RNA–Protein interactions for RNA: ENST00000421263.1

VARS2-202, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 460 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-202ENST00000421263 PQBP1O60828 265 aaKnown RBP22.3■■□□□ 1.16
VARS2-202ENST00000421263 ASGR1P07306 291 aa22.3■■□□□ 1.16
VARS2-202ENST00000421263 RRP12Q5JTH9 1297 aaKnown RBP22.3■■□□□ 1.16
VARS2-202ENST00000421263 AKNAD1Q5T1N1 836 aa22.3■■□□□ 1.16
VARS2-202ENST00000421263 GLT1D1Q96MS3 346 aa22.3■■□□□ 1.16
VARS2-202ENST00000421263 SPC25Q9HBM1 224 aa22.3■■□□□ 1.16
VARS2-202ENST00000421263 DCDC2CA8MYV0 355 aa22.29■■□□□ 1.16
VARS2-202ENST00000421263 SLC16A2P36021 539 aa22.29■■□□□ 1.16
VARS2-202ENST00000421263 HAND2P61296 217 aa22.29■■□□□ 1.16
VARS2-202ENST00000421263 MFSD6Q6ZSS7 791 aa22.29■■□□□ 1.16
VARS2-202ENST00000421263 SLC17A8Q8NDX2 589 aa22.29■■□□□ 1.16
VARS2-202ENST00000421263 EXOC6Q8TAG9 804 aa22.29■■□□□ 1.16
VARS2-202ENST00000421263 MORC4Q8TE76 937 aa22.29■■□□□ 1.16
VARS2-202ENST00000421263 TMEM39AQ9NV64 488 aa22.29■■□□□ 1.16
VARS2-202ENST00000421263 CCPG1Q9ULG6 757 aa22.29■■□□□ 1.16
VARS2-202ENST00000421263 MTMR7Q9Y216 660 aa22.29■■□□□ 1.16
VARS2-202ENST00000421263 GNEQ9Y223 722 aaKnown RBP22.29■■□□□ 1.16
VARS2-202ENST00000421263 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.28■■□□□ 1.16
VARS2-202ENST00000421263 RAG1P15918 1043 aa22.28■■□□□ 1.16
VARS2-202ENST00000421263 MFAP1P55081 439 aaKnown RBP22.28■■□□□ 1.16
VARS2-202ENST00000421263 TNFAIP2Q03169 654 aa22.28■■□□□ 1.16
VARS2-202ENST00000421263 CCDC96Q2M329 555 aa22.28■■□□□ 1.16
VARS2-202ENST00000421263 GNASQ5JWF2 1037 aa22.28■■□□□ 1.16
VARS2-202ENST00000421263 SYDE2Q5VT97 1194 aa22.28■■□□□ 1.16
VARS2-202ENST00000421263 TBC1D10CQ8IV04 446 aa22.28■■□□□ 1.16
VARS2-202ENST00000421263 YTHDC1Q96MU7 727 aaKnown RBP22.28■■□□□ 1.16
VARS2-202ENST00000421263 SNHG28P0DPA3 235 aa22.27■■□□□ 1.16
VARS2-202ENST00000421263 PDHBP11177 359 aa22.27■■□□□ 1.16
VARS2-202ENST00000421263 EPHB4P54760 987 aa22.27■■□□□ 1.16
VARS2-202ENST00000421263 TAPT1Q6NXT6 567 aa22.27■■□□□ 1.16
VARS2-202ENST00000421263 TBX21Q9UL17 535 aa22.27■■□□□ 1.16
VARS2-202ENST00000421263 ARVCFO00192 962 aa22.26■■□□□ 1.15
VARS2-202ENST00000421263 IQSEC1Q6DN90 963 aa22.26■■□□□ 1.15
VARS2-202ENST00000421263 GUCD1Q96NT3 240 aa22.26■■□□□ 1.15
VARS2-202ENST00000421263 RNF41Q9H4P4 317 aaPredicted RBP22.26■■□□□ 1.15
VARS2-202ENST00000421263 Q9Y3F1 56 aa22.26■■□□□ 1.15
VARS2-202ENST00000421263 DDX49Q9Y6V7 483 aaKnown RBP22.26■■□□□ 1.15
VARS2-202ENST00000421263 MROH7Q68CQ1 1323 aa22.26■■□□□ 1.15
VARS2-202ENST00000421263 TIMP1P01033 207 aa22.25■■□□□ 1.15
VARS2-202ENST00000421263 SMPD1P17405 629 aa22.25■■□□□ 1.15
VARS2-202ENST00000421263 NT5C2P49902 561 aa22.25■■□□□ 1.15
VARS2-202ENST00000421263 SMAD3P84022 425 aaKnown RBP22.25■■□□□ 1.15
VARS2-202ENST00000421263 ZNF543Q08ER8 600 aa22.25■■□□□ 1.15
VARS2-202ENST00000421263 NSMFQ6X4W1 530 aa22.25■■□□□ 1.15
VARS2-202ENST00000421263 PURBQ96QR8 312 aaKnown RBP22.25■■□□□ 1.15
VARS2-202ENST00000421263 GPCPD1Q9NPB8 672 aa22.25■■□□□ 1.15
VARS2-202ENST00000421263 PDGFCQ9NRA1 345 aa22.25■■□□□ 1.15
VARS2-202ENST00000421263 LCTP09848 1927 aa22.25■■□□□ 1.15
VARS2-202ENST00000421263 FRMPD2Q68DX3 1309 aaPredicted RBP22.25■■□□□ 1.15
VARS2-202ENST00000421263 LOC102724159A0A0B4J2E5 919 aa22.24■■□□□ 1.15
VARS2-202ENST00000421263 A0A0U1RQG5 324 aaPredicted RBP22.24■■□□□ 1.15
VARS2-202ENST00000421263 ZNF213O14771 459 aa22.24■■□□□ 1.15
VARS2-202ENST00000421263 BEX3Q00994 111 aa22.24■■□□□ 1.15
VARS2-202ENST00000421263 FPGSQ05932 587 aa22.24■■□□□ 1.15
VARS2-202ENST00000421263 BAATQ14032 418 aaPredicted RBP22.24■■□□□ 1.15
VARS2-202ENST00000421263 PWP2Q15269 919 aaKnown RBP22.24■■□□□ 1.15
VARS2-202ENST00000421263 DGKHQ86XP1 1220 aa22.24■■□□□ 1.15
VARS2-202ENST00000421263 SLC43A3Q8NBI5 491 aa22.24■■□□□ 1.15
VARS2-202ENST00000421263 CLEC4DQ8WXI8 215 aa22.24■■□□□ 1.15
VARS2-202ENST00000421263 ESR2Q92731 530 aa22.24■■□□□ 1.15
VARS2-202ENST00000421263 PNMA2Q9UL42 364 aa22.24■■□□□ 1.15
VARS2-202ENST00000421263 NFIBO00712 420 aa22.23■■□□□ 1.15
VARS2-202ENST00000421263 CWC27Q6UX04 472 aaKnown RBP22.23■■□□□ 1.15
VARS2-202ENST00000421263 TLK2Q86UE8 772 aa22.23■■□□□ 1.15
VARS2-202ENST00000421263 FAM126BQ8IXS8 530 aa22.23■■□□□ 1.15
VARS2-202ENST00000421263 ANKS1AQ92625 1134 aa22.23■■□□□ 1.15
VARS2-202ENST00000421263 VTI1AQ96AJ9 217 aa22.23■■□□□ 1.15
VARS2-202ENST00000421263 VTA1Q9NP79 307 aa22.23■■□□□ 1.15
VARS2-202ENST00000421263 A0A0C4DFX4 3053 aa22.23■■□□□ 1.15
VARS2-202ENST00000421263 NEDD4P46934 1319 aa22.23■■□□□ 1.15
VARS2-202ENST00000421263 LRRC37A2A6NM11 1700 aa22.23■■□□□ 1.15
VARS2-202ENST00000421263 HIP1O00291 1037 aa22.22■■□□□ 1.15
VARS2-202ENST00000421263 DYNC1LI2O43237 492 aaPredicted RBP22.22■■□□□ 1.15
VARS2-202ENST00000421263 CABYRO75952 493 aa22.22■■□□□ 1.15
VARS2-202ENST00000421263 CD4P01730 458 aa22.22■■□□□ 1.15
VARS2-202ENST00000421263 TMEM63BQ5T3F8 832 aa22.22■■□□□ 1.15
VARS2-202ENST00000421263 ZNF697Q5TEC3 545 aa22.22■■□□□ 1.15
VARS2-202ENST00000421263 MFSD5Q6N075 450 aa22.22■■□□□ 1.15
VARS2-202ENST00000421263 SEMA6BQ9H3T3 888 aa22.22■■□□□ 1.15
VARS2-202ENST00000421263 ADD3Q9UEY8 706 aaKnown RBP22.22■■□□□ 1.15
VARS2-202ENST00000421263 RBM47A0AV96 593 aaKnown RBP22.21■■□□□ 1.15
VARS2-202ENST00000421263 PTGS1P23219 599 aa22.21■■□□□ 1.15
VARS2-202ENST00000421263 ALDH5A1P51649 535 aaPredicted RBP22.21■■□□□ 1.15
VARS2-202ENST00000421263 FSCN1Q16658 493 aaKnown RBP22.21■■□□□ 1.15
VARS2-202ENST00000421263 NOL8Q76FK4 1167 aaKnown RBP22.21■■□□□ 1.15
VARS2-202ENST00000421263 EEPD1Q7L9B9 569 aa22.21■■□□□ 1.15
VARS2-202ENST00000421263 FBXO16Q8IX29 292 aaPredicted RBP22.21■■□□□ 1.15
VARS2-202ENST00000421263 DSCC1Q9BVC3 393 aa22.21■■□□□ 1.15
VARS2-202ENST00000421263 AP5M1Q9H0R1 490 aa22.21■■□□□ 1.15
VARS2-202ENST00000421263 WDR19Q8NEZ3 1342 aa22.21■■□□□ 1.15
VARS2-202ENST00000421263 CCDC178Q5BJE1 867 aa22.2■■□□□ 1.14
VARS2-202ENST00000421263 GPATCH4Q5T3I0 446 aaKnown RBP22.2■■□□□ 1.14
VARS2-202ENST00000421263 CXCL17Q6UXB2 119 aa22.2■■□□□ 1.14
VARS2-202ENST00000421263 KIAA1211Q6ZU35 1233 aa22.2■■□□□ 1.14
VARS2-202ENST00000421263 C16orf59Q7L2K0 433 aa22.2■■□□□ 1.14
VARS2-202ENST00000421263 RNPC3Q96LT9 517 aaKnown RBP22.2■■□□□ 1.14
VARS2-202ENST00000421263 FAM161BQ96MY7 647 aa22.2■■□□□ 1.14
VARS2-202ENST00000421263 ZKSCAN3Q9BRR0 538 aa22.2■■□□□ 1.14
VARS2-202ENST00000421263 SEZ6LQ9BYH1 1024 aa22.2■■□□□ 1.14
VARS2-202ENST00000421263 DIAPH3Q9NSV4 1193 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms