RNA–Protein interactions for RNA: ENST00000424234.6

ACTN4-203, Transcript of actinin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ACTN4, Length 1,566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-203ENST00000424234 PDHXO00330 501 aa16.15■□□□□ 0.18
ACTN4-203ENST00000424234 VEGFBP49765 207 aa16.15■□□□□ 0.18
ACTN4-203ENST00000424234 IRX3P78415 501 aaPredicted RBP16.15■□□□□ 0.18
ACTN4-203ENST00000424234 SREBF2Q12772 1141 aa16.15■□□□□ 0.18
ACTN4-203ENST00000424234 PABPC4Q13310 644 aaKnown RBP eCLIP16.15■□□□□ 0.185e-24■■□□□ 14.4
ACTN4-203ENST00000424234 SAMD1Q6SPF0 538 aaPredicted RBP16.15■□□□□ 0.18
ACTN4-203ENST00000424234 ATG4CQ96DT6 458 aa16.15■□□□□ 0.18
ACTN4-203ENST00000424234 RNF26Q9BY78 433 aaPredicted RBP16.15■□□□□ 0.18
ACTN4-203ENST00000424234 JMJD4Q9H9V9 463 aa16.15■□□□□ 0.18
ACTN4-203ENST00000424234 PCNTO95613 3336 aa16.14■□□□□ 0.18
ACTN4-203ENST00000424234 hCG_1642624A0A1W2PR95 340 aa16.14■□□□□ 0.17
ACTN4-203ENST00000424234 FMNL1O95466 1100 aaPredicted RBP16.14■□□□□ 0.17
ACTN4-203ENST00000424234 FDPSP14324 419 aaKnown RBP16.14■□□□□ 0.17
ACTN4-203ENST00000424234 DSG3P32926 999 aa16.14■□□□□ 0.17
ACTN4-203ENST00000424234 KIF23Q02241 960 aaPredicted RBP16.14■□□□□ 0.17
ACTN4-203ENST00000424234 TYRO3Q06418 890 aa16.14■□□□□ 0.17
ACTN4-203ENST00000424234 COG2Q14746 738 aa16.14■□□□□ 0.17
ACTN4-203ENST00000424234 CDC37Q16543 378 aaPredicted RBP16.14■□□□□ 0.17
ACTN4-203ENST00000424234 HOMER1Q86YM7 354 aa16.14■□□□□ 0.17
ACTN4-203ENST00000424234 PRPF38AQ8NAV1 312 aaKnown RBP16.14■□□□□ 0.17
ACTN4-203ENST00000424234 SLC26A6Q9BXS9 759 aa16.14■□□□□ 0.17
ACTN4-203ENST00000424234 RANBP17Q9H2T7 1088 aaKnown RBP16.14■□□□□ 0.17
ACTN4-203ENST00000424234 ZCCHC17Q9NP64 241 aaKnown RBP16.14■□□□□ 0.17
ACTN4-203ENST00000424234 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.14■□□□□ 0.17
ACTN4-203ENST00000424234 USP25Q9UHP3 1055 aa16.14■□□□□ 0.17
ACTN4-203ENST00000424234 PNMA3Q9UL41 463 aa16.14■□□□□ 0.17
ACTN4-203ENST00000424234 ADCY5O95622 1261 aa16.13■□□□□ 0.17
ACTN4-203ENST00000424234 FOSBP53539 338 aa16.13■□□□□ 0.17
ACTN4-203ENST00000424234 INHBEP58166 350 aa16.13■□□□□ 0.17
ACTN4-203ENST00000424234 POTEEQ6S8J3 1075 aa16.13■□□□□ 0.17
ACTN4-203ENST00000424234 IFNL1Q8IU54 200 aa16.13■□□□□ 0.17
ACTN4-203ENST00000424234 FAM200AQ8TCP9 573 aa16.13■□□□□ 0.17
ACTN4-203ENST00000424234 PIBF1Q8WXW3 757 aa16.13■□□□□ 0.17
ACTN4-203ENST00000424234 C8orf76Q96K31 380 aa16.13■□□□□ 0.17
ACTN4-203ENST00000424234 PIGSQ96S52 555 aa16.13■□□□□ 0.17
ACTN4-203ENST00000424234 VAT1LQ9HCJ6 419 aa16.13■□□□□ 0.17
ACTN4-203ENST00000424234 ADAMTS5Q9UNA0 930 aa16.13■□□□□ 0.17
ACTN4-203ENST00000424234 ZNF236Q9UL36 1845 aa16.13■□□□□ 0.17
ACTN4-203ENST00000424234 KIAA1217Q5T5P2 1943 aa16.13■□□□□ 0.17
ACTN4-203ENST00000424234 VWA5AO00534 786 aa16.13■□□□□ 0.17
ACTN4-203ENST00000424234 CTAGE5O15320 804 aa16.13■□□□□ 0.17
ACTN4-203ENST00000424234 PRPF3O43395 683 aaKnown RBP16.13■□□□□ 0.17
ACTN4-203ENST00000424234 NR1I2O75469 434 aa16.13■□□□□ 0.17
ACTN4-203ENST00000424234 CYP2C8P10632 490 aa16.13■□□□□ 0.17
ACTN4-203ENST00000424234 OSBPP22059 807 aa16.13■□□□□ 0.17
ACTN4-203ENST00000424234 TM4SF4P48230 202 aa16.13■□□□□ 0.17
ACTN4-203ENST00000424234 SNAP25P60880 206 aa16.13■□□□□ 0.17
ACTN4-203ENST00000424234 HERVK_113P62684 666 aa16.13■□□□□ 0.17
ACTN4-203ENST00000424234 SSRP1Q08945 709 aaKnown RBP16.13■□□□□ 0.17
ACTN4-203ENST00000424234 QRICH1Q2TAL8 776 aa16.13■□□□□ 0.17
ACTN4-203ENST00000424234 LBX2Q6XYB7 198 aa16.13■□□□□ 0.17
ACTN4-203ENST00000424234 TRIM22Q8IYM9 498 aa16.13■□□□□ 0.17
ACTN4-203ENST00000424234 REPS2Q8NFH8 660 aa16.13■□□□□ 0.17
ACTN4-203ENST00000424234 RRP36Q96EU6 259 aaKnown RBP16.13■□□□□ 0.17
ACTN4-203ENST00000424234 P2RX7Q99572 595 aaKnown RBP16.13■□□□□ 0.17
ACTN4-203ENST00000424234 SLC38A10Q9HBR0 1119 aa16.13■□□□□ 0.17
ACTN4-203ENST00000424234 ORC3Q9UBD5 711 aaPredicted RBP16.13■□□□□ 0.17
ACTN4-203ENST00000424234 LRRC37A2A6NM11 1700 aa16.13■□□□□ 0.17
ACTN4-203ENST00000424234 ZBTB5O15062 677 aa16.12■□□□□ 0.17
ACTN4-203ENST00000424234 PPP1R11O60927 126 aaPredicted RBP16.12■□□□□ 0.17
ACTN4-203ENST00000424234 PKN1Q16512 942 aa16.12■□□□□ 0.17
ACTN4-203ENST00000424234 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.12■□□□□ 0.17
ACTN4-203ENST00000424234 BRAPQ7Z569 592 aa16.12■□□□□ 0.17
ACTN4-203ENST00000424234 NAP1L5Q96NT1 182 aaPredicted RBP16.12■□□□□ 0.17
ACTN4-203ENST00000424234 USP28Q96RU2 1077 aa16.12■□□□□ 0.17
ACTN4-203ENST00000424234 PARK7Q99497 189 aaKnown RBP16.12■□□□□ 0.17
ACTN4-203ENST00000424234 SEC63Q9UGP8 760 aaKnown RBP16.12■□□□□ 0.17
ACTN4-203ENST00000424234 MRVI1Q9Y6F6 885 aa16.12■□□□□ 0.17
ACTN4-203ENST00000424234 V9GY48 417 aaPredicted RBP16.12■□□□□ 0.17
ACTN4-203ENST00000424234 ZNF536O15090 1300 aa16.12■□□□□ 0.17
ACTN4-203ENST00000424234 ADGRA2Q96PE1 1338 aa16.12■□□□□ 0.17
ACTN4-203ENST00000424234 CASP8AP2Q9UKL3 1982 aa16.11■□□□□ 0.17
ACTN4-203ENST00000424234 OFD1O75665 1012 aa16.11■□□□□ 0.17
ACTN4-203ENST00000424234 DEXIO95424 95 aa16.11■□□□□ 0.17
ACTN4-203ENST00000424234 CAVIN2O95810 425 aa16.11■□□□□ 0.17
ACTN4-203ENST00000424234 TAL1P17542 331 aaPredicted RBP16.11■□□□□ 0.17
ACTN4-203ENST00000424234 CAMK4Q16566 473 aa16.11■□□□□ 0.17
ACTN4-203ENST00000424234 SASS6Q6UVJ0 657 aa16.11■□□□□ 0.17
ACTN4-203ENST00000424234 FBXO18Q8NFZ0 1043 aa16.11■□□□□ 0.17
ACTN4-203ENST00000424234 AIFM3Q96NN9 605 aa16.11■□□□□ 0.17
ACTN4-203ENST00000424234 HOXC10Q9NYD6 342 aa16.11■□□□□ 0.17
ACTN4-203ENST00000424234 RTEL1Q9NZ71 1219 aa16.11■□□□□ 0.17
ACTN4-203ENST00000424234 CEP350Q5VT06 3117 aa16.1■□□□□ 0.17
ACTN4-203ENST00000424234 PNMA6FA0A0J9YX94 578 aa16.1■□□□□ 0.17
ACTN4-203ENST00000424234 FDX1P10109 184 aa16.1■□□□□ 0.17
ACTN4-203ENST00000424234 SCG2P13521 617 aa16.1■□□□□ 0.17
ACTN4-203ENST00000424234 MAP2K2P36507 400 aa16.1■□□□□ 0.17
ACTN4-203ENST00000424234 AKAP17AQ02040 695 aaKnown RBP16.1■□□□□ 0.17
ACTN4-203ENST00000424234 GUCY1B3Q02153 619 aa16.1■□□□□ 0.17
ACTN4-203ENST00000424234 PFKFB3Q16875 520 aaPredicted RBP16.1■□□□□ 0.17
ACTN4-203ENST00000424234 CCDC174Q6PII3 467 aa16.1■□□□□ 0.17
ACTN4-203ENST00000424234 CCDC73Q6ZRK6 1079 aa16.1■□□□□ 0.17
ACTN4-203ENST00000424234 CCAR1Q8IX12 1150 aaKnown RBP16.1■□□□□ 0.17
ACTN4-203ENST00000424234 SMCR8Q8TEV9 937 aaPredicted RBP16.1■□□□□ 0.17
ACTN4-203ENST00000424234 GPKOWQ92917 476 aaPredicted RBP eCLIP16.1■□□□□ 0.17
ACTN4-203ENST00000424234 ZNF214Q9UL59 606 aaPredicted RBP16.1■□□□□ 0.17
ACTN4-203ENST00000424234 PEX10O60683 326 aa16.09■□□□□ 0.17
ACTN4-203ENST00000424234 CNMDO75829 334 aa16.09■□□□□ 0.17
ACTN4-203ENST00000424234 CEBPZQ03701 1054 aaKnown RBP16.09■□□□□ 0.17
ACTN4-203ENST00000424234 TMEM132BQ14DG7 1078 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms