RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 TBC1D31Q96DN5 1066 aa14.89□□□□□ -0.03
ACTN1-204ENST00000438964 KRT12Q99456 494 aa14.89□□□□□ -0.03
ACTN1-204ENST00000438964 KLC4Q9NSK0 619 aa14.89□□□□□ -0.03
ACTN1-204ENST00000438964 RIPOR2Q9Y4F9 1068 aa14.89□□□□□ -0.03
ACTN1-204ENST00000438964 EIF4E1BA6NMX2 242 aaKnown RBP14.89□□□□□ -0.03
ACTN1-204ENST00000438964 NUTM2BA6NNL0 878 aaPredicted RBP14.89□□□□□ -0.03
ACTN1-204ENST00000438964 NUTM2EB1AL46 878 aaPredicted RBP14.89□□□□□ -0.03
ACTN1-204ENST00000438964 SEMA3EO15041 775 aa14.89□□□□□ -0.03
ACTN1-204ENST00000438964 PCCAP05165 728 aaPredicted RBP14.89□□□□□ -0.03
ACTN1-204ENST00000438964 NR1D1P20393 614 aa14.89□□□□□ -0.03
ACTN1-204ENST00000438964 BCAMP50895 628 aa14.89□□□□□ -0.03
ACTN1-204ENST00000438964 CCDC40Q4G0X9 1142 aa14.89□□□□□ -0.03
ACTN1-204ENST00000438964 KRT28Q7Z3Y7 464 aa14.89□□□□□ -0.03
ACTN1-204ENST00000438964 ADGRA1Q86SQ6 560 aa14.89□□□□□ -0.03
ACTN1-204ENST00000438964 ZNF507Q8TCN5 953 aa14.89□□□□□ -0.03
ACTN1-204ENST00000438964 CCDC114Q96M63 670 aa14.89□□□□□ -0.03
ACTN1-204ENST00000438964 PHF20Q9BVI0 1012 aa14.89□□□□□ -0.03
ACTN1-204ENST00000438964 NOC4LQ9BVI4 516 aaKnown RBP14.89□□□□□ -0.03
ACTN1-204ENST00000438964 ARHGAP20Q9P2F6 1191 aa14.89□□□□□ -0.03
ACTN1-204ENST00000438964 GTPBP6O43824 516 aaPredicted RBP14.88□□□□□ -0.03
ACTN1-204ENST00000438964 USP8P40818 1118 aa14.88□□□□□ -0.03
ACTN1-204ENST00000438964 TRIM14Q14142 442 aa14.88□□□□□ -0.03
ACTN1-204ENST00000438964 HLTFQ14527 1009 aaKnown RBP eCLIP14.88□□□□□ -0.03
ACTN1-204ENST00000438964 UBE3CQ15386 1083 aa14.88□□□□□ -0.03
ACTN1-204ENST00000438964 FAM47AQ5JRC9 791 aa14.88□□□□□ -0.03
ACTN1-204ENST00000438964 AMOTL1Q8IY63 956 aa14.88□□□□□ -0.03
ACTN1-204ENST00000438964 ENAHQ8N8S7 591 aaPredicted RBP14.88□□□□□ -0.03
ACTN1-204ENST00000438964 UIMC1Q96RL1 719 aa14.88□□□□□ -0.03
ACTN1-204ENST00000438964 EXOC1Q9NV70 894 aa14.88□□□□□ -0.03
ACTN1-204ENST00000438964 PCDHA13Q9Y5I0 950 aa14.88□□□□□ -0.03
ACTN1-204ENST00000438964 TRHP20396 242 aaPredicted RBP14.88□□□□□ -0.03
ACTN1-204ENST00000438964 QPCTQ16769 361 aa14.88□□□□□ -0.03
ACTN1-204ENST00000438964 SPATA5Q8NB90 893 aa14.88□□□□□ -0.03
ACTN1-204ENST00000438964 MTMR8Q96EF0 704 aa14.88□□□□□ -0.03
ACTN1-204ENST00000438964 CNOT6LQ96LI5 555 aaKnown RBP14.88□□□□□ -0.03
ACTN1-204ENST00000438964 KRT23Q9C075 422 aa14.88□□□□□ -0.03
ACTN1-204ENST00000438964 SLC40A1Q9NP59 571 aa14.88□□□□□ -0.03
ACTN1-204ENST00000438964 NLRC4Q9NPP4 1024 aa14.88□□□□□ -0.03
ACTN1-204ENST00000438964 TACC1O75410 805 aa14.87□□□□□ -0.03
ACTN1-204ENST00000438964 EPHB4P54760 987 aa14.87□□□□□ -0.03
ACTN1-204ENST00000438964 NPY5RQ15761 445 aa14.87□□□□□ -0.03
ACTN1-204ENST00000438964 ANKRD40Q6AI12 368 aa14.87□□□□□ -0.03
ACTN1-204ENST00000438964 RRAGAQ7L523 313 aa14.87□□□□□ -0.03
ACTN1-204ENST00000438964 NLRP14Q86W24 1093 aa14.87□□□□□ -0.03
ACTN1-204ENST00000438964 ADSSL1Q8N142 457 aa14.87□□□□□ -0.03
ACTN1-204ENST00000438964 MYCBPAPQ8TBZ2 947 aa14.87□□□□□ -0.03
ACTN1-204ENST00000438964 LRRC4CQ9HCJ2 640 aa14.87□□□□□ -0.03
ACTN1-204ENST00000438964 XBP1P17861 261 aa14.87□□□□□ -0.03
ACTN1-204ENST00000438964 VAV2P52735 878 aa14.87□□□□□ -0.03
ACTN1-204ENST00000438964 FERMT2Q96AC1 680 aa14.87□□□□□ -0.03
ACTN1-204ENST00000438964 DONSONQ9NYP3 566 aa14.87□□□□□ -0.03
ACTN1-204ENST00000438964 LRP2BPQ9P2M1 347 aa14.87□□□□□ -0.03
ACTN1-204ENST00000438964 ODF2LQ9ULJ1 636 aa14.87□□□□□ -0.03
ACTN1-204ENST00000438964 RIC1Q4ADV7 1423 aa14.87□□□□□ -0.03
ACTN1-204ENST00000438964 SLC1A4P43007 532 aa14.87□□□□□ -0.03
ACTN1-204ENST00000438964 KIF11P52732 1056 aa14.87□□□□□ -0.03
ACTN1-204ENST00000438964 STK4Q13043 487 aa14.87□□□□□ -0.03
ACTN1-204ENST00000438964 TDRD12Q587J7 1177 aaKnown RBP14.87□□□□□ -0.03
ACTN1-204ENST00000438964 IFIT1BQ5T764 474 aaKnown RBP14.87□□□□□ -0.03
ACTN1-204ENST00000438964 B4GALNT4Q76KP1 1039 aa14.87□□□□□ -0.03
ACTN1-204ENST00000438964 MYH6P13533 1939 aa14.86□□□□□ -0.03
ACTN1-204ENST00000438964 CCDC196A0A1B0GTZ2 297 aa14.86□□□□□ -0.03
ACTN1-204ENST00000438964 DCDC2CA8MYV0 355 aa14.86□□□□□ -0.03
ACTN1-204ENST00000438964 H7C1D1 291 aa14.86□□□□□ -0.03
ACTN1-204ENST00000438964 NEBLO76041 1014 aa14.86□□□□□ -0.03
ACTN1-204ENST00000438964 ATP2C1P98194 919 aaPredicted RBP14.86□□□□□ -0.03
ACTN1-204ENST00000438964 PTGISQ16647 500 aa14.86□□□□□ -0.03
ACTN1-204ENST00000438964 ODF2Q5BJF6 829 aa14.86□□□□□ -0.03
ACTN1-204ENST00000438964 TMEM60Q9H2L4 133 aa14.86□□□□□ -0.03
ACTN1-204ENST00000438964 GOLGA6L7A0A1B0GV03 622 aa14.86□□□□□ -0.03
ACTN1-204ENST00000438964 PPP1R37O75864 691 aa14.86□□□□□ -0.03
ACTN1-204ENST00000438964 NF2P35240 595 aa14.86□□□□□ -0.03
ACTN1-204ENST00000438964 PAFAH1B1P43034 410 aa14.86□□□□□ -0.03
ACTN1-204ENST00000438964 MMP14P50281 582 aa14.86□□□□□ -0.03
ACTN1-204ENST00000438964 NAALADL2Q58DX5 795 aa14.86□□□□□ -0.03
ACTN1-204ENST00000438964 THEMISQ8N1K5 641 aaPredicted RBP14.86□□□□□ -0.03
ACTN1-204ENST00000438964 EHBP1Q8NDI1 1231 aa14.86□□□□□ -0.03
ACTN1-204ENST00000438964 NOC3LQ8WTT2 800 aaKnown RBP14.86□□□□□ -0.03
ACTN1-204ENST00000438964 DUSP9Q99956 384 aaKnown RBP14.86□□□□□ -0.03
ACTN1-204ENST00000438964 EPN3Q9H201 632 aa14.86□□□□□ -0.03
ACTN1-204ENST00000438964 SLC39A2Q9NP94 309 aa14.86□□□□□ -0.03
ACTN1-204ENST00000438964 PLAAQ9Y263 795 aa14.86□□□□□ -0.03
ACTN1-204ENST00000438964 FAM205AQ6ZU69 1335 aa14.86□□□□□ -0.03
ACTN1-204ENST00000438964 DNM1LO00429 736 aa14.85□□□□□ -0.03
ACTN1-204ENST00000438964 PDE8BO95263 885 aa14.85□□□□□ -0.03
ACTN1-204ENST00000438964 MAP3K12Q12852 859 aa14.85□□□□□ -0.03
ACTN1-204ENST00000438964 IQCEQ6IPM2 695 aa14.85□□□□□ -0.03
ACTN1-204ENST00000438964 SRBD1Q8N5C6 995 aaKnown RBP14.85□□□□□ -0.03
ACTN1-204ENST00000438964 PIK3R5Q8WYR1 880 aa14.85□□□□□ -0.03
ACTN1-204ENST00000438964 RPGRIP1Q96KN7 1286 aa14.85□□□□□ -0.03
ACTN1-204ENST00000438964 SH2D4AQ9H788 454 aa14.85□□□□□ -0.03
ACTN1-204ENST00000438964 PDS5AQ29RF7 1337 aaKnown RBP14.85□□□□□ -0.03
ACTN1-204ENST00000438964 A0A0G2JS52 829 aa14.85□□□□□ -0.03
ACTN1-204ENST00000438964 ELF1P32519 619 aa14.85□□□□□ -0.03
ACTN1-204ENST00000438964 DYNLL1P63167 89 aaKnown RBP14.85□□□□□ -0.03
ACTN1-204ENST00000438964 MMGT1Q8N4V1 131 aa14.85□□□□□ -0.03
ACTN1-204ENST00000438964 CASKIN2Q8WXE0 1202 aa14.85□□□□□ -0.03
ACTN1-204ENST00000438964 TLR10Q9BXR5 811 aa14.85□□□□□ -0.03
ACTN1-204ENST00000438964 CPVLQ9H3G5 476 aa14.85□□□□□ -0.03
ACTN1-204ENST00000438964 CNNM2Q9H8M5 875 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms