RNA–Protein interactions for RNA: ENST00000447439.6

KLHL3-202, Transcript of kelch like family member 3, humanhuman

TSL 1 (best)

Gene KLHL3, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL3-202ENST00000447439 SMC1AQ14683 1233 aaKnown RBP10.58□□□□□ -0.72
KLHL3-202ENST00000447439 TTI2Q6NXR4 508 aa10.58□□□□□ -0.72
KLHL3-202ENST00000447439 AMOTL1Q8IY63 956 aa10.58□□□□□ -0.72
KLHL3-202ENST00000447439 GLIS3Q8NEA6 775 aa10.58□□□□□ -0.72
KLHL3-202ENST00000447439 TRERF1Q96PN7 1200 aa10.58□□□□□ -0.72
KLHL3-202ENST00000447439 FUT8Q9BYC5 575 aa10.58□□□□□ -0.72
KLHL3-202ENST00000447439 GPCPD1Q9NPB8 672 aa10.58□□□□□ -0.72
KLHL3-202ENST00000447439 EPN1Q9Y6I3 576 aaPredicted RBP10.58□□□□□ -0.72
KLHL3-202ENST00000447439 LGALS16A8MUM7 142 aa10.58□□□□□ -0.72
KLHL3-202ENST00000447439 H7C1D1 291 aa10.58□□□□□ -0.72
KLHL3-202ENST00000447439 N4BP1O75113 896 aaKnown RBP10.58□□□□□ -0.72
KLHL3-202ENST00000447439 TDP2O95551 362 aa10.58□□□□□ -0.72
KLHL3-202ENST00000447439 PLEKP08567 350 aaPredicted RBP10.58□□□□□ -0.72
KLHL3-202ENST00000447439 OR52Z1P0C646 297 aa10.58□□□□□ -0.72
KLHL3-202ENST00000447439 CT47A1Q5JQC4 288 aaPredicted RBP10.58□□□□□ -0.72
KLHL3-202ENST00000447439 NAPGQ99747 312 aaPredicted RBP10.58□□□□□ -0.72
KLHL3-202ENST00000447439 CD209Q9NNX6 404 aa10.58□□□□□ -0.72
KLHL3-202ENST00000447439 KBTBD4Q9NVX7 518 aa10.58□□□□□ -0.72
KLHL3-202ENST00000447439 SNED1Q8TER0 1413 aa10.58□□□□□ -0.72
KLHL3-202ENST00000447439 UBAP1LF5GYI3 381 aa10.57□□□□□ -0.72
KLHL3-202ENST00000447439 PSMA7O14818 248 aa10.57□□□□□ -0.72
KLHL3-202ENST00000447439 SLC37A4O43826 429 aa10.57□□□□□ -0.72
KLHL3-202ENST00000447439 RAD21O60216 631 aa10.57□□□□□ -0.72
KLHL3-202ENST00000447439 ZMYND10O75800 440 aa10.57□□□□□ -0.72
KLHL3-202ENST00000447439 ATP1A1P05023 1023 aaKnown RBP10.57□□□□□ -0.72
KLHL3-202ENST00000447439 VSNL1P62760 191 aa10.57□□□□□ -0.72
KLHL3-202ENST00000447439 SPAG1Q07617 926 aa10.57□□□□□ -0.72
KLHL3-202ENST00000447439 MFSD14BQ5SR56 506 aa10.57□□□□□ -0.72
KLHL3-202ENST00000447439 ZNF804AQ7Z570 1209 aa10.57□□□□□ -0.72
KLHL3-202ENST00000447439 GIMAP8Q8ND71 665 aaPredicted RBP10.57□□□□□ -0.72
KLHL3-202ENST00000447439 CCDC148Q8NFR7 591 aa10.57□□□□□ -0.72
KLHL3-202ENST00000447439 SMCR8Q8TEV9 937 aaPredicted RBP10.57□□□□□ -0.72
KLHL3-202ENST00000447439 GDAP1L1Q96MZ0 367 aa10.57□□□□□ -0.72
KLHL3-202ENST00000447439 NUDT12Q9BQG2 462 aa10.57□□□□□ -0.72
KLHL3-202ENST00000447439 TUBGCP2Q9BSJ2 902 aa10.57□□□□□ -0.72
KLHL3-202ENST00000447439 MMTAG2Q9BU76 263 aaKnown RBP10.57□□□□□ -0.72
KLHL3-202ENST00000447439 ABCB6Q9NP58 842 aa10.57□□□□□ -0.72
KLHL3-202ENST00000447439 SH3GLB2Q9NR46 395 aa10.57□□□□□ -0.72
KLHL3-202ENST00000447439 MAGEC2Q9UBF1 373 aaPredicted RBP10.57□□□□□ -0.72
KLHL3-202ENST00000447439 TTF2Q9UNY4 1162 aaKnown RBP10.57□□□□□ -0.72
KLHL3-202ENST00000447439 LUC7L2Q9Y383 392 aaKnown RBP10.57□□□□□ -0.72
KLHL3-202ENST00000447439 MAST2Q6P0Q8 1798 aa10.57□□□□□ -0.72
KLHL3-202ENST00000447439 PDS5AQ29RF7 1337 aaKnown RBP10.57□□□□□ -0.72
KLHL3-202ENST00000447439 POTEMA6NI47 508 aa10.57□□□□□ -0.72
KLHL3-202ENST00000447439 TRIM21P19474 475 aaKnown RBP10.57□□□□□ -0.72
KLHL3-202ENST00000447439 MRPS25P82663 173 aaKnown RBP10.57□□□□□ -0.72
KLHL3-202ENST00000447439 NONOQ15233 471 aaKnown RBP eCLIP10.57□□□□□ -0.72
KLHL3-202ENST00000447439 LRRC41Q15345 812 aa10.57□□□□□ -0.72
KLHL3-202ENST00000447439 UBE2SQ16763 222 aa10.57□□□□□ -0.72
KLHL3-202ENST00000447439 TRAPPC3LQ5T215 181 aa10.57□□□□□ -0.72
KLHL3-202ENST00000447439 PRR5LQ6MZQ0 368 aa10.57□□□□□ -0.72
KLHL3-202ENST00000447439 KRT26Q7Z3Y9 468 aa10.57□□□□□ -0.72
KLHL3-202ENST00000447439 ZNF507Q8TCN5 953 aa10.57□□□□□ -0.72
KLHL3-202ENST00000447439 RPGRQ92834 1020 aaKnown RBP10.57□□□□□ -0.72
KLHL3-202ENST00000447439 CNOT6LQ96LI5 555 aaKnown RBP10.57□□□□□ -0.72
KLHL3-202ENST00000447439 TRIM9Q9C026 710 aa10.57□□□□□ -0.72
KLHL3-202ENST00000447439 LACRTQ9GZZ8 138 aa10.57□□□□□ -0.72
KLHL3-202ENST00000447439 LRRC4BQ9NT99 713 aa10.57□□□□□ -0.72
KLHL3-202ENST00000447439 TCP11L1Q9NUJ3 509 aa10.57□□□□□ -0.72
KLHL3-202ENST00000447439 EXOC1Q9NV70 894 aa10.57□□□□□ -0.72
KLHL3-202ENST00000447439 MYH8P13535 1937 aa10.57□□□□□ -0.72
KLHL3-202ENST00000447439 MACROD2A1Z1Q3 448 aa10.56□□□□□ -0.72
KLHL3-202ENST00000447439 EPHB6O15197 1021 aa10.56□□□□□ -0.72
KLHL3-202ENST00000447439 ZNF185O15231 689 aa10.56□□□□□ -0.72
KLHL3-202ENST00000447439 RHOBTB3O94955 611 aa10.56□□□□□ -0.72
KLHL3-202ENST00000447439 FECHP22830 423 aa10.56□□□□□ -0.72
KLHL3-202ENST00000447439 SLC16A2P36021 539 aa10.56□□□□□ -0.72
KLHL3-202ENST00000447439 MTIF2P46199 727 aaKnown RBP10.56□□□□□ -0.72
KLHL3-202ENST00000447439 GNAQP50148 359 aa10.56□□□□□ -0.72
KLHL3-202ENST00000447439 CCDC122Q5T0U0 273 aa10.56□□□□□ -0.72
KLHL3-202ENST00000447439 KIAA0895Q8NCT3 520 aa10.56□□□□□ -0.72
KLHL3-202ENST00000447439 OR8K1Q8NGG5 319 aa10.56□□□□□ -0.72
KLHL3-202ENST00000447439 ANKS1AQ92625 1134 aa10.56□□□□□ -0.72
KLHL3-202ENST00000447439 CCDC51Q96ER9 411 aa10.56□□□□□ -0.72
KLHL3-202ENST00000447439 RRP36Q96EU6 259 aaKnown RBP10.56□□□□□ -0.72
KLHL3-202ENST00000447439 DRC1Q96MC2 740 aa10.56□□□□□ -0.72
KLHL3-202ENST00000447439 POLLQ9UGP5 575 aa10.56□□□□□ -0.72
KLHL3-202ENST00000447439 ZNF831Q5JPB2 1677 aa10.56□□□□□ -0.72
KLHL3-202ENST00000447439 C6orf229H3BNL8 230 aa10.56□□□□□ -0.72
KLHL3-202ENST00000447439 TBC1D8BQ0IIM8 1120 aa10.56□□□□□ -0.72
KLHL3-202ENST00000447439 SOGA3Q5TF21 947 aa10.56□□□□□ -0.72
KLHL3-202ENST00000447439 NEK8Q86SG6 692 aa10.56□□□□□ -0.72
KLHL3-202ENST00000447439 GSPT2Q8IYD1 628 aaKnown RBP10.56□□□□□ -0.72
KLHL3-202ENST00000447439 CCDC155Q8N6L0 562 aa10.56□□□□□ -0.72
KLHL3-202ENST00000447439 P2RX5Q93086 422 aa10.56□□□□□ -0.72
KLHL3-202ENST00000447439 ZMYND12Q9H0C1 365 aa10.56□□□□□ -0.72
KLHL3-202ENST00000447439 SEMA6BQ9H3T3 888 aa10.56□□□□□ -0.72
KLHL3-202ENST00000447439 PDE11AQ9HCR9 933 aa10.56□□□□□ -0.72
KLHL3-202ENST00000447439 SEC63Q9UGP8 760 aaKnown RBP10.56□□□□□ -0.72
KLHL3-202ENST00000447439 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.55□□□□□ -0.72
KLHL3-202ENST00000447439 PHACTR2O75167 634 aa10.55□□□□□ -0.72
KLHL3-202ENST00000447439 IDEP14735 1019 aa10.55□□□□□ -0.72
KLHL3-202ENST00000447439 AKR1B1P15121 316 aa10.55□□□□□ -0.72
KLHL3-202ENST00000447439 KCNA4P22459 653 aa10.55□□□□□ -0.72
KLHL3-202ENST00000447439 RHBDL3P58872 404 aa10.55□□□□□ -0.72
KLHL3-202ENST00000447439 GTF2IP78347 998 aa10.55□□□□□ -0.72
KLHL3-202ENST00000447439 GSTO1P78417 241 aa10.55□□□□□ -0.72
KLHL3-202ENST00000447439 STIM1Q13586 685 aa10.55□□□□□ -0.72
KLHL3-202ENST00000447439 SHROOM1Q2M3G4 852 aaPredicted RBP10.55□□□□□ -0.72
KLHL3-202ENST00000447439 TTBK2Q6IQ55 1244 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms