RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 CPLX3Q8WVH0 158 aa20.92■□□□□ 0.94
CLK1-205ENST00000434813 TAB2Q9NYJ8 693 aa20.92■□□□□ 0.94
CLK1-205ENST00000434813 ATP6V0A2Q9Y487 856 aa20.92■□□□□ 0.94
CLK1-205ENST00000434813 C10orf71Q711Q0 1435 aa20.92■□□□□ 0.94
CLK1-205ENST00000434813 EFCAB8A8MWE9 144 aa20.92■□□□□ 0.94
CLK1-205ENST00000434813 MAP3K9P80192 1104 aa20.92■□□□□ 0.94
CLK1-205ENST00000434813 NEK8Q86SG6 692 aa20.92■□□□□ 0.94
CLK1-205ENST00000434813 LETM2Q2VYF4 491 aa20.91■□□□□ 0.94
CLK1-205ENST00000434813 SOGA3Q5TF21 947 aa20.91■□□□□ 0.94
CLK1-205ENST00000434813 GIMAP8Q8ND71 665 aaPredicted RBP20.91■□□□□ 0.94
CLK1-205ENST00000434813 LRRC15Q8TF66 581 aa20.91■□□□□ 0.94
CLK1-205ENST00000434813 UBXN4Q92575 508 aa20.91■□□□□ 0.94
CLK1-205ENST00000434813 MASTLQ96GX5 879 aa20.91■□□□□ 0.94
CLK1-205ENST00000434813 VPS16Q9H269 839 aa20.91■□□□□ 0.94
CLK1-205ENST00000434813 MRFAP1Q9Y605 127 aa20.91■□□□□ 0.94
CLK1-205ENST00000434813 CCNT1O60563 726 aaKnown RBP20.9■□□□□ 0.94
CLK1-205ENST00000434813 STIM1Q13586 685 aa20.9■□□□□ 0.94
CLK1-205ENST00000434813 ARHGAP29Q52LW3 1261 aa20.9■□□□□ 0.94
CLK1-205ENST00000434813 CABP7Q86V35 215 aa20.9■□□□□ 0.94
CLK1-205ENST00000434813 PIGSQ96S52 555 aa20.9■□□□□ 0.94
CLK1-205ENST00000434813 CARD6Q9BX69 1037 aa20.9■□□□□ 0.94
CLK1-205ENST00000434813 RIOX1Q9H6W3 641 aa20.9■□□□□ 0.94
CLK1-205ENST00000434813 ABHD10Q9NUJ1 306 aa20.9■□□□□ 0.94
CLK1-205ENST00000434813 MAPK8IP1Q9UQF2 711 aa20.9■□□□□ 0.94
CLK1-205ENST00000434813 SUGT1Q9Y2Z0 365 aa20.9■□□□□ 0.94
CLK1-205ENST00000434813 ANKRD31Q8N7Z5 1873 aa20.9■□□□□ 0.94
CLK1-205ENST00000434813 PDHBP11177 359 aa20.9■□□□□ 0.94
CLK1-205ENST00000434813 PLCG1P19174 1290 aa20.9■□□□□ 0.94
CLK1-205ENST00000434813 GABPAQ06546 454 aa20.9■□□□□ 0.94
CLK1-205ENST00000434813 IRF2BP1Q8IU81 584 aa20.9■□□□□ 0.94
CLK1-205ENST00000434813 TMTC1Q8IUR5 882 aa20.9■□□□□ 0.94
CLK1-205ENST00000434813 REXO1Q8N1G1 1221 aaKnown RBP20.9■□□□□ 0.94
CLK1-205ENST00000434813 MYH8P13535 1937 aa20.89■□□□□ 0.94
CLK1-205ENST00000434813 PSMA7O14818 248 aa20.89■□□□□ 0.93
CLK1-205ENST00000434813 EEF1GP26641 437 aaKnown RBP20.89■□□□□ 0.93
CLK1-205ENST00000434813 THAP9Q9H5L6 903 aa20.89■□□□□ 0.93
CLK1-205ENST00000434813 TRIM49BA6NDI0 452 aa20.88■□□□□ 0.93
CLK1-205ENST00000434813 USP17L5A8MUK1 530 aa20.88■□□□□ 0.93
CLK1-205ENST00000434813 ASPRV1Q53RT3 343 aa20.88■□□□□ 0.93
CLK1-205ENST00000434813 COA1Q9GZY4 146 aa20.88■□□□□ 0.93
CLK1-205ENST00000434813 MTMR4Q9NYA4 1195 aa20.88■□□□□ 0.93
CLK1-205ENST00000434813 FAM53CQ9NYF3 392 aa20.88■□□□□ 0.93
CLK1-205ENST00000434813 ZSCAN20P17040 1043 aaPredicted RBP20.88■□□□□ 0.93
CLK1-205ENST00000434813 PMS1P54277 932 aaKnown RBP20.88■□□□□ 0.93
CLK1-205ENST00000434813 GTF2IP78347 998 aa20.88■□□□□ 0.93
CLK1-205ENST00000434813 TBCKQ8TEA7 893 aa20.88■□□□□ 0.93
CLK1-205ENST00000434813 ZNF622Q969S3 477 aaKnown RBP eCLIP20.88■□□□□ 0.938e-9■■■■□ 20.1
CLK1-205ENST00000434813 PLIN2Q99541 437 aa20.88■□□□□ 0.93
CLK1-205ENST00000434813 TTF2Q9UNY4 1162 aaKnown RBP20.88■□□□□ 0.93
CLK1-205ENST00000434813 IGKV6D-41A0A0C4DH26 115 aa20.87■□□□□ 0.93
CLK1-205ENST00000434813 LGALS16A8MUM7 142 aa20.87■□□□□ 0.93
CLK1-205ENST00000434813 SNHG28P0DPA3 235 aa20.87■□□□□ 0.93
CLK1-205ENST00000434813 NOC3LQ8WTT2 800 aaKnown RBP20.87■□□□□ 0.93
CLK1-205ENST00000434813 MYO3BQ8WXR4 1341 aa20.87■□□□□ 0.93
CLK1-205ENST00000434813 DHTKD1Q96HY7 919 aaPredicted RBP20.87■□□□□ 0.93
CLK1-205ENST00000434813 GTPBP4Q9BZE4 634 aaKnown RBP20.87■□□□□ 0.93
CLK1-205ENST00000434813 TRIM9Q9C026 710 aa20.87■□□□□ 0.93
CLK1-205ENST00000434813 PRDM10Q9NQV6 1147 aa20.87■□□□□ 0.93
CLK1-205ENST00000434813 ZNF446Q9NWS9 450 aa20.87■□□□□ 0.93
CLK1-205ENST00000434813 A0A1W2PQC6 194 aa20.87■□□□□ 0.93
CLK1-205ENST00000434813 ERVK-24P63145 666 aa20.87■□□□□ 0.93
CLK1-205ENST00000434813 PPP2R3AQ06190 1150 aa20.87■□□□□ 0.93
CLK1-205ENST00000434813 TTI2Q6NXR4 508 aa20.87■□□□□ 0.93
CLK1-205ENST00000434813 CYP26C1Q6V0L0 522 aa20.87■□□□□ 0.93
CLK1-205ENST00000434813 DPP8Q6V1X1 898 aaPredicted RBP20.87■□□□□ 0.93
CLK1-205ENST00000434813 TRIM47Q96LD4 638 aa20.87■□□□□ 0.93
CLK1-205ENST00000434813 NUP88Q99567 741 aaPredicted RBP20.87■□□□□ 0.93
CLK1-205ENST00000434813 C7orf25Q9BPX7 421 aa20.87■□□□□ 0.93
CLK1-205ENST00000434813 LZTFL1Q9NQ48 299 aa20.87■□□□□ 0.93
CLK1-205ENST00000434813 H0YIN7 160 aa20.86■□□□□ 0.93
CLK1-205ENST00000434813 KIF5CO60282 957 aa20.86■□□□□ 0.93
CLK1-205ENST00000434813 CLCN6P51797 869 aa20.86■□□□□ 0.93
CLK1-205ENST00000434813 UBXN1Q04323 297 aa20.86■□□□□ 0.93
CLK1-205ENST00000434813 CCDC47Q96A33 483 aaKnown RBP20.86■□□□□ 0.93
CLK1-205ENST00000434813 ZC3H12CQ9C0D7 883 aaKnown RBP20.86■□□□□ 0.93
CLK1-205ENST00000434813 UBA5Q9GZZ9 404 aa20.86■□□□□ 0.93
CLK1-205ENST00000434813 VAT1LQ9HCJ6 419 aa20.86■□□□□ 0.93
CLK1-205ENST00000434813 FRMPD2Q68DX3 1309 aaPredicted RBP20.85■□□□□ 0.93
CLK1-205ENST00000434813 PPP1R2P41236 205 aa20.85■□□□□ 0.93
CLK1-205ENST00000434813 PICALMQ13492 652 aa20.85■□□□□ 0.93
CLK1-205ENST00000434813 C2CD5Q86YS7 1000 aa20.85■□□□□ 0.93
CLK1-205ENST00000434813 KRT222Q8N1A0 295 aa20.85■□□□□ 0.93
CLK1-205ENST00000434813 ZMYND15Q9H091 742 aa20.85■□□□□ 0.93
CLK1-205ENST00000434813 ARGLU1Q9NWB6 273 aaPredicted RBP20.85■□□□□ 0.93
CLK1-205ENST00000434813 GREB1LQ9C091 1923 aaPredicted RBP20.85■□□□□ 0.93
CLK1-205ENST00000434813 RNF225M0QZC1 329 aaPredicted RBP20.85■□□□□ 0.93
CLK1-205ENST00000434813 RIMBP2O15034 1052 aa20.85■□□□□ 0.93
CLK1-205ENST00000434813 AKR1B1P15121 316 aa20.85■□□□□ 0.93
CLK1-205ENST00000434813 JAKMIP3Q5VZ66 844 aa20.85■□□□□ 0.93
CLK1-205ENST00000434813 POTEDQ86YR6 584 aa20.85■□□□□ 0.93
CLK1-205ENST00000434813 MB21D1Q8N884 522 aa20.85■□□□□ 0.93
CLK1-205ENST00000434813 ZNF507Q8TCN5 953 aa20.85■□□□□ 0.93
CLK1-205ENST00000434813 MMTAG2Q9BU76 263 aaKnown RBP20.85■□□□□ 0.93
CLK1-205ENST00000434813 IRX2Q9BZI1 471 aaPredicted RBP20.85■□□□□ 0.93
CLK1-205ENST00000434813 EXOC1Q9NV70 894 aa20.85■□□□□ 0.93
CLK1-205ENST00000434813 BIN2Q9UBW5 565 aaPredicted RBP20.85■□□□□ 0.93
CLK1-205ENST00000434813 KRT9P35527 623 aa20.84■□□□□ 0.93
CLK1-205ENST00000434813 ADCY7P51828 1080 aa20.84■□□□□ 0.93
CLK1-205ENST00000434813 COBLL1Q53SF7 1204 aa20.84■□□□□ 0.93
CLK1-205ENST00000434813 PPP1R18Q6NYC8 613 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms