RNA–Protein interactions for RNA: ENST00000431473.3

RIMKLA-202, Transcript of ribosomal modification protein rimK like family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIMKLA, Length 8,909 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIMKLA-202ENST00000431473 PIK3CAP42336 1068 aa12.81□□□□□ -0.36
RIMKLA-202ENST00000431473 CACYBPQ9HB71 228 aaKnown RBP12.81□□□□□ -0.36
RIMKLA-202ENST00000431473 PHLPP2Q6ZVD8 1323 aa12.81□□□□□ -0.36
RIMKLA-202ENST00000431473 COPB1P53618 953 aaKnown RBP12.8□□□□□ -0.36
RIMKLA-202ENST00000431473 LLGL1Q15334 1064 aa12.8□□□□□ -0.36
RIMKLA-202ENST00000431473 RAPH1Q70E73 1250 aa12.8□□□□□ -0.36
RIMKLA-202ENST00000431473 OTUD6AQ7L8S5 288 aa12.8□□□□□ -0.36
RIMKLA-202ENST00000431473 TM6SF1Q9BZW5 370 aa12.8□□□□□ -0.36
RIMKLA-202ENST00000431473 PER1O15534 1290 aaPredicted RBP12.8□□□□□ -0.36
RIMKLA-202ENST00000431473 PFKFB2O60825 505 aa12.8□□□□□ -0.36
RIMKLA-202ENST00000431473 A1BGP04217 495 aa12.8□□□□□ -0.36
RIMKLA-202ENST00000431473 TMED1Q13445 227 aa12.8□□□□□ -0.36
RIMKLA-202ENST00000431473 ABTB1Q969K4 478 aaPredicted RBP12.8□□□□□ -0.36
RIMKLA-202ENST00000431473 HAUS4Q9H6D7 363 aa12.8□□□□□ -0.36
RIMKLA-202ENST00000431473 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.8□□□□□ -0.36
RIMKLA-202ENST00000431473 ANKFY1Q9P2R3 1169 aa12.8□□□□□ -0.36
RIMKLA-202ENST00000431473 ZNF148Q9UQR1 794 aa12.8□□□□□ -0.36
RIMKLA-202ENST00000431473 DMP1Q13316 513 aaPredicted RBP12.8□□□□□ -0.36
RIMKLA-202ENST00000431473 ADAM9Q13443 819 aa12.8□□□□□ -0.36
RIMKLA-202ENST00000431473 NME8Q8N427 588 aa12.8□□□□□ -0.36
RIMKLA-202ENST00000431473 HAUS1Q96CS2 278 aa12.8□□□□□ -0.36
RIMKLA-202ENST00000431473 PSTPIP2Q9H939 334 aa12.8□□□□□ -0.36
RIMKLA-202ENST00000431473 C1orf112Q9NSG2 853 aa12.8□□□□□ -0.36
RIMKLA-202ENST00000431473 CDC23Q9UJX2 597 aa12.8□□□□□ -0.36
RIMKLA-202ENST00000431473 SH3TC1Q8TE82 1336 aa12.8□□□□□ -0.36
RIMKLA-202ENST00000431473 SYNJ2BP-COX16A0A087WUM0 186 aa12.8□□□□□ -0.36
RIMKLA-202ENST00000431473 NEURL1BA8MQ27 555 aa12.8□□□□□ -0.36
RIMKLA-202ENST00000431473 HSPD1P10809 573 aaKnown RBP12.8□□□□□ -0.36
RIMKLA-202ENST00000431473 ATP5JP18859 108 aa12.8□□□□□ -0.36
RIMKLA-202ENST00000431473 ANLNQ9NQW6 1124 aa12.8□□□□□ -0.36
RIMKLA-202ENST00000431473 COX16Q9P0S2 106 aa12.8□□□□□ -0.36
RIMKLA-202ENST00000431473 EPS15L1Q9UBC2 864 aa12.8□□□□□ -0.36
RIMKLA-202ENST00000431473 NOD1Q9Y239 953 aa12.8□□□□□ -0.36
RIMKLA-202ENST00000431473 FAM135BQ49AJ0 1406 aa12.8□□□□□ -0.36
RIMKLA-202ENST00000431473 EDC4Q6P2E9 1401 aaKnown RBP12.8□□□□□ -0.36
RIMKLA-202ENST00000431473 PHEXP78562 749 aa12.8□□□□□ -0.36
RIMKLA-202ENST00000431473 MESDQ14696 234 aa12.8□□□□□ -0.36
RIMKLA-202ENST00000431473 PRPF31Q8WWY3 499 aaKnown RBP12.8□□□□□ -0.36
RIMKLA-202ENST00000431473 TUBGCP2Q9BSJ2 902 aa12.8□□□□□ -0.36
RIMKLA-202ENST00000431473 IFT122Q9HBG6 1241 aa12.8□□□□□ -0.36
RIMKLA-202ENST00000431473 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.8□□□□□ -0.36
RIMKLA-202ENST00000431473 TESPA1A2RU30 521 aaPredicted RBP12.79□□□□□ -0.36
RIMKLA-202ENST00000431473 BTBD18B2RXH4 712 aa12.79□□□□□ -0.36
RIMKLA-202ENST00000431473 SART1O43290 800 aaKnown RBP12.79□□□□□ -0.36
RIMKLA-202ENST00000431473 APOEP02649 317 aa12.79□□□□□ -0.36
RIMKLA-202ENST00000431473 SLC52A2Q9HAB3 445 aa12.79□□□□□ -0.36
RIMKLA-202ENST00000431473 MAGED2Q9UNF1 606 aaPredicted RBP12.79□□□□□ -0.36
RIMKLA-202ENST00000431473 CD2APQ9Y5K6 639 aa12.79□□□□□ -0.36
RIMKLA-202ENST00000431473 DKC1O60832 514 aaKnown RBP eCLIP12.79□□□□□ -0.36
RIMKLA-202ENST00000431473 INHBAP08476 426 aa12.79□□□□□ -0.36
RIMKLA-202ENST00000431473 SLCO1A2P46721 670 aa12.79□□□□□ -0.36
RIMKLA-202ENST00000431473 INPP1P49441 399 aa12.79□□□□□ -0.36
RIMKLA-202ENST00000431473 TMTC3Q6ZXV5 915 aa12.79□□□□□ -0.36
RIMKLA-202ENST00000431473 ZNF518AQ6AHZ1 1483 aa12.79□□□□□ -0.36
RIMKLA-202ENST00000431473 PSDA5PKW4 1024 aaPredicted RBP12.79□□□□□ -0.36
RIMKLA-202ENST00000431473 CD2BP2O95400 341 aaKnown RBP12.79□□□□□ -0.36
RIMKLA-202ENST00000431473 TMED2Q15363 201 aa12.79□□□□□ -0.36
RIMKLA-202ENST00000431473 FAM178BQ8IXR5 827 aa12.79□□□□□ -0.36
RIMKLA-202ENST00000431473 GOLGA8HP0CJ92 632 aa12.79□□□□□ -0.36
RIMKLA-202ENST00000431473 ARHGEF16Q5VV41 709 aa12.79□□□□□ -0.36
RIMKLA-202ENST00000431473 TRIML1Q8N9V2 468 aa12.79□□□□□ -0.36
RIMKLA-202ENST00000431473 TRIM56Q9BRZ2 755 aaKnown RBP12.79□□□□□ -0.36
RIMKLA-202ENST00000431473 CHL1O00533 1208 aa12.79□□□□□ -0.36
RIMKLA-202ENST00000431473 CTNND1O60716 968 aaKnown RBP12.79□□□□□ -0.36
RIMKLA-202ENST00000431473 LIG4P49917 911 aa12.79□□□□□ -0.36
RIMKLA-202ENST00000431473 YWHAGP61981 247 aaKnown RBP eCLIP12.79□□□□□ -0.36
RIMKLA-202ENST00000431473 IFRD2Q12894 506 aaPredicted RBP12.79□□□□□ -0.36
RIMKLA-202ENST00000431473 GRAMD1CQ8IYS0 662 aa12.79□□□□□ -0.36
RIMKLA-202ENST00000431473 CAPN9O14815 690 aa12.79□□□□□ -0.36
RIMKLA-202ENST00000431473 TRPA1O75762 1119 aa12.79□□□□□ -0.36
RIMKLA-202ENST00000431473 BFSP1Q12934 665 aa12.79□□□□□ -0.36
RIMKLA-202ENST00000431473 EXOC3L4Q17RC7 722 aa12.79□□□□□ -0.36
RIMKLA-202ENST00000431473 LRRC47Q8N1G4 583 aaKnown RBP12.79□□□□□ -0.36
RIMKLA-202ENST00000431473 SKA2Q8WVK7 121 aaPredicted RBP12.79□□□□□ -0.36
RIMKLA-202ENST00000431473 CCDC127Q96BQ5 260 aa12.79□□□□□ -0.36
RIMKLA-202ENST00000431473 GPHNQ9NQX3 736 aaPredicted RBP12.79□□□□□ -0.36
RIMKLA-202ENST00000431473 KIAA0556O60303 1618 aa12.79□□□□□ -0.36
RIMKLA-202ENST00000431473 OR52Z1P0C646 297 aa12.79□□□□□ -0.36
RIMKLA-202ENST00000431473 ACRBPQ8NEB7 543 aa12.79□□□□□ -0.36
RIMKLA-202ENST00000431473 HDAC11Q96DB2 347 aa12.79□□□□□ -0.36
RIMKLA-202ENST00000431473 LARSQ9P2J5 1176 aaKnown RBP12.79□□□□□ -0.36
RIMKLA-202ENST00000431473 SH3BGRP55822 239 aaPredicted RBP12.78□□□□□ -0.36
RIMKLA-202ENST00000431473 LRRN2O75325 713 aa12.78□□□□□ -0.36
RIMKLA-202ENST00000431473 MOCS3O95396 460 aa12.78□□□□□ -0.36
RIMKLA-202ENST00000431473 SPDYE16A6NNV3 312 aaPredicted RBP12.78□□□□□ -0.36
RIMKLA-202ENST00000431473 FGAP02671 866 aa12.78□□□□□ -0.36
RIMKLA-202ENST00000431473 TMOD1P28289 359 aa12.78□□□□□ -0.36
RIMKLA-202ENST00000431473 CLCN6P51797 869 aa12.78□□□□□ -0.36
RIMKLA-202ENST00000431473 EPHB4P54760 987 aa12.78□□□□□ -0.36
RIMKLA-202ENST00000431473 PLCB4Q15147 1175 aa12.78□□□□□ -0.36
RIMKLA-202ENST00000431473 ADCK5Q3MIX3 580 aa12.78□□□□□ -0.36
RIMKLA-202ENST00000431473 SPDYE2Q495Y8 402 aa12.78□□□□□ -0.36
RIMKLA-202ENST00000431473 C4orf50Q6ZRC1 276 aa12.78□□□□□ -0.36
RIMKLA-202ENST00000431473 SLFN12Q8IYM2 578 aa12.78□□□□□ -0.36
RIMKLA-202ENST00000431473 GTPBP6O43824 516 aaPredicted RBP12.78□□□□□ -0.36
RIMKLA-202ENST00000431473 RINT1Q6NUQ1 792 aa12.78□□□□□ -0.36
RIMKLA-202ENST00000431473 NSMFQ6X4W1 530 aa12.78□□□□□ -0.36
RIMKLA-202ENST00000431473 MAGOHBQ96A72 148 aaKnown RBP12.78□□□□□ -0.36
RIMKLA-202ENST00000431473 HADHQ16836 314 aaKnown RBP12.78□□□□□ -0.36
RIMKLA-202ENST00000431473 TMTC4Q5T4D3 741 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 255.4 ms