RNA–Protein interactions for RNA: ENST00000427497.3

AC055811.2-201, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AC055811.2, Length 1,693 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055811.2-201ENST00000427497 CNKSR2Q8WXI2 1034 aa20.53■□□□□ 0.88
AC055811.2-201ENST00000427497 MRPS27Q92552 414 aaKnown RBP20.53■□□□□ 0.88
AC055811.2-201ENST00000427497 TESPA1A2RU30 521 aaPredicted RBP20.52■□□□□ 0.88
AC055811.2-201ENST00000427497 USP17L10C9JJH3 530 aa20.52■□□□□ 0.88
AC055811.2-201ENST00000427497 ZBTB5O15062 677 aa20.52■□□□□ 0.88
AC055811.2-201ENST00000427497 SNW1Q13573 536 aaKnown RBP20.52■□□□□ 0.88
AC055811.2-201ENST00000427497 PPP1R18Q6NYC8 613 aa20.52■□□□□ 0.88
AC055811.2-201ENST00000427497 BTNL9Q6UXG8 535 aa20.52■□□□□ 0.88
AC055811.2-201ENST00000427497 PIK3AP1Q6ZUJ8 805 aa20.52■□□□□ 0.88
AC055811.2-201ENST00000427497 FSIP1Q8NA03 581 aa20.52■□□□□ 0.88
AC055811.2-201ENST00000427497 PCDHA6Q9UN73 950 aa20.52■□□□□ 0.88
AC055811.2-201ENST00000427497 CEP131Q9UPN4 1083 aa20.52■□□□□ 0.88
AC055811.2-201ENST00000427497 PCDHA8Q9Y5H6 950 aa20.52■□□□□ 0.88
AC055811.2-201ENST00000427497 SMCO2A6NFE2 343 aa20.51■□□□□ 0.87
AC055811.2-201ENST00000427497 RAD21O60216 631 aa20.51■□□□□ 0.87
AC055811.2-201ENST00000427497 PPP1R11O60927 126 aaPredicted RBP20.51■□□□□ 0.87
AC055811.2-201ENST00000427497 BMP3P12645 472 aa20.51■□□□□ 0.87
AC055811.2-201ENST00000427497 CMA1P23946 247 aa20.51■□□□□ 0.87
AC055811.2-201ENST00000427497 GNA11P29992 359 aa20.51■□□□□ 0.87
AC055811.2-201ENST00000427497 FAM160A1Q05DH4 1040 aa20.51■□□□□ 0.87
AC055811.2-201ENST00000427497 DCAF15Q66K64 600 aa20.51■□□□□ 0.87
AC055811.2-201ENST00000427497 CCDC73Q6ZRK6 1079 aa20.51■□□□□ 0.87
AC055811.2-201ENST00000427497 MS4A4AQ96JQ5 239 aa20.51■□□□□ 0.87
AC055811.2-201ENST00000427497 WRNIP1Q96S55 665 aa20.51■□□□□ 0.87
AC055811.2-201ENST00000427497 NUP62CLQ9H1M0 184 aa20.51■□□□□ 0.87
AC055811.2-201ENST00000427497 CLSTN2Q9H4D0 955 aa20.51■□□□□ 0.87
AC055811.2-201ENST00000427497 GOPCQ9HD26 462 aa20.51■□□□□ 0.87
AC055811.2-201ENST00000427497 C6orf50Q9HD87 102 aa20.51■□□□□ 0.87
AC055811.2-201ENST00000427497 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.51■□□□□ 0.87
AC055811.2-201ENST00000427497 WNT7AO00755 349 aa20.51■□□□□ 0.87
AC055811.2-201ENST00000427497 CTNND1O60716 968 aaKnown RBP20.51■□□□□ 0.87
AC055811.2-201ENST00000427497 CUTAO60888 179 aa20.51■□□□□ 0.87
AC055811.2-201ENST00000427497 FKTNO75072 461 aa20.51■□□□□ 0.87
AC055811.2-201ENST00000427497 BMP15O95972 392 aa20.51■□□□□ 0.87
AC055811.2-201ENST00000427497 KIAA1755Q5JYT7 1200 aa20.51■□□□□ 0.87
AC055811.2-201ENST00000427497 NUP88Q99567 741 aaPredicted RBP20.51■□□□□ 0.87
AC055811.2-201ENST00000427497 PTPN18Q99952 460 aa20.51■□□□□ 0.87
AC055811.2-201ENST00000427497 SH2D4AQ9H788 454 aa20.51■□□□□ 0.87
AC055811.2-201ENST00000427497 PTPREP23469 700 aa20.5■□□□□ 0.87
AC055811.2-201ENST00000427497 TTC38Q5R3I4 469 aa20.5■□□□□ 0.87
AC055811.2-201ENST00000427497 FMR1NBQ8N0W7 255 aaPredicted RBP20.5■□□□□ 0.87
AC055811.2-201ENST00000427497 KRI1Q8N9T8 703 aaKnown RBP20.5■□□□□ 0.87
AC055811.2-201ENST00000427497 RASGRP4Q8TDF6 673 aa20.5■□□□□ 0.87
AC055811.2-201ENST00000427497 ZKSCAN4Q969J2 545 aaPredicted RBP20.5■□□□□ 0.87
AC055811.2-201ENST00000427497 COA7Q96BR5 231 aa20.5■□□□□ 0.87
AC055811.2-201ENST00000427497 OTUD5Q96G74 571 aa20.5■□□□□ 0.87
AC055811.2-201ENST00000427497 VCPKMTQ9H867 229 aa20.5■□□□□ 0.87
AC055811.2-201ENST00000427497 ZNF112Q9UJU3 913 aa20.5■□□□□ 0.87
AC055811.2-201ENST00000427497 FBXO2Q9UK22 296 aaPredicted RBP20.5■□□□□ 0.87
AC055811.2-201ENST00000427497 SNCAIPQ9Y6H5 919 aa20.5■□□□□ 0.87
AC055811.2-201ENST00000427497 DOCK1Q14185 1865 aa20.49■□□□□ 0.87
AC055811.2-201ENST00000427497 FAM237AA0A1B0GTK4 181 aa20.49■□□□□ 0.87
AC055811.2-201ENST00000427497 SPDYE5A6NIY4 337 aa20.49■□□□□ 0.87
AC055811.2-201ENST00000427497 ATP2B1P20020 1258 aa20.49■□□□□ 0.87
AC055811.2-201ENST00000427497 PKN2Q16513 984 aaKnown RBP20.49■□□□□ 0.87
AC055811.2-201ENST00000427497 RBM43Q6ZSC3 357 aaKnown RBP20.49■□□□□ 0.87
AC055811.2-201ENST00000427497 ZNF341Q9BYN7 854 aa20.49■□□□□ 0.87
AC055811.2-201ENST00000427497 CCDC194A0A1B0GVG4 234 aa20.48■□□□□ 0.87
AC055811.2-201ENST00000427497 TMEM232C9JQI7 657 aa20.48■□□□□ 0.87
AC055811.2-201ENST00000427497 GTF2A2P52657 109 aa20.48■□□□□ 0.87
AC055811.2-201ENST00000427497 QRICH1Q2TAL8 776 aa20.48■□□□□ 0.87
AC055811.2-201ENST00000427497 L1TD1Q5T7N2 865 aaKnown RBP20.48■□□□□ 0.87
AC055811.2-201ENST00000427497 SYDE2Q5VT97 1194 aa20.48■□□□□ 0.87
AC055811.2-201ENST00000427497 SHC4Q6S5L8 630 aa20.48■□□□□ 0.87
AC055811.2-201ENST00000427497 KRT25Q7Z3Z0 450 aa20.48■□□□□ 0.87
AC055811.2-201ENST00000427497 SRPRBQ9Y5M8 271 aaKnown RBP20.48■□□□□ 0.87
AC055811.2-201ENST00000427497 A0A1B0GVL5 298 aa20.48■□□□□ 0.87
AC055811.2-201ENST00000427497 RGS19P49795 217 aa20.48■□□□□ 0.87
AC055811.2-201ENST00000427497 NDUFA8P51970 172 aa20.48■□□□□ 0.87
AC055811.2-201ENST00000427497 CRHR2Q13324 411 aa20.48■□□□□ 0.87
AC055811.2-201ENST00000427497 CDC37Q16543 378 aaPredicted RBP20.48■□□□□ 0.87
AC055811.2-201ENST00000427497 RESP18Q5W5W9 173 aa20.48■□□□□ 0.87
AC055811.2-201ENST00000427497 ERO1BQ86YB8 467 aa20.48■□□□□ 0.87
AC055811.2-201ENST00000427497 SPICE1Q8N0Z3 855 aa20.48■□□□□ 0.87
AC055811.2-201ENST00000427497 BRI3BPQ8WY22 251 aa20.48■□□□□ 0.87
AC055811.2-201ENST00000427497 PLA2G6O60733 806 aa20.47■□□□□ 0.87
AC055811.2-201ENST00000427497 MRE11P49959 708 aa20.47■□□□□ 0.87
AC055811.2-201ENST00000427497 ZNF579Q8NAF0 562 aaKnown RBP20.47■□□□□ 0.87
AC055811.2-201ENST00000427497 CLIC6Q96NY7 704 aa20.47■□□□□ 0.87
AC055811.2-201ENST00000427497 FUCA2Q9BTY2 467 aa20.47■□□□□ 0.87
AC055811.2-201ENST00000427497 TNMDQ9H2S6 317 aa20.47■□□□□ 0.87
AC055811.2-201ENST00000427497 GRPEL1Q9HAV7 217 aa20.47■□□□□ 0.87
AC055811.2-201ENST00000427497 RIC8AQ9NPQ8 531 aa20.47■□□□□ 0.87
AC055811.2-201ENST00000427497 HPSEQ9Y251 543 aa20.47■□□□□ 0.87
AC055811.2-201ENST00000427497 CCL15-CCL14A0A0B4J2E2 113 aa20.46■□□□□ 0.87
AC055811.2-201ENST00000427497 PFKFB1P16118 471 aa20.46■□□□□ 0.87
AC055811.2-201ENST00000427497 INPP5BP32019 993 aa20.46■□□□□ 0.87
AC055811.2-201ENST00000427497 ADCY7P51828 1080 aa20.46■□□□□ 0.87
AC055811.2-201ENST00000427497 ATP2C1P98194 919 aaPredicted RBP20.46■□□□□ 0.87
AC055811.2-201ENST00000427497 ZNF174Q15697 407 aa20.46■□□□□ 0.87
AC055811.2-201ENST00000427497 CCL15Q16663 113 aa20.46■□□□□ 0.87
AC055811.2-201ENST00000427497 CCDC84Q86UT8 332 aaPredicted RBP20.46■□□□□ 0.87
AC055811.2-201ENST00000427497 REXO1Q8N1G1 1221 aaKnown RBP20.46■□□□□ 0.87
AC055811.2-201ENST00000427497 KINO60870 393 aaKnown RBP20.45■□□□□ 0.86
AC055811.2-201ENST00000427497 STAT2P52630 851 aa20.45■□□□□ 0.86
AC055811.2-201ENST00000427497 CAMK4Q16566 473 aa20.45■□□□□ 0.86
AC055811.2-201ENST00000427497 FAM83BQ5T0W9 1011 aa20.45■□□□□ 0.86
AC055811.2-201ENST00000427497 TSPY26PQ9H489 355 aa20.45■□□□□ 0.86
AC055811.2-201ENST00000427497 GRIN1Q05586 938 aa20.45■□□□□ 0.86
AC055811.2-201ENST00000427497 NONOQ15233 471 aaKnown RBP eCLIP20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms