RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 ZC3H15Q8WU90 426 aaKnown RBP6.29□□□□□ -1.4
EPHA4-202ENST00000409854 CHURC1Q8WUH1 139 aa6.29□□□□□ -1.4
EPHA4-202ENST00000409854 C12orf42Q96LP6 360 aa6.29□□□□□ -1.4
EPHA4-202ENST00000409854 RBSNQ9H1K0 784 aa6.29□□□□□ -1.4
EPHA4-202ENST00000409854 OPLAHO14841 1288 aa6.29□□□□□ -1.4
EPHA4-202ENST00000409854 RAD21O60216 631 aa6.29□□□□□ -1.4
EPHA4-202ENST00000409854 ZNF202O95125 648 aa6.29□□□□□ -1.4
EPHA4-202ENST00000409854 XRCC6P12956 609 aaKnown RBP eCLIP6.29□□□□□ -1.4
EPHA4-202ENST00000409854 PTPRAP18433 802 aa6.29□□□□□ -1.4
EPHA4-202ENST00000409854 MRPL12P52815 198 aaKnown RBP6.29□□□□□ -1.4
EPHA4-202ENST00000409854 TRAF1Q13077 416 aa6.29□□□□□ -1.4
EPHA4-202ENST00000409854 MCTP2Q6DN12 878 aa6.29□□□□□ -1.4
EPHA4-202ENST00000409854 DPY19L2Q6NUT2 758 aa6.29□□□□□ -1.4
EPHA4-202ENST00000409854 NEK8Q86SG6 692 aa6.29□□□□□ -1.4
EPHA4-202ENST00000409854 CCDC84Q86UT8 332 aaPredicted RBP6.29□□□□□ -1.4
EPHA4-202ENST00000409854 FBXO11Q86XK2 927 aa6.29□□□□□ -1.4
EPHA4-202ENST00000409854 WRNIP1Q96S55 665 aa6.29□□□□□ -1.4
EPHA4-202ENST00000409854 CSRNP2Q9H175 543 aa6.29□□□□□ -1.4
EPHA4-202ENST00000409854 AS3MTQ9HBK9 375 aa6.29□□□□□ -1.4
EPHA4-202ENST00000409854 TMEM260Q9NX78 707 aa6.29□□□□□ -1.4
EPHA4-202ENST00000409854 PCDHA1Q9Y5I3 950 aa6.29□□□□□ -1.4
EPHA4-202ENST00000409854 MEIS2O14770 477 aa6.28□□□□□ -1.4
EPHA4-202ENST00000409854 ATP2B1P20020 1258 aa6.28□□□□□ -1.4
EPHA4-202ENST00000409854 SYKP43405 635 aa6.28□□□□□ -1.4
EPHA4-202ENST00000409854 USP14P54578 494 aa6.28□□□□□ -1.4
EPHA4-202ENST00000409854 AP3B2Q13367 1082 aa6.28□□□□□ -1.4
EPHA4-202ENST00000409854 IL17AQ16552 155 aa6.28□□□□□ -1.4
EPHA4-202ENST00000409854 CAMK4Q16566 473 aa6.28□□□□□ -1.4
EPHA4-202ENST00000409854 TBCKQ8TEA7 893 aa6.28□□□□□ -1.4
EPHA4-202ENST00000409854 CRYGNQ8WXF5 182 aa6.28□□□□□ -1.4
EPHA4-202ENST00000409854 PSTPIP2Q9H939 334 aa6.28□□□□□ -1.4
EPHA4-202ENST00000409854 BIN2Q9UBW5 565 aaPredicted RBP6.28□□□□□ -1.4
EPHA4-202ENST00000409854 PIK3CDO00329 1044 aa6.28□□□□□ -1.4
EPHA4-202ENST00000409854 USP2O75604 605 aaPredicted RBP6.28□□□□□ -1.4
EPHA4-202ENST00000409854 MCM7P33993 719 aa6.28□□□□□ -1.4
EPHA4-202ENST00000409854 PRAMEF18Q5VWM3 479 aa6.28□□□□□ -1.4
EPHA4-202ENST00000409854 DCPSQ96C86 337 aaKnown RBP6.28□□□□□ -1.4
EPHA4-202ENST00000409854 FEZ1Q99689 392 aa6.28□□□□□ -1.4
EPHA4-202ENST00000409854 EMILIN3Q9NT22 766 aa6.28□□□□□ -1.4
EPHA4-202ENST00000409854 KCNH3Q9ULD8 1083 aa6.28□□□□□ -1.4
EPHA4-202ENST00000409854 TRPM7Q96QT4 1865 aa6.27□□□□□ -1.4
EPHA4-202ENST00000409854 POTECB2RU33 542 aa6.27□□□□□ -1.41
EPHA4-202ENST00000409854 CCDC192P0DO97 292 aa6.27□□□□□ -1.41
EPHA4-202ENST00000409854 EPHX2P34913 555 aa6.27□□□□□ -1.41
EPHA4-202ENST00000409854 LONP1P36776 959 aaKnown RBP6.27□□□□□ -1.41
EPHA4-202ENST00000409854 GHRHRQ02643 423 aa6.27□□□□□ -1.41
EPHA4-202ENST00000409854 ZYXQ15942 572 aaKnown RBP6.27□□□□□ -1.41
EPHA4-202ENST00000409854 GPR162Q16538 588 aa6.27□□□□□ -1.41
EPHA4-202ENST00000409854 JAKMIP3Q5VZ66 844 aa6.27□□□□□ -1.41
EPHA4-202ENST00000409854 PPP4R3AQ6IN85 833 aa6.27□□□□□ -1.41
EPHA4-202ENST00000409854 ZNF280CQ8ND82 737 aa6.27□□□□□ -1.41
EPHA4-202ENST00000409854 ZKSCAN4Q969J2 545 aaPredicted RBP6.27□□□□□ -1.41
EPHA4-202ENST00000409854 TMEM60Q9H2L4 133 aa6.27□□□□□ -1.41
EPHA4-202ENST00000409854 FAM13BQ9NYF5 915 aa6.27□□□□□ -1.41
EPHA4-202ENST00000409854 LOXHD1Q8IVV2 1947 aa6.27□□□□□ -1.41
EPHA4-202ENST00000409854 ADM5C9JUS6 153 aa6.27□□□□□ -1.41
EPHA4-202ENST00000409854 VCAM1P19320 739 aa6.27□□□□□ -1.41
EPHA4-202ENST00000409854 BACE1P56817 501 aa6.27□□□□□ -1.41
EPHA4-202ENST00000409854 SNAP25P60880 206 aa6.27□□□□□ -1.41
EPHA4-202ENST00000409854 TYRO3Q06418 890 aa6.27□□□□□ -1.41
EPHA4-202ENST00000409854 IKQ13123 557 aaPredicted RBP6.27□□□□□ -1.41
EPHA4-202ENST00000409854 MTMR2Q13614 643 aa6.27□□□□□ -1.41
EPHA4-202ENST00000409854 UBE2SQ16763 222 aa6.27□□□□□ -1.41
EPHA4-202ENST00000409854 SH3D19Q5HYK7 790 aa6.27□□□□□ -1.41
EPHA4-202ENST00000409854 MOXD1Q6UVY6 613 aa6.27□□□□□ -1.41
EPHA4-202ENST00000409854 KRBA2Q6ZNG9 492 aa6.27□□□□□ -1.41
EPHA4-202ENST00000409854 DHX37Q8IY37 1157 aaKnown RBP6.27□□□□□ -1.41
EPHA4-202ENST00000409854 MBOAT7Q96N66 472 aa6.27□□□□□ -1.41
EPHA4-202ENST00000409854 NAP1L4Q99733 375 aaKnown RBP6.27□□□□□ -1.41
EPHA4-202ENST00000409854 PICK1Q9NRD5 415 aa6.27□□□□□ -1.41
EPHA4-202ENST00000409854 SNCAIPQ9Y6H5 919 aa6.27□□□□□ -1.41
EPHA4-202ENST00000409854 ZNF536O15090 1300 aa6.27□□□□□ -1.41
EPHA4-202ENST00000409854 ABCB11O95342 1321 aa6.27□□□□□ -1.41
EPHA4-202ENST00000409854 C19orf81C9J6K1 198 aa6.27□□□□□ -1.41
EPHA4-202ENST00000409854 ACTN4O43707 911 aaKnown RBP6.27□□□□□ -1.41
EPHA4-202ENST00000409854 MDM2Q00987 491 aaPredicted RBP6.27□□□□□ -1.41
EPHA4-202ENST00000409854 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.27□□□□□ -1.41
EPHA4-202ENST00000409854 USP49Q70CQ1 688 aa6.27□□□□□ -1.41
EPHA4-202ENST00000409854 SULF1Q8IWU6 871 aa6.27□□□□□ -1.41
EPHA4-202ENST00000409854 CKAP2LQ8IYA6 745 aa6.27□□□□□ -1.41
EPHA4-202ENST00000409854 PRPF38AQ8NAV1 312 aaKnown RBP6.27□□□□□ -1.41
EPHA4-202ENST00000409854 SYMPKQ92797 1274 aaKnown RBP6.27□□□□□ -1.41
EPHA4-202ENST00000409854 MTMR9Q96QG7 549 aa6.27□□□□□ -1.41
EPHA4-202ENST00000409854 P2RX7Q99572 595 aaKnown RBP6.27□□□□□ -1.41
EPHA4-202ENST00000409854 SLF1Q9BQI6 1058 aa6.27□□□□□ -1.41
EPHA4-202ENST00000409854 TAF1DQ9H5J8 278 aaPredicted RBP6.27□□□□□ -1.41
EPHA4-202ENST00000409854 FBXO28Q9NVF7 368 aa6.27□□□□□ -1.41
EPHA4-202ENST00000409854 TUBE1Q9UJT0 475 aa6.27□□□□□ -1.41
EPHA4-202ENST00000409854 FZD1Q9UP38 647 aa6.27□□□□□ -1.41
EPHA4-202ENST00000409854 AFG3L2Q9Y4W6 797 aa6.27□□□□□ -1.41
EPHA4-202ENST00000409854 LRRC37A2A6NM11 1700 aa6.26□□□□□ -1.41
EPHA4-202ENST00000409854 CYP3A7-CYP3A51PA0A087WV96 503 aa6.26□□□□□ -1.41
EPHA4-202ENST00000409854 A0A087X0B3 334 aa6.26□□□□□ -1.41
EPHA4-202ENST00000409854 VWA3AA6NCI4 1184 aa6.26□□□□□ -1.41
EPHA4-202ENST00000409854 IQCA1LA6NCM1 817 aa6.26□□□□□ -1.41
EPHA4-202ENST00000409854 NEMFO60524 1076 aa6.26□□□□□ -1.41
EPHA4-202ENST00000409854 CCNT1O60563 726 aaKnown RBP6.26□□□□□ -1.41
EPHA4-202ENST00000409854 FOSP01100 380 aaPredicted RBP6.26□□□□□ -1.41
EPHA4-202ENST00000409854 ICAM1P05362 532 aa6.26□□□□□ -1.41
EPHA4-202ENST00000409854 OR52Z1P0C646 297 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms