RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 TINF2Q9BSI4 451 aa5.47□□□□□ -1.53
CLK1-204ENST00000432425 IMPACTQ9P2X3 320 aa5.47□□□□□ -1.53
CLK1-204ENST00000432425 ACSL6Q9UKU0 697 aa5.47□□□□□ -1.53
CLK1-204ENST00000432425 STXBP3O00186 592 aa5.47□□□□□ -1.53
CLK1-204ENST00000432425 VAMP4O75379 141 aa5.47□□□□□ -1.53
CLK1-204ENST00000432425 MPOP05164 745 aa5.47□□□□□ -1.53
CLK1-204ENST00000432425 MED14OSP0DP75 135 aa5.47□□□□□ -1.53
CLK1-204ENST00000432425 ZNF143P52747 638 aaPredicted RBP5.47□□□□□ -1.53
CLK1-204ENST00000432425 GRB10Q13322 594 aa5.47□□□□□ -1.53
CLK1-204ENST00000432425 KIR3DS1Q14943 382 aa5.47□□□□□ -1.53
CLK1-204ENST00000432425 RCSD1Q6JBY9 416 aa5.47□□□□□ -1.53
CLK1-204ENST00000432425 RCC1LQ96I51 464 aaKnown RBP5.47□□□□□ -1.53
CLK1-204ENST00000432425 SUSD2Q9UGT4 822 aa5.47□□□□□ -1.53
CLK1-204ENST00000432425 TEX51A0A1B0GUA7 166 aa5.46□□□□□ -1.54
CLK1-204ENST00000432425 A0A1W2PQJ5 194 aa5.46□□□□□ -1.54
CLK1-204ENST00000432425 HRKO00198 91 aa5.46□□□□□ -1.54
CLK1-204ENST00000432425 ABLIM1O14639 778 aa5.46□□□□□ -1.54
CLK1-204ENST00000432425 SDHBP21912 280 aa5.46□□□□□ -1.54
CLK1-204ENST00000432425 DNAJA1P31689 397 aaKnown RBP5.46□□□□□ -1.54
CLK1-204ENST00000432425 CEBPAP49715 358 aaPredicted RBP5.46□□□□□ -1.54
CLK1-204ENST00000432425 SEPHS1P49903 392 aa5.46□□□□□ -1.54
CLK1-204ENST00000432425 ERVFRD-1P60508 538 aa5.46□□□□□ -1.54
CLK1-204ENST00000432425 TMEM62Q0P6H9 643 aa5.46□□□□□ -1.54
CLK1-204ENST00000432425 EEF1DP3Q658K8 133 aa5.46□□□□□ -1.54
CLK1-204ENST00000432425 ARHGEF39Q8N4T4 335 aa5.46□□□□□ -1.54
CLK1-204ENST00000432425 PPP1R14AQ96A00 147 aa5.46□□□□□ -1.54
CLK1-204ENST00000432425 PRKAG3Q9UGI9 489 aa5.46□□□□□ -1.54
CLK1-204ENST00000432425 AKT3Q9Y243 479 aa5.46□□□□□ -1.54
CLK1-204ENST00000432425 BACE2Q9Y5Z0 518 aa5.46□□□□□ -1.54
CLK1-204ENST00000432425 ARID1BQ8NFD5 2236 aaPredicted RBP5.46□□□□□ -1.54
CLK1-204ENST00000432425 MYOCOSA0A1B0GUC4 107 aa5.45□□□□□ -1.54
CLK1-204ENST00000432425 NPIPB6E9PJ23 425 aa5.45□□□□□ -1.54
CLK1-204ENST00000432425 NOP56O00567 594 aaKnown RBP5.45□□□□□ -1.54
CLK1-204ENST00000432425 AURKAO14965 403 aa5.45□□□□□ -1.54
CLK1-204ENST00000432425 KRT1P04264 644 aa5.45□□□□□ -1.54
CLK1-204ENST00000432425 FGRP09769 529 aa5.45□□□□□ -1.54
CLK1-204ENST00000432425 SRSF3P84103 164 aaKnown RBP5.45□□□□□ -1.54
CLK1-204ENST00000432425 POMZP3Q6PJE2 187 aa5.45□□□□□ -1.54
CLK1-204ENST00000432425 ZSCAN18Q8TBC5 510 aaPredicted RBP5.45□□□□□ -1.54
CLK1-204ENST00000432425 CD320Q9NPF0 282 aa5.45□□□□□ -1.54
CLK1-204ENST00000432425 SIRT5Q9NXA8 310 aa5.45□□□□□ -1.54
CLK1-204ENST00000432425 APEX2Q9UBZ4 518 aa5.45□□□□□ -1.54
CLK1-204ENST00000432425 R3HCC1Q9Y3T6 440 aaKnown RBP5.45□□□□□ -1.54
CLK1-204ENST00000432425 C2orf71A6NGG8 1288 aa5.44□□□□□ -1.54
CLK1-204ENST00000432425 NUDT19A8MXV4 375 aa5.44□□□□□ -1.54
CLK1-204ENST00000432425 KCNH1O95259 989 aa5.44□□□□□ -1.54
CLK1-204ENST00000432425 L1CAMP32004 1257 aa5.44□□□□□ -1.54
CLK1-204ENST00000432425 ETFBP38117 255 aa5.44□□□□□ -1.54
CLK1-204ENST00000432425 DLG4P78352 724 aa5.44□□□□□ -1.54
CLK1-204ENST00000432425 RAB3GAP1Q15042 981 aa5.44□□□□□ -1.54
CLK1-204ENST00000432425 KCNA10Q16322 511 aa5.44□□□□□ -1.54
CLK1-204ENST00000432425 C6orf15Q6UXA7 325 aaPredicted RBP5.44□□□□□ -1.54
CLK1-204ENST00000432425 BVESQ8NE79 360 aa5.44□□□□□ -1.54
CLK1-204ENST00000432425 MCMBPQ9BTE3 642 aa5.44□□□□□ -1.54
CLK1-204ENST00000432425 TNFRSF12AQ9NP84 129 aa5.44□□□□□ -1.54
CLK1-204ENST00000432425 SMG5Q9UPR3 1016 aaKnown RBP5.44□□□□□ -1.54
CLK1-204ENST00000432425 DDAH1O94760 285 aa5.43□□□□□ -1.54
CLK1-204ENST00000432425 CORO7P57737 925 aa5.43□□□□□ -1.54
CLK1-204ENST00000432425 MVKQ03426 396 aa5.43□□□□□ -1.54
CLK1-204ENST00000432425 FXNQ16595 210 aa5.43□□□□□ -1.54
CLK1-204ENST00000432425 MCF2L2Q86YR7 1114 aa5.43□□□□□ -1.54
CLK1-204ENST00000432425 FAM178BQ8IXR5 827 aa5.43□□□□□ -1.54
CLK1-204ENST00000432425 LRRC56Q8IYG6 542 aaPredicted RBP5.43□□□□□ -1.54
CLK1-204ENST00000432425 SLC43A3Q8NBI5 491 aa5.43□□□□□ -1.54
CLK1-204ENST00000432425 ZNF408Q9H9D4 720 aa5.43□□□□□ -1.54
CLK1-204ENST00000432425 EMC9Q9Y3B6 208 aa5.43□□□□□ -1.54
CLK1-204ENST00000432425 B2RBV5 119 aa5.43□□□□□ -1.54
CLK1-204ENST00000432425 MSL3P1P0C860 447 aa5.43□□□□□ -1.54
CLK1-204ENST00000432425 PAMP19021 973 aa5.43□□□□□ -1.54
CLK1-204ENST00000432425 VIPR1P32241 457 aa5.43□□□□□ -1.54
CLK1-204ENST00000432425 YBX1P67809 324 aaKnown RBP5.43□□□□□ -1.54
CLK1-204ENST00000432425 CIAPIN1Q6FI81 312 aa5.43□□□□□ -1.54
CLK1-204ENST00000432425 ZNF513Q8N8E2 541 aaPredicted RBP5.43□□□□□ -1.54
CLK1-204ENST00000432425 SGPP1Q9BX95 441 aa5.43□□□□□ -1.54
CLK1-204ENST00000432425 PDLIM7Q9NR12 457 aa5.43□□□□□ -1.54
CLK1-204ENST00000432425 KLHL14Q9P2G3 628 aa5.43□□□□□ -1.54
CLK1-204ENST00000432425 TRBV23OR9-2A0A075B6M9 112 aa5.42□□□□□ -1.54
CLK1-204ENST00000432425 CFPP27918 469 aa5.42□□□□□ -1.54
CLK1-204ENST00000432425 LINC00310P59036 64 aa5.42□□□□□ -1.54
CLK1-204ENST00000432425 RBM10P98175 930 aaKnown RBP5.42□□□□□ -1.54
CLK1-204ENST00000432425 NR1I3Q14994 352 aa5.42□□□□□ -1.54
CLK1-204ENST00000432425 SV2CQ496J9 727 aa5.42□□□□□ -1.54
CLK1-204ENST00000432425 BICRALQ6AI39 1079 aa5.42□□□□□ -1.54
CLK1-204ENST00000432425 TMC6Q7Z403 805 aa5.42□□□□□ -1.54
CLK1-204ENST00000432425 TRIM59Q8IWR1 403 aa5.42□□□□□ -1.54
CLK1-204ENST00000432425 IGSF5Q9NSI5 407 aa5.42□□□□□ -1.54
CLK1-204ENST00000432425 LRP2BPQ9P2M1 347 aa5.42□□□□□ -1.54
CLK1-204ENST00000432425 MBD1Q9UIS9 605 aaPredicted RBP5.42□□□□□ -1.54
CLK1-204ENST00000432425 CNOT6Q9ULM6 557 aaKnown RBP5.42□□□□□ -1.54
CLK1-204ENST00000432425 NPHP3-ACAD11A0A0J9YXS1 232 aa5.41□□□□□ -1.54
CLK1-204ENST00000432425 NUAK1O60285 661 aa5.41□□□□□ -1.54
CLK1-204ENST00000432425 TACR1P25103 407 aa5.41□□□□□ -1.54
CLK1-204ENST00000432425 KRTAP19-4Q3LI73 84 aa5.41□□□□□ -1.54
CLK1-204ENST00000432425 RPTNQ6XPR3 784 aa5.41□□□□□ -1.54
CLK1-204ENST00000432425 CILP2Q8IUL8 1156 aa5.41□□□□□ -1.54
CLK1-204ENST00000432425 GCM1Q9NP62 436 aa5.41□□□□□ -1.54
CLK1-204ENST00000432425 RFXAPO00287 272 aa5.4□□□□□ -1.54
CLK1-204ENST00000432425 SRGAP3O43295 1099 aa5.4□□□□□ -1.54
CLK1-204ENST00000432425 SUSD5O60279 629 aa5.4□□□□□ -1.54
CLK1-204ENST00000432425 SCRN1Q12765 414 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms