6 345 aa14.06□□□□□ -0.16
ECHDC1-209ENST00000454591 OR8K1Q8NGG5 319 aa14.06□□□□□ -0.16
ECHDC1-209ENST00000454591 RASGRP4Q8TDF6 673 aa14.06□□□□□ -0.16
ECHDC1-209ENST00000454591 RBM17Q96I25 401 aaKnown RBP14.06□□□□□ -0.16
ECHDC1-209ENST00000454591 DUSP9Q99956 384 aaKnown RBP14.06□□□□□ -0.16
ECHDC1-209ENST00000454591 NUP58Q9BVL2 599 aa14.06□□□□□ -0.16
ECHDC1-209ENST00000454591 TAB2Q9NYJ8 693 aa14.06□□□□□ -0.16
ECHDC1-209ENST00000454591 STK17AQ9UEE5 414 aa14.06□□□□□ -0.16
ECHDC1-209ENST00000454591 GGA1Q9UJY5 639 aa14.06□□□□□ -0.16
ECHDC1-209ENST00000454591 RAB21Q9UL25 225 aa14.06□□□□□ -0.16
ECHDC1-209ENST00000454591 CCDC151A5D8V7 595 aa14.05□□□□□ -0.16
ECHDC1-209ENST00000454591 KRT9P35527 623 aa14.05□□□□□ -0.16
ECHDC1-209ENST00000454591 CCT6AP40227 531 aaKnown RBP14.05□□□□□ -0.16
ECHDC1-209ENST00000454591 FXR2P51116 673 aaKnown RBP eCLIP14.05□□□□□ -0.16
ECHDC1-209ENST00000454591 NAPAP54920 295 aa14.05□□□□□ -0.16
ECHDC1-209ENST00000454591 CDK17Q00537 523 aa14.05□□□□□ -0.16
ECHDC1-209ENST00000454591 AMPD3Q01432 767 aa14.05□□□□□ -0.16
ECHDC1-209ENST00000454591 GABPAQ06546 454 aa14.05□□□□□ -0.16
ECHDC1-209ENST00000454591 WHAMMP3Q1A5X7 153 aa14.05□□□□□ -0.16
ECHDC1-209ENST00000454591 ASPRV1Q53RT3 343 aa14.05□□□□□ -0.16
ECHDC1-209ENST00000454591 MAPKAPK5Q8IW41 473 aa14.05□□□□□ -0.16
ECHDC1-209ENST00000454591 SLC44A5Q8NCS7 719 aa14.05□□□□□ -0.16
ECHDC1-209ENST00000454591 LRRC15Q8TF66 581 aa14.05□□□□□ -0.16
ECHDC1-209ENST00000454591 RPGRQ92834 1020 aaKnown RBP14.05□□□□□ -0.16
ECHDC1-209ENST00000454591 MTMR9Q96QG7 549 aa14.05□□□□□ -0.16
ECHDC1-209ENST00000454591 TRIM9Q9C026 710 aa14.05□□□□□ -0.16
ECHDC1-209ENST00000454591 TTYH3Q9C0H2 523 aa14.05□□□□□ -0.16
ECHDC1-209ENST00000454591 VPS16Q9H269 839 aa14.05□□□□□ -0.16
ECHDC1-209ENST00000454591 NRXN2Q9P2S2 1712 aa14.05□□□□□ -0.16
ECHDC1-209ENST00000454591 PVALEFA0A1B0GWK0 134 aa14.05□□□□□ -0.16
ECHDC1-209ENST00000454591 A0A1W2PQJ5 194 aa14.05□□□□□ -0.16
ECHDC1-209ENST00000454591 CTAGE9A4FU28 777 aa14.05□□□□□ -0.16
ECHDC1-209ENST00000454591 SMCO2A6NFE2 343 aa14.05□□□□□ -0.16
ECHDC1-209ENST00000454591 RNF225M0QZC1 329 aaPredicted RBP14.05□□□□□ -0.16
ECHDC1-209ENST00000454591 SLC26A4O43511 780 aa14.05□□□□□ -0.16
ECHDC1-209ENST00000454591 PLA2G4AP47712 749 aa14.05□□□□□ -0.16
ECHDC1-209ENST00000454591 UBXN1Q04323 297 aa14.05□□□□□ -0.16
ECHDC1-209ENST00000454591 ZSCAN29Q8IWY8 852 aaPredicted RBP14.05□□□□□ -0.16
ECHDC1-209ENST00000454591 FBXO41Q8TF61 875 aa14.05□□□□□ -0.16
ECHDC1-209ENST00000454591 CPLX3Q8WVH0 158 aa14.05□□□□□ -0.16
ECHDC1-209ENST00000454591 P2RX5Q93086 422 aa14.05□□□□□ -0.16
ECHDC1-209ENST00000454591 C8orf37Q96NL8 207 aa14.05□□□□□ -0.16
ECHDC1-209ENST00000454591 ERGIC2Q96RQ1 377 aa14.05□□□□□ -0.16
ECHDC1-209ENST00000454591 HAUS4Q9H6D7 363 aa14.05□□□□□ -0.16
ECHDC1-209ENST00000454591 UFL1O94874 794 aa14.04□□□□□ -0.16
ECHDC1-209ENST00000454591 TBC1D8O95759 1140 aa14.04□□□□□ -0.16
ECHDC1-209ENST00000454591 PLCG1P19174 1290 aa14.04□□□□□ -0.16
ECHDC1-209ENST00000454591 ST5P78524 1137 aa14.04□□□□□ -0.16
ECHDC1-209ENST00000454591 AMPD2Q01433 879 aa14.04□□□□□ -0.16
ECHDC1-209ENST00000454591 PDIA5Q14554 519 aa14.04□□□□□ -0.16
ECHDC1-209ENST00000454591 FAM196AQ6ZSG2 479 aa14.04□□□□□ -0.16
ECHDC1-209ENST00000454591 CCDC24Q8N4L8 307 aa14.04□□□□□ -0.16
ECHDC1-209ENST00000454591 NUP88Q99567 741 aaPredicted RBP14.04□□□□□ -0.16
ECHDC1-209ENST00000454591 NAPGQ99747 312 aaPredicted RBP14.04□□□□□ -0.16
ECHDC1-209ENST00000454591 MMTAG2Q9BU76 263 aaKnown RBP14.04□□□□□ -0.16
ECHDC1-209ENST00000454591 SEC63Q9UGP8 760 aaKnown RBP14.04□□□□□ -0.16
ECHDC1-209ENST00000454591 STX8Q9UNK0 236 aa14.04□□□□□ -0.16
ECHDC1-209ENST00000454591 JAG2Q9Y219 1238 aa14.04□□□□□ -0.16
ECHDC1-209ENST00000454591 LUC7L2Q9Y383 392 aaKnown RBP14.04□□□□□ -0.16
ECHDC1-209ENST00000454591 EPN1Q9Y6I3 576 aaPredicted RBP14.04□□□□□ -0.16
ECHDC1-209ENST00000454591 TTC26A0AVF1 554 aa14.03□□□□□ -0.16
ECHDC1-209ENST00000454591 PP2D1A8MPX8 630 aa14.03□□□□□ -0.16
ECHDC1-209ENST00000454591 PSMD14O00487 310 aa14.03□□□□□ -0.16
ECHDC1-209ENST00000454591 NDUFA10O95299 355 aa14.03□□□□□ -0.16
ECHDC1-209ENST00000454591 GYS1P13807 737 aa14.03□□□□□ -0.16
ECHDC1-209ENST00000454591 HMGB2P26583 209 aaKnown RBP14.03□□□□□ -0.16
ECHDC1-209ENST00000454591 CDC25AP30304 524 aa14.03□□□□□ -0.16
ECHDC1-209ENST00000454591 PMS1P54277 932 aaKnown RBP14.03□□□□□ -0.16
ECHDC1-209ENST00000454591 CHMP4BP1P59074 171 aa14.03□□□□□ -0.16
ECHDC1-209ENST00000454591 TXNRD1Q16881 649 aa14.03□□□□□ -0.16
ECHDC1-209ENST00000454591 ZNF569Q5MCW4 686 aa14.03□□□□□ -0.16
ECHDC1-209ENST00000454591 SOGA3Q5TF21 947 aa14.03□□□□□ -0.16
ECHDC1-209ENST00000454591 CENPPQ6IPU0 288 aa14.03□□□□□ -0.16
ECHDC1-209ENST00000454591 CCDC170Q8IYT3 715 aa14.03□□□□□ -0.16
ECHDC1-209ENST00000454591 CEP95Q96GE4 821 aa14.03□□□□□ -0.16
ECHDC1-209ENST00000454591 TRIM47Q96LD4 638 aa14.03□□□□□ -0.16
ECHDC1-209ENST00000454591 PARD6BQ9BYG5 372 aa14.03□□□□□ -0.16
ECHDC1-209ENST00000454591 LZTFL1Q9NQ48 299 aa14.03□□□□□ -0.16
ECHDC1-209ENST00000454591 MAGEC2Q9UBF1 373 aaPredicted RBP14.03□□□□□ -0.16
ECHDC1-209ENST00000454591 TRIM49BA6NDI0 452 aa14.02□□□□□ -0.16
ECHDC1-209ENST00000454591 MAP2K7O14733 419 aa14.02□□□□□ -0.16
ECHDC1-209ENST00000454591 NPHP1O15259 732 aa14.02□□□□□ -0.16
ECHDC1-209ENST00000454591 PDHBP11177 359 aa14.02□□□□□ -0.16
ECHDC1-209ENST00000454591 HNRNPH3P31942 346 aaKnown RBP14.02□□□□□ -0.16
ECHDC1-209ENST00000454591 PIP4K2BP78356 416 aa14.02□□□□□ -0.16
ECHDC1-209ENST00000454591 WDR59Q6PJI9 974 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms