RNA–Protein interactions for RNA: ENST00000441871.5

R3HDM1-209, Transcript of R3H domain containing 1, humanhuman

TSL 4

Gene R3HDM1, Length 556 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-209ENST00000441871 INO80B-WBP1J3KQ70 363 aa4.49□□□□□ -1.69
R3HDM1-209ENST00000441871 IRS4O14654 1257 aaPredicted RBP4.49□□□□□ -1.69
R3HDM1-209ENST00000441871 NEMFO60524 1076 aa4.49□□□□□ -1.69
R3HDM1-209ENST00000441871 CLASP2O75122 1294 aaKnown RBP4.49□□□□□ -1.69
R3HDM1-209ENST00000441871 PTCD1O75127 700 aaKnown RBP4.49□□□□□ -1.69
R3HDM1-209ENST00000441871 DKK1O94907 266 aa4.49□□□□□ -1.69
R3HDM1-209ENST00000441871 ABLIM3O94929 683 aa4.49□□□□□ -1.69
R3HDM1-209ENST00000441871 CD4P01730 458 aa4.49□□□□□ -1.69
R3HDM1-209ENST00000441871 CYP17A1P05093 508 aa4.49□□□□□ -1.69
R3HDM1-209ENST00000441871 VSIG8P0DPA2 414 aa4.49□□□□□ -1.69
R3HDM1-209ENST00000441871 ATP6V1B1P15313 513 aa4.49□□□□□ -1.69
R3HDM1-209ENST00000441871 RPS2P15880 293 aaKnown RBP4.49□□□□□ -1.69
R3HDM1-209ENST00000441871 MX2P20592 715 aa4.49□□□□□ -1.69
R3HDM1-209ENST00000441871 MUTP22033 750 aa4.49□□□□□ -1.69
R3HDM1-209ENST00000441871 ITGA6P23229 1130 aa4.49□□□□□ -1.69
R3HDM1-209ENST00000441871 MPSTP25325 297 aa4.49□□□□□ -1.69
R3HDM1-209ENST00000441871 ECE1P42892 770 aa4.49□□□□□ -1.69
R3HDM1-209ENST00000441871 SCTRP47872 440 aa4.49□□□□□ -1.69
R3HDM1-209ENST00000441871 MAN2A2P49641 1150 aa4.49□□□□□ -1.69
R3HDM1-209ENST00000441871 LIMK1P53667 647 aa4.49□□□□□ -1.69
R3HDM1-209ENST00000441871 MPP1Q00013 466 aa4.49□□□□□ -1.69
R3HDM1-209ENST00000441871 LRRC74AQ0VAA2 488 aa4.49□□□□□ -1.69
R3HDM1-209ENST00000441871 ZBTB17Q13105 803 aa4.49□□□□□ -1.69
R3HDM1-209ENST00000441871 CLN3Q13286 438 aa4.49□□□□□ -1.69
R3HDM1-209ENST00000441871 PRPF4BQ13523 1007 aaKnown RBP4.49□□□□□ -1.69
R3HDM1-209ENST00000441871 TRIM14Q14142 442 aa4.49□□□□□ -1.69
R3HDM1-209ENST00000441871 NAA30Q147X3 362 aaPredicted RBP4.49□□□□□ -1.69
R3HDM1-209ENST00000441871 PSMD6Q15008 389 aa4.49□□□□□ -1.69
R3HDM1-209ENST00000441871 ACAP1Q15027 740 aa4.49□□□□□ -1.69
R3HDM1-209ENST00000441871 TNNI3KQ59H18 835 aa4.49□□□□□ -1.69
R3HDM1-209ENST00000441871 WDR44Q5JSH3 913 aa4.49□□□□□ -1.69
R3HDM1-209ENST00000441871 GNASQ5JWF2 1037 aa4.49□□□□□ -1.69
R3HDM1-209ENST00000441871 PERM1Q5SV97 790 aa4.49□□□□□ -1.69
R3HDM1-209ENST00000441871 KIAA0319Q5VV43 1072 aa4.49□□□□□ -1.69
R3HDM1-209ENST00000441871 ITPRIPL1Q6GPH6 555 aa4.49□□□□□ -1.69
R3HDM1-209ENST00000441871 RETSATQ6NUM9 610 aa4.49□□□□□ -1.69
R3HDM1-209ENST00000441871 TMEM214Q6NUQ4 689 aaKnown RBP4.49□□□□□ -1.69
R3HDM1-209ENST00000441871 CRTC1Q6UUV9 634 aa4.49□□□□□ -1.69
R3HDM1-209ENST00000441871 FAM196AQ6ZSG2 479 aa4.49□□□□□ -1.69
R3HDM1-209ENST00000441871 IQCA1Q86XH1 822 aa4.49□□□□□ -1.69
R3HDM1-209ENST00000441871 DZIP1Q86YF9 867 aaKnown RBP4.49□□□□□ -1.69
R3HDM1-209ENST00000441871 FAM186BQ8IYM0 893 aa4.49□□□□□ -1.69
R3HDM1-209ENST00000441871 VWA5B2Q8N398 1253 aa4.49□□□□□ -1.69
R3HDM1-209ENST00000441871 AFAP1L2Q8N4X5 818 aa4.49□□□□□ -1.69
R3HDM1-209ENST00000441871 SPATA5Q8NB90 893 aa4.49□□□□□ -1.69
R3HDM1-209ENST00000441871 DRAXINQ8NBI3 349 aaPredicted RBP4.49□□□□□ -1.69
R3HDM1-209ENST00000441871 RIN3Q8TB24 985 aa4.49□□□□□ -1.69
R3HDM1-209ENST00000441871 KIAA1524Q8TCG1 905 aa4.49□□□□□ -1.69
R3HDM1-209ENST00000441871 FNIP1Q8TF40 1166 aa4.49□□□□□ -1.69
R3HDM1-209ENST00000441871 CCT6BQ92526 530 aa4.49□□□□□ -1.69
R3HDM1-209ENST00000441871 ALKBH8Q96BT7 664 aaKnown RBP4.49□□□□□ -1.69
R3HDM1-209ENST00000441871 TSGA13Q96PP4 275 aa4.49□□□□□ -1.69
R3HDM1-209ENST00000441871 ZSCAN10Q96SZ4 725 aaPredicted RBP4.49□□□□□ -1.69
R3HDM1-209ENST00000441871 FAM129BQ96TA1 746 aa4.49□□□□□ -1.69
R3HDM1-209ENST00000441871 GAS2L1Q99501 681 aaPredicted RBP4.49□□□□□ -1.69
R3HDM1-209ENST00000441871 BARD1Q99728 777 aaKnown RBP4.49□□□□□ -1.69
R3HDM1-209ENST00000441871 SLC7A5P2Q9GIP4 190 aa4.49□□□□□ -1.69
R3HDM1-209ENST00000441871 NIF3L1Q9GZT8 377 aa4.49□□□□□ -1.69
R3HDM1-209ENST00000441871 OSBPL3Q9H4L5 887 aa4.49□□□□□ -1.69
R3HDM1-209ENST00000441871 MED4Q9NPJ6 270 aa4.49□□□□□ -1.69
R3HDM1-209ENST00000441871 ST7Q9NRC1 585 aa4.49□□□□□ -1.69
R3HDM1-209ENST00000441871 RAB6BQ9NRW1 208 aa4.49□□□□□ -1.69
R3HDM1-209ENST00000441871 SLC5A4Q9NY91 659 aa4.49□□□□□ -1.69
R3HDM1-209ENST00000441871 CEP72Q9P209 647 aa4.49□□□□□ -1.69
R3HDM1-209ENST00000441871 PDP2Q9P2J9 529 aa4.49□□□□□ -1.69
R3HDM1-209ENST00000441871 DKK3Q9UBP4 350 aa4.49□□□□□ -1.69
R3HDM1-209ENST00000441871 ADAMTS1Q9UHI8 967 aa4.49□□□□□ -1.69
R3HDM1-209ENST00000441871 C2CD2Q9Y426 696 aa4.49□□□□□ -1.69
R3HDM1-209ENST00000441871 TRIM17Q9Y577 477 aa4.49□□□□□ -1.69
R3HDM1-209ENST00000441871 PHLDB1Q86UU1 1377 aa4.49□□□□□ -1.69
R3HDM1-209ENST00000441871 hCG_1642624A0A1W2PR95 340 aa4.48□□□□□ -1.69
R3HDM1-209ENST00000441871 CCDC66A2RUB6 948 aa4.48□□□□□ -1.69
R3HDM1-209ENST00000441871 H0YHG0 523 aa4.48□□□□□ -1.69
R3HDM1-209ENST00000441871 M0QX08 132 aa4.48□□□□□ -1.69
R3HDM1-209ENST00000441871 PLOD2O00469 737 aa4.48□□□□□ -1.69
R3HDM1-209ENST00000441871 CASQ2O14958 399 aaPredicted RBP4.48□□□□□ -1.69
R3HDM1-209ENST00000441871 ZBTB7BO15156 539 aaPredicted RBP4.48□□□□□ -1.69
R3HDM1-209ENST00000441871 PMM2O15305 246 aa4.48□□□□□ -1.69
R3HDM1-209ENST00000441871 DDX3YO15523 660 aaKnown RBP4.48□□□□□ -1.69
R3HDM1-209ENST00000441871 LGR5O75473 907 aa4.48□□□□□ -1.69
R3HDM1-209ENST00000441871 TNFRSF21O75509 655 aa4.48□□□□□ -1.69
R3HDM1-209ENST00000441871 PYGLP06737 847 aa4.48□□□□□ -1.69
R3HDM1-209ENST00000441871 TSPY4P0CV99 314 aa4.48□□□□□ -1.69
R3HDM1-209ENST00000441871 TSPY10P0CW01 314 aa4.48□□□□□ -1.69
R3HDM1-209ENST00000441871 HSD3B1P14060 373 aa4.48□□□□□ -1.69
R3HDM1-209ENST00000441871 XPAP23025 273 aaPredicted RBP4.48□□□□□ -1.69
R3HDM1-209ENST00000441871 HSPA1LP34931 641 aa4.48□□□□□ -1.69
R3HDM1-209ENST00000441871 CD86P42081 329 aa4.48□□□□□ -1.69
R3HDM1-209ENST00000441871 MXI1P50539 228 aa4.48□□□□□ -1.69
R3HDM1-209ENST00000441871 ATP1A2P50993 1020 aa4.48□□□□□ -1.69
R3HDM1-209ENST00000441871 CCNG2Q16589 344 aa4.48□□□□□ -1.69
R3HDM1-209ENST00000441871 SHROOM1Q2M3G4 852 aaPredicted RBP4.48□□□□□ -1.69
R3HDM1-209ENST00000441871 TUBB8Q3ZCM7 444 aa4.48□□□□□ -1.69
R3HDM1-209ENST00000441871 MINDY4Q4G0A6 757 aa4.48□□□□□ -1.69
R3HDM1-209ENST00000441871 GPATCH4Q5T3I0 446 aaKnown RBP4.48□□□□□ -1.69
R3HDM1-209ENST00000441871 RUFY3Q7L099 469 aa4.48□□□□□ -1.69
R3HDM1-209ENST00000441871 NECAB2Q7Z6G3 386 aa4.48□□□□□ -1.69
R3HDM1-209ENST00000441871 TPH2Q8IWU9 490 aa4.48□□□□□ -1.69
R3HDM1-209ENST00000441871 RNF168Q8IYW5 571 aaPredicted RBP4.48□□□□□ -1.69
R3HDM1-209ENST00000441871 RTF1Q92541 710 aaKnown RBP4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms