RNA–Protein interactions for RNA: ENST00000452441.5

DDR1-239, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDR1, Length 3,857 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-239ENST00000452441 FCER1AP12319 257 aa12.47□□□□□ -0.41
DDR1-239ENST00000452441 HLTFQ14527 1009 aaKnown RBP eCLIP12.47□□□□□ -0.41
DDR1-239ENST00000452441 DCAF17Q5H9S7 520 aaPredicted RBP12.47□□□□□ -0.41
DDR1-239ENST00000452441 TNS2Q63HR2 1409 aa12.47□□□□□ -0.41
DDR1-239ENST00000452441 RRAGAQ7L523 313 aa12.47□□□□□ -0.41
DDR1-239ENST00000452441 KRT26Q7Z3Y9 468 aa12.47□□□□□ -0.41
DDR1-239ENST00000452441 SNX29Q8TEQ0 813 aa12.47□□□□□ -0.41
DDR1-239ENST00000452441 UTRNP46939 3433 aa12.47□□□□□ -0.41
DDR1-239ENST00000452441 POTEMA6NI47 508 aa12.47□□□□□ -0.41
DDR1-239ENST00000452441 GNA11P29992 359 aa12.47□□□□□ -0.41
DDR1-239ENST00000452441 CHRNA5P30532 468 aa12.47□□□□□ -0.41
DDR1-239ENST00000452441 CYP4A11Q02928 519 aa12.47□□□□□ -0.41
DDR1-239ENST00000452441 SF3B3Q15393 1217 aaKnown RBP12.47□□□□□ -0.41
DDR1-239ENST00000452441 ZFYVE27Q5T4F4 411 aa12.47□□□□□ -0.41
DDR1-239ENST00000452441 PRR5LQ6MZQ0 368 aa12.47□□□□□ -0.41
DDR1-239ENST00000452441 TC2NQ8N9U0 490 aa12.47□□□□□ -0.41
DDR1-239ENST00000452441 SHANK3Q9BYB0 1731 aa12.47□□□□□ -0.41
DDR1-239ENST00000452441 PARP4Q9UKK3 1724 aaKnown RBP12.47□□□□□ -0.41
DDR1-239ENST00000452441 SLC1A4P43007 532 aa12.47□□□□□ -0.41
DDR1-239ENST00000452441 CDK8P49336 464 aa12.47□□□□□ -0.41
DDR1-239ENST00000452441 KIF5AQ12840 1032 aa12.47□□□□□ -0.41
DDR1-239ENST00000452441 ALX1Q15699 326 aa12.47□□□□□ -0.41
DDR1-239ENST00000452441 TMTC3Q6ZXV5 915 aa12.47□□□□□ -0.41
DDR1-239ENST00000452441 MIGA2Q7L4E1 593 aa12.47□□□□□ -0.41
DDR1-239ENST00000452441 TMEM60Q9H2L4 133 aa12.47□□□□□ -0.41
DDR1-239ENST00000452441 CALCOCO1Q9P1Z2 691 aa12.47□□□□□ -0.41
DDR1-239ENST00000452441 BCS1LQ9Y276 419 aa12.47□□□□□ -0.41
DDR1-239ENST00000452441 ADAMTS3O15072 1205 aa12.46□□□□□ -0.41
DDR1-239ENST00000452441 PPIP5K2O43314 1243 aa12.46□□□□□ -0.41
DDR1-239ENST00000452441 STX10O60499 249 aa12.46□□□□□ -0.41
DDR1-239ENST00000452441 GRIK5Q16478 980 aa12.46□□□□□ -0.41
DDR1-239ENST00000452441 LARGE2Q8N3Y3 721 aa12.46□□□□□ -0.41
DDR1-239ENST00000452441 ENOX1Q8TC92 643 aaKnown RBP12.46□□□□□ -0.41
DDR1-239ENST00000452441 NAPGQ99747 312 aaPredicted RBP12.46□□□□□ -0.41
DDR1-239ENST00000452441 GOLGA6L9A6NEM1 432 aa12.46□□□□□ -0.41
DDR1-239ENST00000452441 MEIS1O00470 390 aa12.46□□□□□ -0.41
DDR1-239ENST00000452441 NONOQ15233 471 aaKnown RBP eCLIP12.46□□□□□ -0.41
DDR1-239ENST00000452441 PROCA1Q8NCQ7 364 aaPredicted RBP12.46□□□□□ -0.41
DDR1-239ENST00000452441 TBCKQ8TEA7 893 aa12.46□□□□□ -0.41
DDR1-239ENST00000452441 FERMT2Q96AC1 680 aa12.46□□□□□ -0.41
DDR1-239ENST00000452441 TMEM47Q9BQJ4 181 aa12.46□□□□□ -0.41
DDR1-239ENST00000452441 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.46□□□□□ -0.41
DDR1-239ENST00000452441 LEMD3Q9Y2U8 911 aa12.46□□□□□ -0.41
DDR1-239ENST00000452441 PPEF1O14829 653 aaPredicted RBP12.46□□□□□ -0.42
DDR1-239ENST00000452441 EIF3JO75822 258 aaKnown RBP12.46□□□□□ -0.42
DDR1-239ENST00000452441 PLCG1P19174 1290 aa12.46□□□□□ -0.42
DDR1-239ENST00000452441 ATP2B4P23634 1241 aa12.46□□□□□ -0.42
DDR1-239ENST00000452441 SLC7A5Q01650 507 aa12.46□□□□□ -0.42
DDR1-239ENST00000452441 CCDC174Q6PII3 467 aa12.46□□□□□ -0.42
DDR1-239ENST00000452441 REXO1Q8N1G1 1221 aaKnown RBP12.46□□□□□ -0.42
DDR1-239ENST00000452441 RAB34Q9BZG1 259 aa12.46□□□□□ -0.42
DDR1-239ENST00000452441 RMND1Q9NWS8 449 aa12.46□□□□□ -0.42
DDR1-239ENST00000452441 SMARCAL1Q9NZC9 954 aa12.46□□□□□ -0.42
DDR1-239ENST00000452441 EPN1Q9Y6I3 576 aaPredicted RBP12.46□□□□□ -0.42
DDR1-239ENST00000452441 WDR19Q8NEZ3 1342 aa12.46□□□□□ -0.42
DDR1-239ENST00000452441 RAPGEF1Q13905 1077 aa12.45□□□□□ -0.42
DDR1-239ENST00000452441 TMEM139Q8IV31 216 aa12.45□□□□□ -0.42
DDR1-239ENST00000452441 KSR1Q8IVT5 923 aa12.45□□□□□ -0.42
DDR1-239ENST00000452441 BRIP1Q9BX63 1249 aa12.45□□□□□ -0.42
DDR1-239ENST00000452441 FAM53CQ9NYF3 392 aa12.45□□□□□ -0.42
DDR1-239ENST00000452441 ATP2C2O75185 946 aa12.45□□□□□ -0.42
DDR1-239ENST00000452441 KRT79Q5XKE5 535 aa12.45□□□□□ -0.42
DDR1-239ENST00000452441 ADAT2Q7Z6V5 191 aaKnown RBP12.45□□□□□ -0.42
DDR1-239ENST00000452441 DNAAF5Q86Y56 855 aa12.45□□□□□ -0.42
DDR1-239ENST00000452441 JAKMIP2Q96AA8 810 aa12.45□□□□□ -0.42
DDR1-239ENST00000452441 USP17L5A8MUK1 530 aa12.45□□□□□ -0.42
DDR1-239ENST00000452441 H0YIN7 160 aa12.45□□□□□ -0.42
DDR1-239ENST00000452441 PRPF3O43395 683 aaKnown RBP12.45□□□□□ -0.42
DDR1-239ENST00000452441 C21orf2O43822 256 aa12.45□□□□□ -0.42
DDR1-239ENST00000452441 ZEB2O60315 1214 aa12.45□□□□□ -0.42
DDR1-239ENST00000452441 SASH3O75995 380 aa12.45□□□□□ -0.42
DDR1-239ENST00000452441 ZRANB2O95218 330 aaKnown RBP eCLIP12.45□□□□□ -0.42
DDR1-239ENST00000452441 CFBP00751 764 aa12.45□□□□□ -0.42
DDR1-239ENST00000452441 HERC4Q5GLZ8 1057 aaPredicted RBP12.45□□□□□ -0.42
DDR1-239ENST00000452441 CC2D1AQ6P1N0 951 aaPredicted RBP12.45□□□□□ -0.42
DDR1-239ENST00000452441 CEP95Q96GE4 821 aa12.45□□□□□ -0.42
DDR1-239ENST00000452441 TUBGCP2Q9BSJ2 902 aa12.45□□□□□ -0.42
DDR1-239ENST00000452441 ATF5Q9Y2D1 282 aaPredicted RBP12.45□□□□□ -0.42
DDR1-239ENST00000452441 PAPPAQ13219 1627 aa12.45□□□□□ -0.42
DDR1-239ENST00000452441 DDAH1O94760 285 aa12.44□□□□□ -0.42
DDR1-239ENST00000452441 HNRNPH2P55795 449 aaKnown RBP12.44□□□□□ -0.42
DDR1-239ENST00000452441 CYP26C1Q6V0L0 522 aa12.44□□□□□ -0.42
DDR1-239ENST00000452441 SLC30A10Q6XR72 485 aa12.44□□□□□ -0.42
DDR1-239ENST00000452441 GPR161Q8N6U8 529 aaKnown RBP12.44□□□□□ -0.42
DDR1-239ENST00000452441 RIOK1Q9BRS2 568 aaKnown RBP12.44□□□□□ -0.42
DDR1-239ENST00000452441 AKAP11Q9UKA4 1901 aa12.44□□□□□ -0.42
DDR1-239ENST00000452441 PNPLA7Q6ZV29 1317 aa12.44□□□□□ -0.42
DDR1-239ENST00000452441 TAL1P17542 331 aaPredicted RBP12.44□□□□□ -0.42
DDR1-239ENST00000452441 TXNRD1Q16881 649 aa12.44□□□□□ -0.42
DDR1-239ENST00000452441 LONRF2Q1L5Z9 754 aa12.44□□□□□ -0.42
DDR1-239ENST00000452441 ODF2Q5BJF6 829 aa12.44□□□□□ -0.42
DDR1-239ENST00000452441 CCDC155Q8N6L0 562 aa12.44□□□□□ -0.42
DDR1-239ENST00000452441 SPAG5Q96R06 1193 aa12.44□□□□□ -0.42
DDR1-239ENST00000452441 TRIM31Q9BZY9 425 aa12.44□□□□□ -0.42
DDR1-239ENST00000452441 AGPAT5Q9NUQ2 364 aa12.44□□□□□ -0.42
DDR1-239ENST00000452441 TTC26A0AVF1 554 aa12.44□□□□□ -0.42
DDR1-239ENST00000452441 ZNF185O15231 689 aa12.44□□□□□ -0.42
DDR1-239ENST00000452441 CYP2C19P33261 490 aa12.44□□□□□ -0.42
DDR1-239ENST00000452441 VPS72Q15906 364 aa12.44□□□□□ -0.42
DDR1-239ENST00000452441 CALCRLQ16602 461 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms